Simotinib_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Simotinib perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Simotinib_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.178458
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.136409
FTL ferritin, light polypeptide 0.0821574
B2M beta-2-microglobulin 0.0813155
ADM adrenomedullin 0.0672994
TMSB10 thymosin beta 10 0.0661833
NDRG1 N-myc downstream regulated 1 0.0566539
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0538985
RPL35A ribosomal protein L35a 0.0517859
NALF1 NALCN channel auxiliary factor 1 0.050167
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0489951
RPS23 ribosomal protein S23 0.0487278
MACF1 microtubule-actin crosslinking factor 1 0.0440849
RPS21 ribosomal protein S21 0.043192
HMGA2 high mobility group AT-hook 2 0.0427542
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0426227
CAST calpastatin 0.0421466
SEC24A SEC24 family member A 0.0405242
RPLP1 ribosomal protein, large, P1 0.0403073
FMNL2 formin-like 2 0.0392259
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.038961
UBA6 ubiquitin-like modifier activating enzyme 6 0.0377601
RBM39 RNA binding motif protein 39 0.0374747
EIF1 eukaryotic translation initiation factor 1 0.0371589
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0368222
MYO1E myosin IE 0.0367755
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.036457
NEBL nebulette 0.0351015
WASF2 WAS protein family, member 2 0.0350124
PDE4D phosphodiesterase 4D, cAMP-specific 0.0348477
LMNA lamin A/C 0.0347099
ABLIM3 actin binding LIM protein family, member 3 0.0343255
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0342344
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0335094
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0333868
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0328136
MRPL1 mitochondrial ribosomal protein L1 0.0325544
CORO1C coronin, actin binding protein, 1C 0.0325134
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) 0.0324598
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0324549
RPL34 ribosomal protein L34 0.0321502
RPS14 ribosomal protein S14 0.0321331
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0319189
MT1X metallothionein 1X 0.0314087
PRICKLE2 prickle homolog 2 (Drosophila) 0.0313814
CD44 CD44 molecule (Indian blood group) 0.0313785
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0312658
FGGY FGGY carbohydrate kinase domain containing 0.0309877
TNRC6B trinucleotide repeat containing 6B 0.0306598
MAML2 mastermind-like 2 (Drosophila) 0.0303885
GPC6 glypican 6 0.0302482
LSAMP limbic system-associated membrane protein 0.030175
FCHO2 FCH domain only 2 0.0299792
ANLN anillin, actin binding protein 0.0293519
PTBP2 polypyrimidine tract binding protein 2 0.0293461
GNAS GNAS complex locus 0.0291408
PEG10 paternally expressed 10 0.0291325
MBNL1 muscleblind-like splicing regulator 1 0.029103
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0291019
BMERB1 bMERB domain containing 1 0.0290524
BTG1 B-cell translocation gene 1, anti-proliferative 0.0290307
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0288529
SDK1 sidekick cell adhesion molecule 1 0.0285614
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0285461
TRA2A transformer 2 alpha homolog (Drosophila) 0.0282672
RPL19 ribosomal protein L19 0.0281947
PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha 0.027841
SVIL supervillin 0.0278087
STC1 stanniocalcin 1 0.0277196
IFIH1 interferon induced with helicase C domain 1 0.0276179
RPL11 ribosomal protein L11 0.0275727
SOX5 SRY (sex determining region Y)-box 5 0.0275521
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0273347
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 0.0270968
PDE10A phosphodiesterase 10A 0.0270446
NACA nascent polypeptide-associated complex alpha subunit 0.0268326
RPS12 ribosomal protein S12 0.0267186
LGALS1 lectin, galactoside-binding, soluble, 1 0.0267099
EGLN3 egl-9 family hypoxia-inducible factor 3 0.026393
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0262256
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0259236
BCLAF1 BCL2-associated transcription factor 1 0.0258048
UBE2B ubiquitin-conjugating enzyme E2B 0.0257969
RPL9 ribosomal protein L9 0.0257599
CSNK1A1 casein kinase 1, alpha 1 0.0256865
HMGA1 high mobility group AT-hook 1 0.0255537
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0250186
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0250115
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 0.0248836
RPS4X ribosomal protein S4, X-linked 0.0247567
RPN2 ribophorin II 0.0247454
WSB1 WD repeat and SOCS box containing 1 0.0247289
NPTN neuroplastin 0.0245947
TM9SF4 transmembrane 9 superfamily protein member 4 0.0245378
RPL36 ribosomal protein L36 0.0244511
GOLGA4 golgin A4 0.0243062
MTPN myotrophin 0.0242393
ATP5F1B ATP synthase F1 subunit beta 0.0241404
RB1CC1 RB1-inducible coiled-coil 1 0.0240159
