Simotinib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Simotinib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Simotinib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.163917
PABPC1 poly(A) binding protein, cytoplasmic 1 0.146493
VIM vimentin 0.122803
CDH10 cadherin 10, type 2 (T2-cadherin) 0.121868
TMSB10 thymosin beta 10 0.0874628
HDAC9 histone deacetylase 9 0.0819727
PHIP pleckstrin homology domain interacting protein 0.0752324
ZNF292 zinc finger protein 292 0.0746846
ZEB2 zinc finger E-box binding homeobox 2 0.0713899
TSC22D2 TSC22 domain family, member 2 0.069508
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0674275
PFN1 profilin 1 0.0665496
GNAS GNAS complex locus 0.0641312
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0635802
RPS6 ribosomal protein S6 0.0633421
EIF1 eukaryotic translation initiation factor 1 0.0622018
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0616035
COL11A1 collagen, type XI, alpha 1 0.0607867
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0594126
PEG10 paternally expressed 10 0.0592356
COL5A2 collagen, type V, alpha 2 0.0591871
TENM3 teneurin transmembrane protein 3 0.0581912
PGK1 phosphoglycerate kinase 1 0.0579848
RPS16 ribosomal protein S16 0.057158
PGAP1 post-GPI attachment to proteins 1 0.0560489
ATP5F1B ATP synthase F1 subunit beta 0.0553128
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0545026
RPS8 ribosomal protein S8 0.053157
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.0527684
RPL35A ribosomal protein L35a 0.0526507
ITGAV integrin, alpha V 0.0521546
FNDC3B fibronectin type III domain containing 3B 0.0518125
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0515352
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0480431
RPL23 ribosomal protein L23 0.0472875
PDE4D phosphodiesterase 4D, cAMP-specific 0.047093
LDHA lactate dehydrogenase A 0.0467807
KMT2E lysine (K)-specific methyltransferase 2E 0.0459478
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0454887
PCDH9 protocadherin 9 0.0452203
CDC73 cell division cycle 73 0.0450954
RPL7 ribosomal protein L7 0.0446836
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0435583
PRTG protogenin 0.0433593
ZC3H15 zinc finger CCCH-type containing 15 0.043161
PDIA3 protein disulfide isomerase family A, member 3 0.0412428
SLC38A2 solute carrier family 38, member 2 0.0411062
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0409405
MTF2 metal response element binding transcription factor 2 0.0394548
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0390231
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0380693
SCAF11 SR-related CTD-associated factor 11 0.0372202
ENAH enabled homolog (Drosophila) 0.0364281
SETD5 SET domain containing 5 0.036426
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.036003
PUM1 pumilio RNA-binding family member 1 0.0359404
ADGRL3 adhesion G protein-coupled receptor L3 0.0359137
MPG N-methylpurine-DNA glycosylase 0.0358388
RASAL2 RAS protein activator like 2 0.0355081
TRA2A transformer 2 alpha homolog (Drosophila) 0.0353416
ATP5F1E ATP synthase F1 subunit epsilon 0.035253
RPL31 ribosomal protein L31 0.0349657
KMT2C lysine (K)-specific methyltransferase 2C 0.0348482
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0347911
RPL5 ribosomal protein L5 0.034605
ADAM9 ADAM metallopeptidase domain 9 0.0341623
RPS13 ribosomal protein S13 0.034053
RPL37 ribosomal protein L37 0.0339284
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0336348
SRP54 signal recognition particle 54kDa 0.0331507
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0328648
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0325844
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0325267
SOX2 SRY (sex determining region Y)-box 2 0.0325249
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0319267
FST follistatin 0.0316814
APLP2 amyloid beta (A4) precursor-like protein 2 0.0310477
RPLP0 ribosomal protein, large, P0 0.0309961
PA2G4 proliferation-associated 2G4, 38kDa 0.0307472
SORBS2 sorbin and SH3 domain containing 2 0.030554
MED13L mediator complex subunit 13-like 0.030487
DDIT4 DNA-damage-inducible transcript 4 0.0301399
USP3 ubiquitin specific peptidase 3 0.0301318
TCEA1 transcription elongation factor A (SII), 1 0.0300295
MDK midkine (neurite growth-promoting factor 2) 0.0297806
DSTN destrin (actin depolymerizing factor) 0.029759
RPS21 ribosomal protein S21 0.0296979
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0295723
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 0.0295684
MEMO1 mediator of cell motility 1 0.0295602
WSB1 WD repeat and SOCS box containing 1 0.0295296
CLTC clathrin, heavy chain (Hc) 0.0293709
CADM2 cell adhesion molecule 2 0.0292292
LDHB lactate dehydrogenase B 0.0290984
OLA1 Obg-like ATPase 1 0.0289368
WDR43 WD repeat domain 43 0.0288943
VMP1 vacuole membrane protein 1 0.0287064
PLPP1 phospholipid phosphatase 1 0.0286186
FGFR1OP2 FGFR1 oncogene partner 2 0.0283356
RDX radixin 0.0282899

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0555476
