Sinomenine_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Sinomenine perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Sinomenine_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CDH13 cadherin 13 0.185338
AHNAK AHNAK nucleoprotein 0.163124
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.15492
TRIO trio Rho guanine nucleotide exchange factor 0.111497
SLC39A11 solute carrier family 39, member 11 0.0880918
COL5A1 collagen, type V, alpha 1 0.0863655
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0820129
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0805855
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0795462
EFNA5 ephrin-A5 0.0768809
EGFR epidermal growth factor receptor 0.074929
MAP1B microtubule-associated protein 1B 0.0730134
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0708157
ASPH aspartate beta-hydroxylase 0.0700145
NAV1 neuron navigator 1 0.0699529
FN1 fibronectin 1 0.069139
ANKRD11 ankyrin repeat domain 11 0.0653802
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0651386
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0639275
MACF1 microtubule-actin crosslinking factor 1 0.0629573
HDAC9 histone deacetylase 9 0.0629183
S100A10 S100 calcium binding protein A10 0.0545817
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0539982
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.052402
PBX3 pre-B-cell leukemia homeobox 3 0.0508105
SP100 SP100 nuclear antigen 0.0503587
FSTL1 follistatin-like 1 0.0502394
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 0.0482341
EXT1 exostosin glycosyltransferase 1 0.0480402
DGKG diacylglycerol kinase, gamma 90kDa 0.0476559
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0467823
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0460667
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 0.04604
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0437318
RIGI RNA sensor RIG-I 0.0431489
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.042493
PLXNA2 plexin A2 0.0416469
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0414776
CANX calnexin 0.0410783
DOCK5 dedicator of cytokinesis 5 0.0407531
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0384716
DCLK2 doublecortin-like kinase 2 0.0379677
INTS6 integrator complex subunit 6 0.0378391
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0376285
MBNL1 muscleblind-like splicing regulator 1 0.037291
CDK6 cyclin-dependent kinase 6 0.0365682
AHNAK2 AHNAK nucleoprotein 2 0.0364469
ZSWIM6 zinc finger, SWIM-type containing 6 0.0357643
ALCAM activated leukocyte cell adhesion molecule 0.0355414
CALR calreticulin 0.035524
ENO1 enolase 1, (alpha) 0.0352235
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0350873
SAMD9 sterile alpha motif domain containing 9 0.0344357
CYTH3 cytohesin 3 0.0335271
RHOBTB3 Rho-related BTB domain containing 3 0.0334816
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0326546
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0325058
SORBS2 sorbin and SH3 domain containing 2 0.0322544
DSPP dentin sialophosphoprotein 0.0322388
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0315737
PRKCE protein kinase C, epsilon 0.0306347
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0302661
VCL vinculin 0.0299442
PDLIM5 PDZ and LIM domain 5 0.0298785
KIAA1549L KIAA1549-like 0.0298609
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0298193
TPM3 tropomyosin 3 0.0293985
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0293779
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0289552
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0283199
FMN2 formin 2 0.0281915
FLT1 fms-related tyrosine kinase 1 0.0281166
ANXA1 annexin A1 0.0279929
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0277272
LIMCH1 LIM and calponin homology domains 1 0.026476
TLE4 transducin-like enhancer of split 4 0.0262802
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0262634
ANXA2 annexin A2 0.0261411
ABI3BP ABI family, member 3 (NESH) binding protein 0.0261242
PCDH7 protocadherin 7 0.0258143
ANKRD30B ankyrin repeat domain 30B 0.0256335
DIAPH3 diaphanous-related formin 3 0.0255377
SMAD3 SMAD family member 3 0.0254323
CUX1 cut-like homeobox 1 0.025283
LMNA lamin A/C 0.0251454
RND3 Rho family GTPase 3 0.0250511
NAV3 neuron navigator 3 0.0249349
PRELID2 PRELI domain containing 2 0.0249031
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0249009
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.024796
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 0.0245229
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.0244749
RRM2 ribonucleotide reductase M2 0.0244376
ADARB1 adenosine deaminase, RNA-specific, B1 0.0243142
FBXL7 F-box and leucine-rich repeat protein 7 0.0238064
SPDL1 spindle apparatus coiled-coil protein 1 0.0236586
SMYD3 SET and MYND domain containing 3 0.0234221
ADAM32 ADAM metallopeptidase domain 32 0.0232947
LNPEP leucyl/cystinyl aminopeptidase 0.0232473
