Simotinib_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Simotinib perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Simotinib_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.31044
GRAMD1B GRAM domain containing 1B 0.181923
VIM vimentin 0.134485
TXNRD1 thioredoxin reductase 1 0.106497
PABPC1 poly(A) binding protein, cytoplasmic 1 0.103926
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.102929
TM4SF1 transmembrane 4 L six family member 1 0.101652
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0982423
NCEH1 neutral cholesterol ester hydrolase 1 0.0916717
BIRC3 baculoviral IAP repeat containing 3 0.0818332
FGB fibrinogen beta chain 0.0794281
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0791608
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0771862
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0754204
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0745447
PDE4D phosphodiesterase 4D, cAMP-specific 0.0718104
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0709111
PKM pyruvate kinase, muscle 0.0672292
MT2A metallothionein 2A 0.0661124
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0661051
CXCL8 chemokine (C-X-C motif) ligand 8 0.065603
TFPI2 tissue factor pathway inhibitor 2 0.0645613
RPL4 ribosomal protein L4 0.0591437
ADGRG6 adhesion G protein-coupled receptor G6 0.0590756
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0472845
WWOX WW domain containing oxidoreductase 0.0471853
RTN4 reticulon 4 0.0470447
FGG fibrinogen gamma chain 0.0451532
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0450555
KIF5B kinesin family member 5B 0.0445554
MKI67 marker of proliferation Ki-67 0.0443528
AHR aryl hydrocarbon receptor 0.044229
NAMPT nicotinamide phosphoribosyltransferase 0.0423277
ENO1 enolase 1, (alpha) 0.0417129
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0416661
USP3 ubiquitin specific peptidase 3 0.0400282
DGKD diacylglycerol kinase, delta 130kDa 0.038786
KPNB1 karyopherin (importin) beta 1 0.0385861
TPM3 tropomyosin 3 0.0374364
TTC28 tetratricopeptide repeat domain 28 0.0372183
TUBB tubulin, beta class I 0.037175
RAD21 RAD21 homolog (S. pombe) 0.0370238
TMEM123 transmembrane protein 123 0.0367446
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0364949
ANKRD28 ankyrin repeat domain 28 0.0364309
NNMT nicotinamide N-methyltransferase 0.036201
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0361346
SP3 Sp3 transcription factor 0.0361277
PRR16 proline rich 16 0.0359112
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0346565
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.0344688
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0334618
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0328307
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0327493
ECT2 epithelial cell transforming 2 0.0326017
NPC1 Niemann-Pick disease, type C1 0.0323085
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0319163
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0317897
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0316458
RPL7 ribosomal protein L7 0.0314454
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0313525
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0312918
BICC1 BicC family RNA binding protein 1 0.031249
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0310543
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0307079
NCOA7 nuclear receptor coactivator 7 0.0304403
KMT2E lysine (K)-specific methyltransferase 2E 0.0304273
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) 0.0302708
ANLN anillin, actin binding protein 0.030044
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae) 0.0299828
FHIT fragile histidine triad 0.0294047
MATR3 matrin 3 0.0291449
LDHA lactate dehydrogenase A 0.028747
PDIA3 protein disulfide isomerase family A, member 3 0.0287301
BZW1 basic leucine zipper and W2 domains 1 0.0285525
SQSTM1 sequestosome 1 0.0285291
RRM2 ribonucleotide reductase M2 0.0284164
NAP1L1 nucleosome assembly protein 1-like 1 0.0282746
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0282646
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0278346
ENAH enabled homolog (Drosophila) 0.0273035
ZNF292 zinc finger protein 292 0.0272687
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0272451
KDM3A lysine (K)-specific demethylase 3A 0.026919
DST dystonin 0.0268233
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0265853
EYA4 EYA transcriptional coactivator and phosphatase 4 0.0263477
ERH enhancer of rudimentary homolog (Drosophila) 0.0262239
MYOF myoferlin 0.0259917
NRP1 neuropilin 1 0.025605
EFNA5 ephrin-A5 0.0253101
PDS5A PDS5 cohesin associated factor A 0.0250831
GPC6 glypican 6 0.0250795
XPO1 exportin 1 0.0249956
IFNAR2 interferon (alpha, beta and omega) receptor 2 0.0246411
TRIP12 thyroid hormone receptor interactor 12 0.0246311
THBS1 thrombospondin 1 0.0245546
TNPO1 transportin 1 0.024517
ZFR zinc finger RNA binding protein 0.0244025
QKI QKI, KH domain containing, RNA binding 0.0243797

decreased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.144089
