Simotinib_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Simotinib perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Simotinib_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.283065
NAMPT nicotinamide phosphoribosyltransferase 0.220381
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.208098
FNDC3B fibronectin type III domain containing 3B 0.130321
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.129591
ITGA1 integrin, alpha 1 0.113216
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.107994
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.101756
ASPH aspartate beta-hydroxylase 0.0918098
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0853442
TRIO trio Rho guanine nucleotide exchange factor 0.0804351
CENPF centromere protein F, 350/400kDa 0.0792326
AHR aryl hydrocarbon receptor 0.0774891
NRG1 neuregulin 1 0.0694005
FN1 fibronectin 1 0.0675883
TMEM156 transmembrane protein 156 0.0645511
CANX calnexin 0.0633542
PRELID2 PRELI domain containing 2 0.0617868
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0611915
DST dystonin 0.0605646
NRIP1 nuclear receptor interacting protein 1 0.0597265
GLIS3 GLIS family zinc finger 3 0.0539982
PTK2 protein tyrosine kinase 2 0.0517287
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0505511
HIPK2 homeodomain interacting protein kinase 2 0.0505101
HMGA2 high mobility group AT-hook 2 0.0502937
TAS2R14 taste receptor, type 2, member 14 0.0499529
CD109 CD109 molecule 0.049588
SMYD3 SET and MYND domain containing 3 0.0471829
OSMR oncostatin M receptor 0.0471071
FAM13A family with sequence similarity 13, member A 0.0470601
EFNA5 ephrin-A5 0.0469243
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0444737
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0438122
MCTP2 multiple C2 domains, transmembrane 2 0.0437124
TOP2A topoisomerase (DNA) II alpha 170kDa 0.043453
APLP2 amyloid beta (A4) precursor-like protein 2 0.04234
PLIN2 perilipin 2 0.041837
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0416287
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.041322
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0408747
MKI67 marker of proliferation Ki-67 0.040776
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0399889
ATXN1 ataxin 1 0.0396055
TPR translocated promoter region, nuclear basket protein 0.039486
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0388023
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0383865
GPC6 glypican 6 0.0356132
PGK1 phosphoglycerate kinase 1 0.0354877
PKM pyruvate kinase, muscle 0.0351522
NIPBL Nipped-B homolog (Drosophila) 0.0350968
ZNF292 zinc finger protein 292 0.033982
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0336702
IFI16 interferon, gamma-inducible protein 16 0.0331983
RUNX1 runt-related transcription factor 1 0.0325508
RBM39 RNA binding motif protein 39 0.0323095
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.031844
NDRG1 N-myc downstream regulated 1 0.0318429
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.031575
RUNX2 runt-related transcription factor 2 0.0313867
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0312194
CXCL8 chemokine (C-X-C motif) ligand 8 0.0311094
LOXL2 lysyl oxidase-like 2 0.0309593
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0306375
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0306213
RAD51B RAD51 paralog B 0.0305522
TPI1 triosephosphate isomerase 1 0.0297094
NPC1 Niemann-Pick disease, type C1 0.0290334
VEGFC vascular endothelial growth factor C 0.0290198
NAV2 neuron navigator 2 0.0290126
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0288833
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.028791
LDHA lactate dehydrogenase A 0.0287156
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0285304
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0280566
ITGB5 integrin, beta 5 0.0276463
RICTOR RPTOR independent companion of MTOR, complex 2 0.0276368
ZNF638 zinc finger protein 638 0.0275281
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0275138
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0274111
ERRFI1 ERBB receptor feedback inhibitor 1 0.0274002
SGO2 shugoshin 2 0.0273622
MYH9 myosin, heavy chain 9, non-muscle 0.0273404
AFDN afadin, adherens junction formation factor 0.027316
TXNRD1 thioredoxin reductase 1 0.0271428
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0270559
CDCP1 CUB domain containing protein 1 0.0270449
HELZ helicase with zinc finger 0.0270056
BIRC6 baculoviral IAP repeat containing 6 0.0268848
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0265836
MBD5 methyl-CpG binding domain protein 5 0.0265639
ZC3H11A zinc finger CCCH-type containing 11A 0.0265096
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0262485
BZW1 basic leucine zipper and W2 domains 1 0.0261982
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.026081
EREG epiregulin 0.0260335
LIFR leukemia inhibitory factor receptor alpha 0.0258154
CLTC clathrin, heavy chain (Hc) 0.0254555
ENO1 enolase 1, (alpha) 0.0252898
PELO pelota homolog (Drosophila) 0.0251057

