Simotinib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Simotinib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Simotinib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.23763
FAM13A family with sequence similarity 13, member A 0.0980819
MEIS2 Meis homeobox 2 0.0732497
NAMPT nicotinamide phosphoribosyltransferase 0.064398
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0561997
HELZ helicase with zinc finger 0.0556665
NPEPPS aminopeptidase puromycin sensitive 0.0514763
ZNF292 zinc finger protein 292 0.0503029
FNBP1 formin binding protein 1 0.0463849
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0444691
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0430977
ITPRID2 ITPR interacting domain containing 2 0.0411156
GNA13 guanine nucleotide binding protein (G protein), alpha 13 0.0392342
MEF2A myocyte enhancer factor 2A 0.0389669
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0379895
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0378652
SOS1 son of sevenless homolog 1 (Drosophila) 0.0374129
MAP1B microtubule-associated protein 1B 0.0373053
PKM pyruvate kinase, muscle 0.036574
OGA O-GlcNAcase 0.0356602
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0355828
WDR45B WD repeat domain 45B 0.0352329
KDM3A lysine (K)-specific demethylase 3A 0.0346546
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.0338664
KMT2E lysine (K)-specific methyltransferase 2E 0.033262
DTNA dystrobrevin, alpha 0.0323305
CD36 CD36 molecule (thrombospondin receptor) 0.0321058
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0313023
PCBP2 poly(rC) binding protein 2 0.030264
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0301039
MARCHF6 membrane associated ring-CH-type finger 6 0.0295955
ADGRG6 adhesion G protein-coupled receptor G6 0.0292031
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0289897
WAC WW domain containing adaptor with coiled-coil 0.0279409
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0277277
LPIN1 lipin 1 0.0274692
RNF145 ring finger protein 145 0.0265339
USP3 ubiquitin specific peptidase 3 0.0264345
AHCTF1 AT hook containing transcription factor 1 0.0263479
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0258338
SETD5 SET domain containing 5 0.0255372
DDIT4 DNA-damage-inducible transcript 4 0.0253052
INSIG2 insulin induced gene 2 0.0252587
ZNF148 zinc finger protein 148 0.0251098
TENT5A terminal nucleotidyltransferase 5A 0.0247756
NUP58 nucleoporin 58 0.0244823
RFX7 regulatory factor X, 7 0.0242599
NBAS neuroblastoma amplified sequence 0.0239482
DENND4C DENN/MADD domain containing 4C 0.023704
RARA retinoic acid receptor, alpha 0.0235112
NDRG1 N-myc downstream regulated 1 0.0235089
NEK7 NIMA-related kinase 7 0.0234336
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0232304
PTEN phosphatase and tensin homolog 0.0231812
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0229326
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0229012
XPO1 exportin 1 0.022809
PUM2 pumilio RNA-binding family member 2 0.0226728
DSCAM Down syndrome cell adhesion molecule 0.0226195
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.0225808
LCORL ligand dependent nuclear receptor corepressor-like 0.0224842
SBF2 SET binding factor 2 0.0223723
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.022314
RNF150 ring finger protein 150 0.0221008
GARS1 glycyl-tRNA synthetase 1 0.0220851
PDE8A phosphodiesterase 8A 0.02181
ADAM9 ADAM metallopeptidase domain 9 0.0215855
YTHDC1 YTH domain containing 1 0.0214316
PGK1 phosphoglycerate kinase 1 0.0213323
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0211919
SOX9 SRY (sex determining region Y)-box 9 0.0210471
ECT2 epithelial cell transforming 2 0.0210386
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0209462
BRWD1 bromodomain and WD repeat domain containing 1 0.0209219
CENPF centromere protein F, 350/400kDa 0.0205677
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0203938
GOLGA4 golgin A4 0.0203438
TOB1 transducer of ERBB2, 1 0.0200859
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0200359
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 0.0199624
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0198831
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0198083
CHD1 chromodomain helicase DNA binding protein 1 0.0197667
BHLHE40 basic helix-loop-helix family, member e40 0.0197613
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0195575
ESYT2 extended synaptotagmin-like protein 2 0.0193696
SUCO SUN domain containing ossification factor 0.0193087
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0192721
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0192348
ARRDC3 arrestin domain containing 3 0.0191598
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0190218
KCTD3 potassium channel tetramerization domain containing 3 0.018949
NFE2L1 nuclear factor, erythroid 2-like 1 0.0189372
FOXO3 forkhead box O3 0.0188419
USPL1 ubiquitin specific peptidase like 1 0.0188047
AGFG1 ArfGAP with FG repeats 1 0.0186617
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0185353