TMSB10 thymosin beta 10 -0.132721
KYNU kynureninase -0.0812402
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0772813
DSCAM Down syndrome cell adhesion molecule -0.0693265
CMIP c-Maf inducing protein -0.0684
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0596287
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0579175
ANKRD11 ankyrin repeat domain 11 -0.0547044
IGFBP3 insulin-like growth factor binding protein 3 -0.0539215
FTH1 ferritin, heavy polypeptide 1 -0.04949
RAB7A RAB7A, member RAS oncogene family -0.0462365
SAMD4A sterile alpha motif domain containing 4A -0.0460678
EGFR epidermal growth factor receptor -0.0441038
EGR1 early growth response 1 -0.0436732
RBM25 RNA binding motif protein 25 -0.0420875
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0412234
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.040729
GLIS3 GLIS family zinc finger 3 -0.0401472
DENND4A DENN/MADD domain containing 4A -0.0389524
SMOC1 SPARC related modular calcium binding 1 -0.0388497
PTK2 protein tyrosine kinase 2 -0.0382429
RPL31 ribosomal protein L31 -0.0375076
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0352271
COPA coatomer protein complex, subunit alpha -0.0345623
RPL36 ribosomal protein L36 -0.0339174
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0331486
FTL ferritin, light polypeptide -0.0330869
ELL2 elongation factor, RNA polymerase II, 2 -0.032417
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0316196
DOCK5 dedicator of cytokinesis 5 -0.0315534
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0307687
ACTN1 actinin, alpha 1 -0.0306322
INTS6 integrator complex subunit 6 -0.0304182
MSRB3 methionine sulfoxide reductase B3 -0.0298546
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0290809
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0288291
NF1 neurofibromin 1 -0.028752
PUM1 pumilio RNA-binding family member 1 -0.0280076
IER3 immediate early response 3 -0.0278337
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0276654
USP34 ubiquitin specific peptidase 34 -0.0276468
OSMR oncostatin M receptor -0.0276353
HLA-B major histocompatibility complex, class I, B -0.0269794
NLK nemo-like kinase -0.0268548
TIAM2 T-cell lymphoma invasion and metastasis 2 -0.026756
CDK13 cyclin-dependent kinase 13 -0.0264946
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0263564
AKAP13 A kinase (PRKA) anchor protein 13 -0.0262067
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0260982
EEF2 eukaryotic translation elongation factor 2 -0.0260969
THSD4 thrombospondin, type I, domain containing 4 -0.0258564
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0256136
BRD2 bromodomain containing 2 -0.0254058
ATF4 activating transcription factor 4 -0.0253971
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0253136
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0248524
ZFAND3 zinc finger, AN1-type domain 3 -0.0248129
WDR70 WD repeat domain 70 -0.0248066
LARP4B La ribonucleoprotein domain family, member 4B -0.0245652
ARHGAP26 Rho GTPase activating protein 26 -0.0244662
HDLBP high density lipoprotein binding protein -0.024389
NOP58 NOP58 ribonucleoprotein -0.0241458
CTBP2 C-terminal binding protein 2 -0.0240668
SETD5 SET domain containing 5 -0.0240634
STAU1 staufen double-stranded RNA binding protein 1 -0.0236629
DYM dymeclin -0.0236549
FLNB filamin B, beta -0.0236471
RCC1 regulator of chromosome condensation 1 -0.0236276
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0234899
FBXL2 F-box and leucine-rich repeat protein 2 -0.0234739
EPAS1 endothelial PAS domain protein 1 -0.0233528
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0232882
RPS19 ribosomal protein S19 -0.0229985
NR4A1 nuclear receptor subfamily 4, group A, member 1 -0.0228737
CUX1 cut-like homeobox 1 -0.0227574
TOP1 topoisomerase (DNA) I -0.0227509
NSRP1 nuclear speckle splicing regulatory protein 1 -0.0227506
ARMH4 armadillo like helical domain containing 4 -0.0225587
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase -0.0225578
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0219886
INO80 INO80 complex subunit -0.0219587
ZNF207 zinc finger protein 207 -0.0218881
SEC31A SEC31 homolog A (S. cerevisiae) -0.0216992
EHBP1 EH domain binding protein 1 -0.0216216
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0216166
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0213073
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0212107
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0211718
MEF2D myocyte enhancer factor 2D -0.0208328
CTIF CBP80/20-dependent translation initiation factor -0.0207955
TBCA tubulin folding cofactor A -0.0205778
EXOC6B exocyst complex component 6B -0.0205695
SPDYA speedy/RINGO cell cycle regulator family member A -0.0203862
GPATCH2L G patch domain containing 2-like -0.0203772
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0203109
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0203027
ZNF609 zinc finger protein 609 -0.0202961
EXT1 exostosin glycosyltransferase 1 -0.0202952
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0202939