Simotinib_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Simotinib perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Simotinib_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.136618
PABPC1 poly(A) binding protein, cytoplasmic 1 0.133737
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.120339
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0952569
TFPI2 tissue factor pathway inhibitor 2 0.0943872
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0883331
RAD51B RAD51 paralog B 0.0792159
TPI1 triosephosphate isomerase 1 0.0780968
KTN1 kinectin 1 (kinesin receptor) 0.0739565
TRIO trio Rho guanine nucleotide exchange factor 0.073931
SMC4 structural maintenance of chromosomes 4 0.0689328
PHIP pleckstrin homology domain interacting protein 0.0538368
EIF1 eukaryotic translation initiation factor 1 0.0496704
BBX bobby sox homolog (Drosophila) 0.0486398
RTN4 reticulon 4 0.0480943
RPL35A ribosomal protein L35a 0.046975
RPS8 ribosomal protein S8 0.0466505
RPLP0 ribosomal protein, large, P0 0.0464942
TOP2A topoisomerase (DNA) II alpha 170kDa 0.045909
MT2A metallothionein 2A 0.0440101
LDHB lactate dehydrogenase B 0.0439697
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0435114
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0419854
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0395114
PGK1 phosphoglycerate kinase 1 0.0384874
ERRFI1 ERBB receptor feedback inhibitor 1 0.0384857
CBX3 chromobox homolog 3 0.0377551
MIS18BP1 MIS18 binding protein 1 0.037464
RPS21 ribosomal protein S21 0.0373985
TMSB10 thymosin beta 10 0.035222
MORF4L2 mortality factor 4 like 2 0.0348863
RPS6 ribosomal protein S6 0.0341758
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.0337842
ZCCHC7 zinc finger, CCHC domain containing 7 0.0337634
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0326961
CENPF centromere protein F, 350/400kDa 0.0325616
RPL12 ribosomal protein L12 0.0316076
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0314279
RPS19 ribosomal protein S19 0.0308639
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0301539
ESYT2 extended synaptotagmin-like protein 2 0.0300232
HMGA1 high mobility group AT-hook 1 0.0299613
VIM vimentin 0.0296102
MARCHF4 membrane associated ring-CH-type finger 4 0.0293568
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.0291757
RPL11 ribosomal protein L11 0.0291725
CCDC88A coiled-coil domain containing 88A 0.0289781
DIAPH3 diaphanous-related formin 3 0.0287682
RPL32 ribosomal protein L32 0.0279326
RPS4X ribosomal protein S4, X-linked 0.0278641
SET SET nuclear proto-oncogene 0.0277322
NAP1L1 nucleosome assembly protein 1-like 1 0.0276327
KMT2E lysine (K)-specific methyltransferase 2E 0.02743
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0268549
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0268306
GLO1 glyoxalase I 0.0267905
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.0267818
RPL5 ribosomal protein L5 0.0267029
RPLP1 ribosomal protein, large, P1 0.026582
SLC38A2 solute carrier family 38, member 2 0.0264547
RPS29 ribosomal protein S29 0.0262453
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0259247
RPL8 ribosomal protein L8 0.0253971
KRT18 keratin 18, type I 0.0253346
RPS27 ribosomal protein S27 0.0253073
ANLN anillin, actin binding protein 0.0251572
CEP192 centrosomal protein 192kDa 0.0250092
ZNF292 zinc finger protein 292 0.0249655
PFDN2 prefoldin subunit 2 0.0249453
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0247815
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0245901
RPS15 ribosomal protein S15 0.0244906
ADAM9 ADAM metallopeptidase domain 9 0.0243415
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0243287
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0243107
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0240638
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1 0.0237781
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0236621
PLCB4 phospholipase C, beta 4 0.0234065
PCM1 pericentriolar material 1 0.0234056
RPL19 ribosomal protein L19 0.0230155
MKI67 marker of proliferation Ki-67 0.0227699
RPL7 ribosomal protein L7 0.0226291
SGO2 shugoshin 2 0.0225
NABP1 nucleic acid binding protein 1 0.0224418
TMEM165 transmembrane protein 165 0.022406
RRM2 ribonucleotide reductase M2 0.0220665
CCT4 chaperonin containing TCP1, subunit 4 (delta) 0.022009
WNK1 WNK lysine deficient protein kinase 1 0.0218552
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 0.021568
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.021548
RUSC2 RUN and SH3 domain containing 2 0.0214314
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 0.0213785
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0213482
EXOC6B exocyst complex component 6B 0.0213343
ANKRD36 ankyrin repeat domain 36 0.021256
GOLGA4 golgin A4 0.0211073
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0210822
BABAM2 BRISC and BRCA1 A complex member 2 0.0209236
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0208943

