Simotinib_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Simotinib perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Simotinib_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.155795
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.126348
CENPF centromere protein F, 350/400kDa 0.109192
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.10699
SLC38A2 solute carrier family 38, member 2 0.101931
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0891521
POTEF POTE ankyrin domain family, member F 0.0853546
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0844458
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0822974
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0791395
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0767398
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0756977
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0724585
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0711745
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0701248
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0699311
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0663371
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0628767
GARS1 glycyl-tRNA synthetase 1 0.0582625
MKI67 marker of proliferation Ki-67 0.0571649
JMJD1C jumonji domain containing 1C 0.0545673
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0514665
KMT2E lysine (K)-specific methyltransferase 2E 0.0494917
RTN4 reticulon 4 0.0489684
BIRC6 baculoviral IAP repeat containing 6 0.0484086
RTTN rotatin 0.047922
TM4SF1 transmembrane 4 L six family member 1 0.0478269
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0473929
EGR1 early growth response 1 0.0458918
SRPK2 SRSF protein kinase 2 0.0458658
USP34 ubiquitin specific peptidase 34 0.0458601
ADGRG6 adhesion G protein-coupled receptor G6 0.0453249
ADAM17 ADAM metallopeptidase domain 17 0.0443424
FNIP1 folliculin interacting protein 1 0.0436397
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0427848
SMC4 structural maintenance of chromosomes 4 0.0425633
NUP58 nucleoporin 58 0.042555
DIAPH3 diaphanous-related formin 3 0.0415212
TRIP12 thyroid hormone receptor interactor 12 0.0414603
ZEB1 zinc finger E-box binding homeobox 1 0.0414058
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.041398
TOP1 topoisomerase (DNA) I 0.0411035
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0409257
RAI1 retinoic acid induced 1 0.0400839
TMEM41B transmembrane protein 41B 0.0399439
SON SON DNA binding protein 0.03955
ANKRD11 ankyrin repeat domain 11 0.0385916
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0379071
KMT2C lysine (K)-specific methyltransferase 2C 0.0377024
ANLN anillin, actin binding protein 0.0376726
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0376667
ERRFI1 ERBB receptor feedback inhibitor 1 0.0371865
LDHA lactate dehydrogenase A 0.0371286
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0368273
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0363609
RCOR1 REST corepressor 1 0.0356447
CSNK1A1 casein kinase 1, alpha 1 0.0354376
MATR3 matrin 3 0.0353547
PKM pyruvate kinase, muscle 0.0350193
ETNK1 ethanolamine kinase 1 0.0339624
ECT2 epithelial cell transforming 2 0.0336883
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0336758
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0336569
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0336463
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0332263
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0328927
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.032874
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.032833
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0327562
SBF2 SET binding factor 2 0.0325556
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0323793
ZNF292 zinc finger protein 292 0.0322648
GOLGA4 golgin A4 0.0320348
MIS18BP1 MIS18 binding protein 1 0.0320312
ERBIN erbb2 interacting protein 0.0320169
LOC112694756 uncharaterized LOC112694756 0.0319995
SGO2 shugoshin 2 0.031908
GSK3B glycogen synthase kinase 3 beta 0.0315451
PUM2 pumilio RNA-binding family member 2 0.0314983
PGK1 phosphoglycerate kinase 1 0.0314838
MSN moesin 0.0314267
SFPQ splicing factor proline/glutamine-rich 0.0312198
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0301151
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0300021
SPAG9 sperm associated antigen 9 0.0297432
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0296884
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0296777
PDIA6 protein disulfide isomerase family A, member 6 0.0292672
TRA2B transformer 2 beta homolog (Drosophila) 0.0292629
ANKRD12 ankyrin repeat domain 12 0.0292017
NIPBL Nipped-B homolog (Drosophila) 0.0291001
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.029007
TPX2 TPX2, microtubule-associated 0.0289062
FXR1 fragile X mental retardation, autosomal homolog 1 0.0288882
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0287092
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0286135
HJURP Holliday junction recognition protein 0.0281484