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.0483891
PTMA prothymosin, alpha -0.0414373
FTH1 ferritin, heavy polypeptide 1 -0.0333795
NTN4 netrin 4 -0.0306247
FTL ferritin, light polypeptide -0.0298641
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0280922
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0275268
PALLD palladin, cytoskeletal associated protein -0.0247967
VMP1 vacuole membrane protein 1 -0.0231304
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0212636
CALR calreticulin -0.0204074
NOP58 NOP58 ribonucleoprotein -0.0199061
RPL35A ribosomal protein L35a -0.0195307
EGR1 early growth response 1 -0.0190041
LOC102724023 ES1 protein homolog, mitochondrial -0.0189745
AHRR aryl-hydrocarbon receptor repressor -0.0186989
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0186215
ACTG1 actin gamma 1 -0.0183337
RAB7A RAB7A, member RAS oncogene family -0.0177402
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0177047
SOX4 SRY (sex determining region Y)-box 4 -0.0174906
VEGFA vascular endothelial growth factor A -0.0173185
WDR43 WD repeat domain 43 -0.0170582
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0168434
RPLP2 ribosomal protein, large, P2 -0.0167612
RPS23 ribosomal protein S23 -0.0166919
RPS29 ribosomal protein S29 -0.0166094
RPS19 ribosomal protein S19 -0.0164553
RAB10 RAB10, member RAS oncogene family -0.0163263
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0162854
RPL12 ribosomal protein L12 -0.0157721
POTEF POTE ankyrin domain family, member F -0.0156414
CLIP2 CAP-GLY domain containing linker protein 2 -0.0155409
BRD2 bromodomain containing 2 -0.0155282
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0152832
ZC3H15 zinc finger CCCH-type containing 15 -0.0148431
RPL8 ribosomal protein L8 -0.0145404
TGFB1 transforming growth factor, beta 1 -0.0144463
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0144038
RPL21 ribosomal protein L21 -0.0138782
EXT1 exostosin glycosyltransferase 1 -0.0136886
KSR1 kinase suppressor of ras 1 -0.0134623
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0131322
BSG basigin (Ok blood group) -0.0129262
NXN nucleoredoxin -0.0129183
SMIM44 small integral membrane protein 44 -0.0128869
TP53BP1 tumor protein p53 binding protein 1 -0.0126659
INTS6 integrator complex subunit 6 -0.0124986
RPL36A ribosomal protein L36a -0.0123508
TFPI2 tissue factor pathway inhibitor 2 -0.012219
CCDC138 coiled-coil domain containing 138 -0.0120417
FAM177A1 family with sequence similarity 177, member A1 -0.0117175
RPS14 ribosomal protein S14 -0.0117051
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0115092
RPS25 ribosomal protein S25 -0.0114098
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0113921
CDK13 cyclin-dependent kinase 13 -0.0112097
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0111957
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.011177
RPL19 ribosomal protein L19 -0.0110857
GLS2 glutaminase 2 (liver, mitochondrial) -0.0110236
DENND4A DENN/MADD domain containing 4A -0.0109154
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0108459
FERMT2 fermitin family member 2 -0.0108107
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.010781
ENO2 enolase 2 (gamma, neuronal) -0.0107491
TMED3 transmembrane emp24 protein transport domain containing 3 -0.0106786
RPL37 ribosomal protein L37 -0.0106524
PIM3 Pim-3 proto-oncogene, serine/threonine kinase -0.0105239
UBAP1 ubiquitin associated protein 1 -0.0105108
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0103607
SFTPA2 surfactant protein A2 -0.010275
LY6E lymphocyte antigen 6 complex, locus E -0.0102718
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0102684
DSTN destrin (actin depolymerizing factor) -0.0102656
CXCL3 chemokine (C-X-C motif) ligand 3 -0.0101849
PDIA5 protein disulfide isomerase family A, member 5 -0.0101646
USP3 ubiquitin specific peptidase 3 -0.0101154
STAU1 staufen double-stranded RNA binding protein 1 -0.0101059
SMOC1 SPARC related modular calcium binding 1 -0.0100605
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) -0.0100181
EPS8 epidermal growth factor receptor pathway substrate 8 -0.00999743
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 -0.00994898
TJP1 tight junction protein 1 -0.00992193
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.00977793
MEF2D myocyte enhancer factor 2D -0.00972441
CRY1 cryptochrome circadian clock 1 -0.00968452
UBE2K ubiquitin-conjugating enzyme E2K -0.0096715
SIK2 salt-inducible kinase 2 -0.00964445
PPP1R15B protein phosphatase 1, regulatory subunit 15B -0.00957095
DHFR dihydrofolate reductase -0.00953803
VCL vinculin -0.00947602
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.00943143
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.00938454
PRPF39 pre-mRNA processing factor 39 -0.00933974
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0093344
WASF2 WAS protein family, member 2 -0.00930771
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0092785
TIMP1 TIMP metallopeptidase inhibitor 1 -0.00921997
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) -0.0091673