Simotinib_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Simotinib perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Simotinib_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.138915
TRIO trio Rho guanine nucleotide exchange factor 0.135514
COL6A3 collagen, type VI, alpha 3 0.114265
FNDC3B fibronectin type III domain containing 3B 0.112775
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.10634
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.104235
CD44 CD44 molecule (Indian blood group) 0.0980603
FN1 fibronectin 1 0.0977756
FBN1 fibrillin 1 0.0947332
LDHA lactate dehydrogenase A 0.0917291
EXT1 exostosin glycosyltransferase 1 0.0915629
PSD3 pleckstrin and Sec7 domain containing 3 0.0845744
PRELID2 PRELI domain containing 2 0.0839926
ZBTB20 zinc finger and BTB domain containing 20 0.081895
TIMP3 TIMP metallopeptidase inhibitor 3 0.0792661
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0737318
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0713138
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0666885
PDE10A phosphodiesterase 10A 0.0622663
IGFBP3 insulin-like growth factor binding protein 3 0.0618654
DST dystonin 0.0596499
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0581873
ENO1 enolase 1, (alpha) 0.0563893
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0523178
CDH13 cadherin 13 0.0509106
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0501711
VCAN versican 0.0481134
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.048008
ERRFI1 ERBB receptor feedback inhibitor 1 0.0478491
LPP LIM domain containing preferred translocation partner in lipoma 0.0464136
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0461489
IL6ST interleukin 6 signal transducer 0.0455034
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0453916
LTBP1 latent transforming growth factor beta binding protein 1 0.0438345
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0422157
NAV1 neuron navigator 1 0.0421895
EGFR epidermal growth factor receptor 0.0414777
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0414297
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0414051
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0400273
SMYD3 SET and MYND domain containing 3 0.0398581
SDC2 syndecan 2 0.0398274
PGK1 phosphoglycerate kinase 1 0.0380044
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0378972
MAP1B microtubule-associated protein 1B 0.0378422
FER fer (fps/fes related) tyrosine kinase 0.0373592
TGFBI transforming growth factor, beta-induced, 68kDa 0.0373504
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0362328
MBNL1 muscleblind-like splicing regulator 1 0.0359734
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.0359692
RUNX1 runt-related transcription factor 1 0.035032
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0349814
PKM pyruvate kinase, muscle 0.034792
POSTN periostin, osteoblast specific factor 0.0341223
ASPH aspartate beta-hydroxylase 0.0336011
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0326686
ALCAM activated leukocyte cell adhesion molecule 0.0324231
CPQ carboxypeptidase Q 0.0320724
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.031931
HAS2 hyaluronan synthase 2 0.0316557
CD109 CD109 molecule 0.0313535
DPYSL3 dihydropyrimidinase-like 3 0.0313161
DPYD dihydropyrimidine dehydrogenase 0.0311587
SBF2 SET binding factor 2 0.0311134
RAD51B RAD51 paralog B 0.0309282
PDLIM5 PDZ and LIM domain 5 0.0309025
ATXN1 ataxin 1 0.0305868
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0300008
SEC24A SEC24 family member A 0.0299425
NAV2 neuron navigator 2 0.0298786
CNTN5 contactin 5 0.0296823
ATP13A3 ATPase type 13A3 0.0296642
B2M beta-2-microglobulin 0.0295626
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0291295
FBXL7 F-box and leucine-rich repeat protein 7 0.0289632
COL5A1 collagen, type V, alpha 1 0.0287391
DLG1 discs, large homolog 1 (Drosophila) 0.0285027
WWTR1 WW domain containing transcription regulator 1 0.0282368
VCL vinculin 0.0280876
MYH9 myosin, heavy chain 9, non-muscle 0.0280377
TENM3 teneurin transmembrane protein 3 0.0276406
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0274892
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0271824
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0267536
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0264473
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0264122
YEATS2 YEATS domain containing 2 0.0261775
CENPF centromere protein F, 350/400kDa 0.0261707
ANKRD12 ankyrin repeat domain 12 0.0261247
F3 coagulation factor III (thromboplastin, tissue factor) 0.0258869
SMC4 structural maintenance of chromosomes 4 0.0251967
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0250528
RICTOR RPTOR independent companion of MTOR, complex 2 0.0248733
SMAD3 SMAD family member 3 0.0248486
MYOF myoferlin 0.0247216
MYO1E myosin IE 0.0246795
LMAN1 lectin, mannose-binding, 1 0.0245865