HMGB1 high mobility group box 1 -0.0432176
COL3A1 collagen, type III, alpha 1 -0.0430976
TPT1 tumor protein, translationally-controlled 1 -0.0340791
PTMA prothymosin, alpha -0.0301131
RAB31 RAB31, member RAS oncogene family -0.0281298
NUSAP1 nucleolar and spindle associated protein 1 -0.0243434
RSL1D1 ribosomal L1 domain containing 1 -0.0233842
FSCN1 fascin actin-bundling protein 1 -0.0217917
DEPDC1 DEP domain containing 1 -0.0207567
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0204808
HIP1 huntingtin interacting protein 1 -0.0200286
PCLO piccolo presynaptic cytomatrix protein -0.0197414
DIAPH3 diaphanous-related formin 3 -0.0197029
EGFR epidermal growth factor receptor -0.0195243
CENPE centromere protein E, 312kDa -0.0189797
MKI67 marker of proliferation Ki-67 -0.0183578
LOC102724023 ES1 protein homolog, mitochondrial -0.0183196
CAVIN1 caveolae associated protein 1 -0.0180997
SRP72 signal recognition particle 72kDa -0.0173126
AHNAK AHNAK nucleoprotein -0.0172794
BAZ2B bromodomain adjacent to zinc finger domain, 2B -0.0170197
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0170127
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.016863
EXOC6B exocyst complex component 6B -0.0167404
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0166286
NPAS3 neuronal PAS domain protein 3 -0.0165701
ACACA acetyl-CoA carboxylase alpha -0.0165529
GAS2L3 growth arrest-specific 2 like 3 -0.0161662
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0161565
FBXO9 F-box protein 9 -0.0159613
PARD3B par-3 family cell polarity regulator beta -0.0159121
DEK DEK proto-oncogene -0.0158291
MACF1 microtubule-actin crosslinking factor 1 -0.015792
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0157409
R3HDM1 R3H domain containing 1 -0.015564
GPATCH8 G patch domain containing 8 -0.0154941
ZNF609 zinc finger protein 609 -0.0154742
IARS1 isoleucyl-tRNA synthetase 1 -0.0154405
BIRC5 baculoviral IAP repeat containing 5 -0.0153971
NECTIN2 nectin cell adhesion molecule 2 -0.0153531
STK4 serine/threonine kinase 4 -0.0153493
ZNF106 zinc finger protein 106 -0.0153378
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 -0.0152467
KDM4B lysine (K)-specific demethylase 4B -0.0152038
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma -0.0151769
CCDC18 coiled-coil domain containing 18 -0.0151754
ACBD6 acyl-CoA binding domain containing 6 -0.0151751
RNF149 ring finger protein 149 -0.0150911
CENPF centromere protein F, 350/400kDa -0.015019
GOLGA3 golgin A3 -0.0148602
AAK1 AP2 associated kinase 1 -0.014758
BRCA1 breast cancer 1, early onset -0.0147473
UBTF upstream binding transcription factor, RNA polymerase I -0.0147361
SMAD3 SMAD family member 3 -0.0146358
COL6A3 collagen, type VI, alpha 3 -0.0145891
IFIH1 interferon induced with helicase C domain 1 -0.0145735
ZC3H12B zinc finger CCCH-type containing 12B -0.0145371
FBXO17 F-box protein 17 -0.0143771
NF1 neurofibromin 1 -0.0141712
KIAA1328 KIAA1328 -0.0140503
KHSRP KH-type splicing regulatory protein -0.0140476
H1-0 H1.0 linker histone -0.0140469
TRIM56 tripartite motif containing 56 -0.0140216
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0139923
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0139413
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 -0.0139258
PDIA4 protein disulfide isomerase family A, member 4 -0.0138826
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0138496
FOXP1 forkhead box P1 -0.0137232
RBBP6 retinoblastoma binding protein 6 -0.0136723
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -0.0136447
NFIA nuclear factor I/A -0.0136368
TCF12 transcription factor 12 -0.0135509
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 -0.0133707
SLC30A8 solute carrier family 30 (zinc transporter), member 8 -0.0133197
AGO3 argonaute RISC catalytic component 3 -0.013273
PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 -0.0132578
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0132239
BRIX1 BRX1, biogenesis of ribosomes -0.0131962
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 -0.013081
CS citrate synthase -0.013019
CLIC4 chloride intracellular channel 4 -0.0130155
STX8 syntaxin 8 -0.0129059
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0128254
RNF169 ring finger protein 169 -0.0128173
TET1 tet methylcytosine dioxygenase 1 -0.0127661
RPL38 ribosomal protein L38 -0.0127191
RPL14 ribosomal protein L14 -0.0126876
TMEM263 transmembrane protein 263 -0.0126849
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0126314
PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3 -0.0126308
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0126204
PSIP1 PC4 and SFRS1 interacting protein 1 -0.0125923
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0125747
BABAM2 BRISC and BRCA1 A complex member 2 -0.0125736
TYW1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) -0.0125588
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0125499
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) -0.0125373
NOL7 nucleolar protein 7, 27kDa -0.0125342