EIF4A1 eukaryotic translation initiation factor 4A1 0.0239263

decreased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 -0.467522
IGFBP3 insulin-like growth factor binding protein 3 -0.198959
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.15845
COL1A1 collagen, type I, alpha 1 -0.143164
LOX lysyl oxidase -0.142888
TGFBI transforming growth factor, beta-induced, 68kDa -0.126983
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.119046
COL1A2 collagen, type I, alpha 2 -0.117308
FN1 fibronectin 1 -0.109524
AHNAK AHNAK nucleoprotein -0.0879069
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0853793
COL6A1 collagen, type VI, alpha 1 -0.0818231
COL6A2 collagen, type VI, alpha 2 -0.0814276
GLIS3 GLIS family zinc finger 3 -0.0762307
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0752123
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0731187
CANX calnexin -0.0649333
GRB10 growth factor receptor-bound protein 10 -0.0642347
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0631335
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0628688
NRXN3 neurexin 3 -0.0618818
COL3A1 collagen, type III, alpha 1 -0.0604003
LOXL2 lysyl oxidase-like 2 -0.059743
TRIO trio Rho guanine nucleotide exchange factor -0.0571489
TPM4 tropomyosin 4 -0.0570551
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0547248
PDIA3 protein disulfide isomerase family A, member 3 -0.051007
ENO1 enolase 1, (alpha) -0.0465469
COL5A2 collagen, type V, alpha 2 -0.0458763
ZFAND3 zinc finger, AN1-type domain 3 -0.0457328
CALU calumenin -0.0451443
FNDC3A fibronectin type III domain containing 3A -0.0431452
PDIA4 protein disulfide isomerase family A, member 4 -0.0428278
POTEF POTE ankyrin domain family, member F -0.0427663
PLCB4 phospholipase C, beta 4 -0.0410714
TTC3 tetratricopeptide repeat domain 3 -0.0405703
ERRFI1 ERBB receptor feedback inhibitor 1 -0.039964
SMYD3 SET and MYND domain containing 3 -0.0399567
PSD3 pleckstrin and Sec7 domain containing 3 -0.0398996
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0397003
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0390909
HDLBP high density lipoprotein binding protein -0.0390664
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 -0.0390505
HIP1 huntingtin interacting protein 1 -0.0389758
SCARB2 scavenger receptor class B, member 2 -0.038517
EXT1 exostosin glycosyltransferase 1 -0.0366872
RAB1A RAB1A, member RAS oncogene family -0.0366448
HLA-C major histocompatibility complex, class I, C -0.0365261
F3 coagulation factor III (thromboplastin, tissue factor) -0.0359788
COL5A1 collagen, type V, alpha 1 -0.0359574
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0358522
CENPF centromere protein F, 350/400kDa -0.0357983
TMEM165 transmembrane protein 165 -0.0350148
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0345889
UBC ubiquitin C -0.0340281
SDC4 syndecan 4 -0.0340077
SMAD3 SMAD family member 3 -0.0339402
BBS9 Bardet-Biedl syndrome 9 -0.0331473
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0328197
ASPH aspartate beta-hydroxylase -0.031966
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0317437
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0316251
RAB10 RAB10, member RAS oncogene family -0.0313739
C1D C1D nuclear receptor corepressor -0.0313091
RAI14 retinoic acid induced 14 -0.0310256
JAZF1 JAZF zinc finger 1 -0.0309554
ATP13A3 ATPase type 13A3 -0.030918
CADM1 cell adhesion molecule 1 -0.0296997
AKAP12 A kinase (PRKA) anchor protein 12 -0.0295474
SAMD4A sterile alpha motif domain containing 4A -0.0293157
BSG basigin (Ok blood group) -0.0289725
PXDN peroxidasin -0.0288736
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0286926
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0285834
PDLIM5 PDZ and LIM domain 5 -0.028528
CDH13 cadherin 13 -0.0282481
DST dystonin -0.0279962
NRP1 neuropilin 1 -0.0278906
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0277454
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0276073
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0275152
FAM20C family with sequence similarity 20, member C -0.0273787
SLC38A2 solute carrier family 38, member 2 -0.0272498
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0269189
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.026766
CDK6 cyclin-dependent kinase 6 -0.0265873
HIPK2 homeodomain interacting protein kinase 2 -0.0263216
LAMA4 laminin, alpha 4 -0.0262675
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0262106
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0260494
GARS1 glycyl-tRNA synthetase 1 -0.0259664
CTSB cathepsin B -0.0258784
TPM1 tropomyosin 1 (alpha) -0.0258279
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 -0.0257186
KIRREL1 kirre like nephrin family adhesion molecule 1 -0.0257175
SEC24D SEC24 family member D -0.025651
IL6 interleukin 6 -0.0254361
SOD2 superoxide dismutase 2, mitochondrial -0.0252396
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0250896
ZNF148 zinc finger protein 148 -0.0250633