ARHGAP29 Rho GTPase activating protein 29 0.0280337
RRM2 ribonucleotide reductase M2 0.0280314
EEF2 eukaryotic translation elongation factor 2 0.0278817

decreased expression

Symbol Name Standardized Value
TP63 tumor protein p63 -0.182981
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.134406
HLA-B major histocompatibility complex, class I, B -0.133722
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.112161
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0984373
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0916728
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0905975
CADM2 cell adhesion molecule 2 -0.0855205
CD44 CD44 molecule (Indian blood group) -0.0837306
TNS3 tensin 3 -0.0804067
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0771997
RIGI RNA sensor RIG-I -0.0765276
TPT1 tumor protein, translationally-controlled 1 -0.0711232
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0705163
VIM vimentin -0.0679666
PTMA prothymosin, alpha -0.0653268
EFNA5 ephrin-A5 -0.0598689
RNF213 ring finger protein 213 -0.0587343
EPHA4 EPH receptor A4 -0.0585361
MT2A metallothionein 2A -0.057446
DNER delta/notch-like EGF repeat containing -0.0554111
RPS6 ribosomal protein S6 -0.0553644
RPL35A ribosomal protein L35a -0.0540931
RPL36 ribosomal protein L36 -0.0533655
WSB1 WD repeat and SOCS box containing 1 -0.0512709
FTL ferritin, light polypeptide -0.0503934
DST dystonin -0.0494968
RPL37A ribosomal protein L37a -0.0484783
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0475531
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0472615
SP100 SP100 nuclear antigen -0.0470835
RPS19 ribosomal protein S19 -0.0467564
FTH1 ferritin, heavy polypeptide 1 -0.0459379
IFIH1 interferon induced with helicase C domain 1 -0.045626
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0454356
TRIM56 tripartite motif containing 56 -0.0448885
TMSB4X thymosin beta 4, X-linked -0.0446918
RPL31 ribosomal protein L31 -0.0444629
RPL36A ribosomal protein L36a -0.0420666
AHNAK2 AHNAK nucleoprotein 2 -0.042049
HDAC9 histone deacetylase 9 -0.0418903
RPL26 ribosomal protein L26 -0.0415037
SOD2 superoxide dismutase 2, mitochondrial -0.0402702
HLA-E major histocompatibility complex, class I, E -0.0398489
TMSB10 thymosin beta 10 -0.0396263
PDE10A phosphodiesterase 10A -0.0391317
RPS8 ribosomal protein S8 -0.038884
CSMD3 CUB and Sushi multiple domains 3 -0.0373859
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0363875
RPL37 ribosomal protein L37 -0.035931
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0354887
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.034864
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 -0.0342152
CLIP2 CAP-GLY domain containing linker protein 2 -0.0334892
RPL12 ribosomal protein L12 -0.0326662
RPS3 ribosomal protein S3 -0.0322342
PTPRF protein tyrosine phosphatase, receptor type, F -0.0318026
RPS27A ribosomal protein S27a -0.0311985
PSD3 pleckstrin and Sec7 domain containing 3 -0.0307993
RPLP1 ribosomal protein, large, P1 -0.0298708
ENOSF1 enolase superfamily member 1 -0.0292089
NPAS2 neuronal PAS domain protein 2 -0.0290036
RPL38 ribosomal protein L38 -0.028963
SDK1 sidekick cell adhesion molecule 1 -0.0288327
ZMYND8 zinc finger, MYND-type containing 8 -0.0279837
DNAH14 dynein, axonemal, heavy chain 14 -0.0271732
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0269981
LPP LIM domain containing preferred translocation partner in lipoma -0.0267521
RPS29 ribosomal protein S29 -0.0265932
ARHGAP5 Rho GTPase activating protein 5 -0.0265898
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0259644
STAT1 signal transducer and activator of transcription 1, 91kDa -0.025857
ECE1 endothelin converting enzyme 1 -0.0253759
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0250135
RPLP2 ribosomal protein, large, P2 -0.0245244
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.024452
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0241608
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0240947
RPL35 ribosomal protein L35 -0.0238393
APP amyloid beta (A4) precursor protein -0.0238247
RPL28 ribosomal protein L28 -0.0236578
PLSCR1 phospholipid scramblase 1 -0.0236284
B2M beta-2-microglobulin -0.0231154
ARL4C ADP-ribosylation factor-like 4C -0.022992
ANGPTL4 angiopoietin-like 4 -0.0229039
RPS27 ribosomal protein S27 -0.0225344
CFAP299 cilia and flagella associated protein 299 -0.0224979
AMPD3 adenosine monophosphate deaminase 3 -0.0224619
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide -0.0222382
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0221238
SLC38A1 solute carrier family 38, member 1 -0.0219921
EGFR epidermal growth factor receptor -0.0213934
CFLAR CASP8 and FADD-like apoptosis regulator -0.0213762
DPH6 diphthamine biosynthesis 6 -0.0213143
RPL7A ribosomal protein L7a -0.021192
NPEPPS aminopeptidase puromycin sensitive -0.0210566
TGM2 transglutaminase 2 -0.0209602
IFITM1 interferon induced transmembrane protein 1 -0.0209459
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0209059
MTCL1 microtubule crosslinking factor 1 -0.0208273