Simotinib_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Simotinib perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Simotinib_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.154562
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.13143
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.125423
NLGN1 neuroligin 1 0.112342
DST dystonin 0.106948
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.103335
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0991113
ERRFI1 ERBB receptor feedback inhibitor 1 0.0955477
TENM3 teneurin transmembrane protein 3 0.088255
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0879614
TXNRD1 thioredoxin reductase 1 0.0871418
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0828599
ZBTB20 zinc finger and BTB domain containing 20 0.0771395
TMEM41B transmembrane protein 41B 0.0771154
ANKRD12 ankyrin repeat domain 12 0.0750217
SLC38A2 solute carrier family 38, member 2 0.0744112
VIM vimentin 0.0736826
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0729875
BIRC6 baculoviral IAP repeat containing 6 0.066581
NEK7 NIMA-related kinase 7 0.065101
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0649363
BIRC3 baculoviral IAP repeat containing 3 0.0632218
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0604943
PDE4D phosphodiesterase 4D, cAMP-specific 0.0601345
PGK1 phosphoglycerate kinase 1 0.0584875
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0579447
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0570162
EIF1 eukaryotic translation initiation factor 1 0.0566484
PUM2 pumilio RNA-binding family member 2 0.05649
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.05618
SMYD3 SET and MYND domain containing 3 0.0543087
EPHA6 EPH receptor A6 0.0534765
GJA1 gap junction protein, alpha 1, 43kDa 0.0523187
ZNF292 zinc finger protein 292 0.0519455
PCBP2 poly(rC) binding protein 2 0.0506915
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0505286
MMP12 matrix metallopeptidase 12 0.0494111
ANXA1 annexin A1 0.0492654
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0490138
KIF5B kinesin family member 5B 0.0486731
LDHA lactate dehydrogenase A 0.0485173
FXR1 fragile X mental retardation, autosomal homolog 1 0.0480282
DTNA dystrobrevin, alpha 0.0479991
USP34 ubiquitin specific peptidase 34 0.047762
TBC1D5 TBC1 domain family, member 5 0.0475423
CARD16 caspase recruitment domain family, member 16 0.0474812
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.0468613
PDE4B phosphodiesterase 4B, cAMP-specific 0.0440009
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0437887
YEATS2 YEATS domain containing 2 0.0431585
CXADR coxsackie virus and adenovirus receptor 0.0430275
NEBL nebulette 0.0429561
EGLN1 egl-9 family hypoxia-inducible factor 1 0.042665
TPR translocated promoter region, nuclear basket protein 0.04035
ERBB4 erb-b2 receptor tyrosine kinase 4 0.039414
RAD51B RAD51 paralog B 0.0389285
EHBP1 EH domain binding protein 1 0.0387246
WNK1 WNK lysine deficient protein kinase 1 0.0378074
BCAS3 breast carcinoma amplified sequence 3 0.0375737
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0373807
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0366824
CPOX coproporphyrinogen oxidase 0.0366042
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0365212
TAS2R14 taste receptor, type 2, member 14 0.0361137
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0359825
ADGRG6 adhesion G protein-coupled receptor G6 0.0358811
CAND1 cullin-associated and neddylation-dissociated 1 0.0353834
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0347612
TRA2B transformer 2 beta homolog (Drosophila) 0.0345347
LMO7 LIM domain 7 0.034462
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.034308
RSRC1 arginine/serine-rich coiled-coil 1 0.034289
NR5A2 nuclear receptor subfamily 5, group A, member 2 0.034278
ECT2 epithelial cell transforming 2 0.0337436
NIPBL Nipped-B homolog (Drosophila) 0.0336352
RPLP0 ribosomal protein, large, P0 0.0332628
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.032947
ATP11A ATPase, class VI, type 11A 0.0328335
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.0327401
TNPO1 transportin 1 0.0324187
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 0.0322133
KIAA1328 KIAA1328 0.0316878
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 0.031659
EPHA5 EPH receptor A5 0.0315848
FER fer (fps/fes related) tyrosine kinase 0.0315813
CEP192 centrosomal protein 192kDa 0.0315297
NF1 neurofibromin 1 0.0315161
EXOC6B exocyst complex component 6B 0.0312167
IL6ST interleukin 6 signal transducer 0.0311982
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.03118
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0310702
SMC4 structural maintenance of chromosomes 4 0.0310086
NAMPT nicotinamide phosphoribosyltransferase 0.0309193
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0309028
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0308454
ARHGAP12 Rho GTPase activating protein 12 0.0308365
MBD5 methyl-CpG binding domain protein 5 0.0308332