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0244145
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0242539
TPI1 triosephosphate isomerase 1 0.0241511

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.118477
NDRG1 N-myc downstream regulated 1 -0.0990535
FTH1 ferritin, heavy polypeptide 1 -0.0470863
PTMA prothymosin, alpha -0.0349751
TMSB10 thymosin beta 10 -0.0339745
CALR calreticulin -0.0335673
NAMPT nicotinamide phosphoribosyltransferase -0.0332168
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0315401
RPL35A ribosomal protein L35a -0.0300919
ANKRD11 ankyrin repeat domain 11 -0.0291174
RPL28 ribosomal protein L28 -0.0247653
TPT1 tumor protein, translationally-controlled 1 -0.0241399
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0220028
COL1A1 collagen, type I, alpha 1 -0.0215121
ICAM1 intercellular adhesion molecule 1 -0.0205063
YBX1 Y box binding protein 1 -0.0202112
TFG TRK-fused gene -0.0193232
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.018948
SOD2 superoxide dismutase 2, mitochondrial -0.0177187
IER3 immediate early response 3 -0.0174715
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.0170435
IL6 interleukin 6 -0.0170105
ZFAND3 zinc finger, AN1-type domain 3 -0.0169789
PLEC plectin -0.0167488
COL3A1 collagen, type III, alpha 1 -0.0167399
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0166315
WSB1 WD repeat and SOCS box containing 1 -0.016531
RPS12 ribosomal protein S12 -0.0160151
RPL34 ribosomal protein L34 -0.0158956
CXCL3 chemokine (C-X-C motif) ligand 3 -0.0158189
RAP1B RAP1B, member of RAS oncogene family -0.014405
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0143545
STC1 stanniocalcin 1 -0.0143431
RLF rearranged L-myc fusion -0.0140246
VEGFA vascular endothelial growth factor A -0.013978
RPS3 ribosomal protein S3 -0.0139657
RPS2 ribosomal protein S2 -0.0135514
RPL5 ribosomal protein L5 -0.013408
EEF2 eukaryotic translation elongation factor 2 -0.0131273
CSDE1 cold shock domain containing E1, RNA-binding -0.0129921
RRBP1 ribosome binding protein 1 -0.0128517
RPL13A ribosomal protein L13a -0.0128244
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0127249
RHEB Ras homolog enriched in brain -0.0126666
FTL ferritin, light polypeptide -0.0125406
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0124845
GPBP1L1 GC-rich promoter binding protein 1-like 1 -0.0123617
TAPBP TAP binding protein (tapasin) -0.0123056
RAB7A RAB7A, member RAS oncogene family -0.0122361
SRGN serglycin -0.0122073
SAFB2 scaffold attachment factor B2 -0.0121781
CCNY cyclin Y -0.0121695
GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 -0.0120534
ATF4 activating transcription factor 4 -0.0119356
RSRC2 arginine/serine-rich coiled-coil 2 -0.0118964
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0117366
RPS25 ribosomal protein S25 -0.0116365
LAMA5 laminin, alpha 5 -0.0115208
CYB5R3 cytochrome b5 reductase 3 -0.0114021
USP3 ubiquitin specific peptidase 3 -0.0113628
SQLE squalene epoxidase -0.0112404
FOSL1 FOS-like antigen 1 -0.0111468
QKI QKI, KH domain containing, RNA binding -0.0110751
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0110491
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0109396
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0108727
FBXO42 F-box protein 42 -0.0107917
RNF168 ring finger protein 168, E3 ubiquitin protein ligase -0.010759
CBFB core-binding factor, beta subunit -0.0107356
AP3D1 adaptor-related protein complex 3, delta 1 subunit -0.0107103
RHOA ras homolog family member A -0.0105673
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 -0.0105526
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0105443
LAMB3 laminin, beta 3 -0.0105148
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.010503
RPS24 ribosomal protein S24 -0.0104604
TRPS1 trichorhinophalangeal syndrome I -0.01044
HYOU1 hypoxia up-regulated 1 -0.0104219
PFN1 profilin 1 -0.0103343
TM4SF1 transmembrane 4 L six family member 1 -0.0103052
MAP4 microtubule-associated protein 4 -0.0102967
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0102121
CLASRP CLK4-associating serine/arginine rich protein -0.0101548
SEC61G Sec61 gamma subunit -0.0100673
STRN3 striatin, calmodulin binding protein 3 -0.00971554
HMGA2 high mobility group AT-hook 2 -0.0097019
ARHGAP35 Rho GTPase activating protein 35 -0.00968508
SDC4 syndecan 4 -0.0096761
SAFB scaffold attachment factor B -0.00966665
CLMP CXADR-like membrane protein -0.00965483
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.00965006
RPL26 ribosomal protein L26 -0.009642
KAZN kazrin, periplakin interacting protein -0.00951781
BMERB1 bMERB domain containing 1 -0.0094288
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.00940092
SELENOF selenoprotein F -0.00937213
TENT4A terminal nucleotidyltransferase 4A -0.00934866
COG5 component of oligomeric golgi complex 5 -0.0093338
STAU1 staufen double-stranded RNA binding protein 1 -0.00910185
CFB complement factor B -0.00910182