JMJD1C jumonji domain containing 1C 0.0232389

decreased expression

Symbol Name Standardized Value
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.306507
FBN1 fibrillin 1 -0.175906
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.13279
NDRG1 N-myc downstream regulated 1 -0.123043
COL1A2 collagen, type I, alpha 2 -0.116426
IGFBP3 insulin-like growth factor binding protein 3 -0.10765
LOXL2 lysyl oxidase-like 2 -0.0938603
SOD2 superoxide dismutase 2, mitochondrial -0.0863226
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0785417
LOX lysyl oxidase -0.0765239
COL8A1 collagen, type VIII, alpha 1 -0.0731932
STC1 stanniocalcin 1 -0.0648846
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0640893
DLG1 discs, large homolog 1 (Drosophila) -0.0628334
MT2A metallothionein 2A -0.0626753
ZBTB20 zinc finger and BTB domain containing 20 -0.0578203
DPYSL3 dihydropyrimidinase-like 3 -0.0555007
PSD3 pleckstrin and Sec7 domain containing 3 -0.0543115
PLAT plasminogen activator, tissue -0.0527704
MYADM myeloid-associated differentiation marker -0.0510248
COL5A2 collagen, type V, alpha 2 -0.049717
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0493194
GPC6 glypican 6 -0.0481674
B2M beta-2-microglobulin -0.0480247
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0474384
ARL15 ADP-ribosylation factor-like 15 -0.0460069
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0458148
UBC ubiquitin C -0.0454768
ATP13A3 ATPase type 13A3 -0.0449549
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0430492
TNIP1 TNFAIP3 interacting protein 1 -0.0421912
FNDC3B fibronectin type III domain containing 3B -0.0420837
SBF2 SET binding factor 2 -0.0403681
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0366848
FTH1 ferritin, heavy polypeptide 1 -0.0362488
KIFAP3 kinesin-associated protein 3 -0.0353229
COL3A1 collagen, type III, alpha 1 -0.0351067
THBS2 thrombospondin 2 -0.0337377
TMOD1 tropomodulin 1 -0.0335111
OPTN optineurin -0.0333977
ESYT2 extended synaptotagmin-like protein 2 -0.0323398
FRMD5 FERM domain containing 5 -0.0322746
CLU clusterin -0.0319196
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0313614
ELL2 elongation factor, RNA polymerase II, 2 -0.0304881
ARL4C ADP-ribosylation factor-like 4C -0.0295897
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0289863
LRRC49 leucine rich repeat containing 49 -0.0288746
RBM25 RNA binding motif protein 25 -0.0285875
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 -0.0281912
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0280014
MTSS1 metastasis suppressor 1 -0.0276575
ARRDC3 arrestin domain containing 3 -0.0274429
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0271684
WTAP Wilms tumor 1 associated protein -0.0271006
SH3BP5 SH3-domain binding protein 5 (BTK-associated) -0.0269395
WDFY1 WD repeat and FYVE domain containing 1 -0.0262163
MRPS6 mitochondrial ribosomal protein S6 -0.0259222
PRKD3 protein kinase D3 -0.0250688
CYLD cylindromatosis (turban tumor syndrome) -0.024966
CD99 CD99 molecule -0.0247683
SP3 Sp3 transcription factor -0.0245536
NKTR natural killer cell triggering receptor -0.0244815
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0238874
FNBP1 formin binding protein 1 -0.023675
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0229391
SETD5 SET domain containing 5 -0.0228898
SPAG9 sperm associated antigen 9 -0.0228143
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0227099
PLAUR plasminogen activator, urokinase receptor -0.0223754
NAMPT nicotinamide phosphoribosyltransferase -0.0221883
GOLGA4 golgin A4 -0.0221681
ACBD3 acyl-CoA binding domain containing 3 -0.0221424
PTMA prothymosin, alpha -0.022051
UGCG UDP-glucose ceramide glucosyltransferase -0.0220105
SLC22A23 solute carrier family 22, member 23 -0.0220087
COL6A1 collagen, type VI, alpha 1 -0.0219262
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.021902
C1D C1D nuclear receptor corepressor -0.021798
NGLY1 N-glycanase 1 -0.0215975
PDIA3 protein disulfide isomerase family A, member 3 -0.0215259
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0214849
ADAM17 ADAM metallopeptidase domain 17 -0.0214181
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0213629
TAPBP TAP binding protein (tapasin) -0.0212789
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0210736
GGNBP2 gametogenetin binding protein 2 -0.0208146
PHC3 polyhomeotic homolog 3 (Drosophila) -0.0208119
RASA2 RAS p21 protein activator 2 -0.020769
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0205742
CTSB cathepsin B -0.0205332
ZNF148 zinc finger protein 148 -0.0202423
INSIG1 insulin induced gene 1 -0.0200445
SKIC3 SKI3 subunit of superkiller complex -0.0200356
PRRX1 paired related homeobox 1 -0.0199548
LPCAT2 lysophosphatidylcholine acyltransferase 2 -0.0198476
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0197182
VIM vimentin -0.0196506
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) -0.019555
OGA O-GlcNAcase -0.0195222