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.472794
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.137531
OSMR oncostatin M receptor -0.0851704
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0723489
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0682935
IFI6 interferon, alpha-inducible protein 6 -0.0605084
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0593444
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0575164
MCL1 myeloid cell leukemia 1 -0.0546661
UBC ubiquitin C -0.0530967
AFF3 AF4/FMR2 family, member 3 -0.0525232
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0485211
TPM4 tropomyosin 4 -0.0481458
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0475532
HMGA2 high mobility group AT-hook 2 -0.0471656
RAB7A RAB7A, member RAS oncogene family -0.0454548
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0449934
HLA-B major histocompatibility complex, class I, B -0.0405529
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0382876
TPM3 tropomyosin 3 -0.0377808
PDE10A phosphodiesterase 10A -0.0376965
NF1 neurofibromin 1 -0.0368828
IER3 immediate early response 3 -0.0367591
RIMS2 regulating synaptic membrane exocytosis 2 -0.0350133
PRH1 proline-rich protein HaeIII subfamily 1 -0.0345088
WWTR1 WW domain containing transcription regulator 1 -0.0340449
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0336894
PYGL phosphorylase, glycogen, liver -0.033435
AHNAK AHNAK nucleoprotein -0.0322982
RYR3 ryanodine receptor 3 -0.0320298
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.031502
CUX1 cut-like homeobox 1 -0.0312387
USP34 ubiquitin specific peptidase 34 -0.0311842
THSD4 thrombospondin, type I, domain containing 4 -0.0303256
NCOA7 nuclear receptor coactivator 7 -0.0300084
WNT2B wingless-type MMTV integration site family, member 2B -0.0295772
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.029544
EML4 echinoderm microtubule associated protein like 4 -0.0290802
STAU1 staufen double-stranded RNA binding protein 1 -0.0290269
LOC102724023 ES1 protein homolog, mitochondrial -0.0287398
AEBP2 AE binding protein 2 -0.0285058
CDK12 cyclin-dependent kinase 12 -0.0280434
BPTF bromodomain PHD finger transcription factor -0.0278877
RNF213 ring finger protein 213 -0.0273046
CAVIN1 caveolae associated protein 1 -0.0272295
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0271336
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0261792
CLIP1 CAP-GLY domain containing linker protein 1 -0.0261763
VMP1 vacuole membrane protein 1 -0.0258721
PTK2 protein tyrosine kinase 2 -0.0256097
MCTP1 multiple C2 domains, transmembrane 1 -0.0255546
MAP4 microtubule-associated protein 4 -0.025483
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0253805
MACF1 microtubule-actin crosslinking factor 1 -0.0252042
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0251624
ICAM1 intercellular adhesion molecule 1 -0.0251217
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.025089
TPT1 tumor protein, translationally-controlled 1 -0.0249976
CTTN cortactin -0.0249544
EEF2 eukaryotic translation elongation factor 2 -0.0247744
ATG7 autophagy related 7 -0.0247725
IGF1R insulin-like growth factor 1 receptor -0.0245389
CSDE1 cold shock domain containing E1, RNA-binding -0.0245168
VCL vinculin -0.0244866
GPATCH8 G patch domain containing 8 -0.0242078
ITSN1 intersectin 1 (SH3 domain protein) -0.0241165
FNDC3B fibronectin type III domain containing 3B -0.0240309
EPAS1 endothelial PAS domain protein 1 -0.023654
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.023363
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0233392
ACTN1 actinin, alpha 1 -0.0232262
SVIL supervillin -0.0224111
DOCK1 dedicator of cytokinesis 1 -0.0221934
TRIP12 thyroid hormone receptor interactor 12 -0.0221576
ELL2 elongation factor, RNA polymerase II, 2 -0.0218085
ETV6 ets variant 6 -0.0216455
TAOK1 TAO kinase 1 -0.0207803
TAPBP TAP binding protein (tapasin) -0.020745
RPS27A ribosomal protein S27a -0.0207301
NTSR1 neurotensin receptor 1 (high affinity) -0.0205529
TM4SF1 transmembrane 4 L six family member 1 -0.0205485
PDLIM5 PDZ and LIM domain 5 -0.0202531
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0199747
VCP valosin containing protein -0.0196977
APP amyloid beta (A4) precursor protein -0.0195488
INTS6 integrator complex subunit 6 -0.0194975
PLEC plectin -0.0194369
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0194157
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0193219
SETX senataxin -0.0192537
EGFR epidermal growth factor receptor -0.0191105
DOCK5 dedicator of cytokinesis 5 -0.0189667
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0189044
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0186906
CALR calreticulin -0.0186596
KDM4B lysine (K)-specific demethylase 4B -0.0186579
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0186139
STC1 stanniocalcin 1 -0.0184007
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0183736
CDK17 cyclin-dependent kinase 17 -0.0180801