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0184763
CDC27 cell division cycle 27 0.0181596
RAB21 RAB21, member RAS oncogene family 0.0179341

decreased expression

Symbol Name Standardized Value
NRG1 neuregulin 1 -0.284933
NALF1 NALCN channel auxiliary factor 1 -0.202307
LSAMP limbic system-associated membrane protein -0.191532
VCL vinculin -0.16836
EXT1 exostosin glycosyltransferase 1 -0.13167
PRKCA protein kinase C, alpha -0.125738
PTPRD protein tyrosine phosphatase, receptor type, D -0.102538
IGF2 insulin-like growth factor 2 -0.0979229
ACTG1 actin gamma 1 -0.0941234
THSD4 thrombospondin, type I, domain containing 4 -0.0886156
BCAS3 breast carcinoma amplified sequence 3 -0.0806587
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0758281
GREM2 gremlin 2, DAN family BMP antagonist -0.0678515
CUX1 cut-like homeobox 1 -0.0676405
ZNF804A zinc finger protein 804A -0.0659125
PLAT plasminogen activator, tissue -0.0654796
COL4A5 collagen, type IV, alpha 5 -0.0640989
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0634679
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0621205
PTMA prothymosin, alpha -0.0620695
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0619995
BICD1 bicaudal D homolog 1 (Drosophila) -0.0605262
TPM1 tropomyosin 1 (alpha) -0.0567841
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0560616
TPM4 tropomyosin 4 -0.0560427
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0560371
LPP LIM domain containing preferred translocation partner in lipoma -0.0542176
EGR1 early growth response 1 -0.0534049
MSI2 musashi RNA-binding protein 2 -0.053041
SLIT2 slit homolog 2 (Drosophila) -0.0529049
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0522515
TPT1 tumor protein, translationally-controlled 1 -0.0518465
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0515911
AKAP12 A kinase (PRKA) anchor protein 12 -0.0511547
SYT1 synaptotagmin I -0.0511357
UNC5C unc-5 homolog C (C. elegans) -0.0509676
ANTXR1 anthrax toxin receptor 1 -0.0487246
FRMD4A FERM domain containing 4A -0.0484704
BPTF bromodomain PHD finger transcription factor -0.0484376
VMP1 vacuole membrane protein 1 -0.0481661
IGFBP3 insulin-like growth factor binding protein 3 -0.047744
NREP neuronal regeneration related protein -0.0472114
NPAS2 neuronal PAS domain protein 2 -0.047187
MAML2 mastermind-like 2 (Drosophila) -0.0444772
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0439981
COL1A1 collagen, type I, alpha 1 -0.0433522
CDH13 cadherin 13 -0.0431866
CRH corticotropin releasing hormone -0.0430906
MCL1 myeloid cell leukemia 1 -0.043022
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0429783
MAPK10 mitogen-activated protein kinase 10 -0.0428475
CADM2 cell adhesion molecule 2 -0.0418423
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 -0.0417395
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0400583
RPL35A ribosomal protein L35a -0.0393427
MACF1 microtubule-actin crosslinking factor 1 -0.0393412
CNTN4 contactin 4 -0.0392786
CEMIP cell migration inducing protein, hyaluronan binding -0.0385629
EFNA5 ephrin-A5 -0.0384257
KLHL13 kelch-like family member 13 -0.0374761
CCDC57 coiled-coil domain containing 57 -0.0357738
DLC1 DLC1 Rho GTPase activating protein -0.0355746
COL4A6 collagen, type IV, alpha 6 -0.0352626
RPL23 ribosomal protein L23 -0.0347069
DNM3 dynamin 3 -0.0346414
IER3 immediate early response 3 -0.0345673
PDLIM5 PDZ and LIM domain 5 -0.0339482
TCF12 transcription factor 12 -0.0338482
SP100 SP100 nuclear antigen -0.0336985
PDZRN3 PDZ domain containing ring finger 3 -0.0333799
RPTOR regulatory associated protein of MTOR, complex 1 -0.0332607
RPS24 ribosomal protein S24 -0.0330102
RNF213 ring finger protein 213 -0.0324981
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0324327
PARD3 par-3 family cell polarity regulator -0.0322048
RPLP1 ribosomal protein, large, P1 -0.0320475
ZBTB20 zinc finger and BTB domain containing 20 -0.0318947
VIM vimentin -0.0318319
EGFR epidermal growth factor receptor -0.031798
HMGA2 high mobility group AT-hook 2 -0.0316982
TRIM24 tripartite motif containing 24 -0.0312685
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0306413
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 -0.0305901
HIP1 huntingtin interacting protein 1 -0.0302022
IGFBP5 insulin-like growth factor binding protein 5 -0.0302012
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0299432
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0297497
COL4A2 collagen, type IV, alpha 2 -0.0297478
MYO1E myosin IE -0.0296927
FMN1 formin 1 -0.0294812
COL3A1 collagen, type III, alpha 1 -0.0294349
RPS12 ribosomal protein S12 -0.0290911
KCTD16 potassium channel tetramerization domain containing 16 -0.0290672
GSE1 Gse1 coiled-coil protein -0.028964
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0283462
SMYD3 SET and MYND domain containing 3 -0.0281912
SIK2 salt-inducible kinase 2 -0.0281707
CALD1 caldesmon 1 -0.0276336
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0275867
UBAP2 ubiquitin associated protein 2 -0.0275179