TMEM123 transmembrane protein 123 0.0305886
PREPL prolyl endopeptidase-like 0.0305674
GABARAPL1 GABA(A) receptor-associated protein like 1 0.0303515

decreased expression

Symbol Name Standardized Value
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.100827
TMSB10 thymosin beta 10 -0.0915769
PTMA prothymosin, alpha -0.0832708
HMGA2 high mobility group AT-hook 2 -0.0770934
CALR calreticulin -0.0464442
RAB7A RAB7A, member RAS oncogene family -0.0386742
FTL ferritin, light polypeptide -0.0362836
TPT1 tumor protein, translationally-controlled 1 -0.0334296
ASPH aspartate beta-hydroxylase -0.0331705
LOC102724023 ES1 protein homolog, mitochondrial -0.0320842
INTS6 integrator complex subunit 6 -0.0310864
EGR1 early growth response 1 -0.0290533
RPL35A ribosomal protein L35a -0.0287032
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0283717
IFIH1 interferon induced with helicase C domain 1 -0.0269917
ZNF804A zinc finger protein 804A -0.0256869
CSMD3 CUB and Sushi multiple domains 3 -0.0255038
TBCA tubulin folding cofactor A -0.0250328
LRRC23 leucine rich repeat containing 23 -0.0237072
ACTG1 actin gamma 1 -0.0235075
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0234477
HMGB1 high mobility group box 1 -0.0233361
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0225351
GNAS GNAS complex locus -0.0215531
S100A10 S100 calcium binding protein A10 -0.0212631
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0207431
ADIPOR2 adiponectin receptor 2 -0.0204274
RPS19 ribosomal protein S19 -0.0192405
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0189998
YBX3 Y box binding protein 3 -0.0187555
RPS25 ribosomal protein S25 -0.0178011
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0172106
CUX1 cut-like homeobox 1 -0.0171965
ANKRD11 ankyrin repeat domain 11 -0.0168645
GCG glucagon -0.01646
MYPN myopalladin -0.0164222
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) -0.0163576
YBX1 Y box binding protein 1 -0.0158564
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.015826
KHSRP KH-type splicing regulatory protein -0.015767
ASXL1 additional sex combs like transcriptional regulator 1 -0.0157096
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0155771
RSU1 Ras suppressor protein 1 -0.015489
TIMP2 TIMP metallopeptidase inhibitor 2 -0.015386
RPL34 ribosomal protein L34 -0.0152275
NAV3 neuron navigator 3 -0.0151115
ADD2 adducin 2 (beta) -0.0150787
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0145714
NHSL1 NHS-like 1 -0.014394
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.014302
RPLP2 ribosomal protein, large, P2 -0.0142471
TCF20 transcription factor 20 (AR1) -0.0139327
ASXL2 additional sex combs like transcriptional regulator 2 -0.0138697
RPS23 ribosomal protein S23 -0.0138302
MYL12B myosin, light chain 12B, regulatory -0.0138123
MAP4 microtubule-associated protein 4 -0.0137702
PRIM2 primase, DNA, polypeptide 2 (58kDa) -0.0136926
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0135853
TUBA1B tubulin, alpha 1b -0.0131863
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0131433
RPL36 ribosomal protein L36 -0.0131113
JUN jun proto-oncogene -0.0129832
STAU1 staufen double-stranded RNA binding protein 1 -0.0129385
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase -0.0127989
PDCD6 programmed cell death 6 -0.0127865
CALD1 caldesmon 1 -0.0126073
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0124072
RPS24 ribosomal protein S24 -0.012308
HMGA1 high mobility group AT-hook 1 -0.0122668
PHACTR4 phosphatase and actin regulator 4 -0.0121554
CFAP70 cilia and flagella associated protein 70 -0.0121531
TGM2 transglutaminase 2 -0.012087
DGKH diacylglycerol kinase, eta -0.0118627
UNC13A unc-13 homolog A (C. elegans) -0.0117993
PCF11 PCF11 cleavage and polyadenylation factor subunit -0.0116285
MACF1 microtubule-actin crosslinking factor 1 -0.011541
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0115073
FASN fatty acid synthase -0.0114854
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0114351
TCF12 transcription factor 12 -0.0114217
MYOM1 myomesin 1 -0.0114074
FCHSD2 FCH and double SH3 domains 2 -0.0113927
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 -0.0113821
HLCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) -0.0113128
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 -0.0112262
MEF2D myocyte enhancer factor 2D -0.0111263
RBM10 RNA binding motif protein 10 -0.011072
GATAD2B GATA zinc finger domain containing 2B -0.0110542
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 -0.0109832
NOP56 NOP56 ribonucleoprotein -0.0109662
RPL27 ribosomal protein L27 -0.0109469
FRMD5 FERM domain containing 5 -0.0105917
SMIM44 small integral membrane protein 44 -0.0105823
TMEM181 transmembrane protein 181 -0.0105653
DDIT3 DNA-damage-inducible transcript 3 -0.0105374
EIF5B eukaryotic translation initiation factor 5B -0.0105319
FKBP2 FK506 binding protein 2, 13kDa -0.0103297
TCOF1 Treacher Collins-Franceschetti syndrome 1 -0.010294
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) -0.0102119
ANKRD28 ankyrin repeat domain 28 -0.010165