Sinomenine_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Sinomenine perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Sinomenine_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0959848
ZSWIM6 zinc finger, SWIM-type containing 6 0.0727536
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0602877
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0595075
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0582989
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0492177
RAB7A RAB7A, member RAS oncogene family 0.0481284
TJP1 tight junction protein 1 0.0465016
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0451004
APLP2 amyloid beta (A4) precursor-like protein 2 0.0434964
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0433114
DSPP dentin sialophosphoprotein 0.0423542
ANXA1 annexin A1 0.0410459
AKAP13 A kinase (PRKA) anchor protein 13 0.0392131
USP53 ubiquitin specific peptidase 53 0.03852
RBM25 RNA binding motif protein 25 0.0370992
BLZF1 basic leucine zipper nuclear factor 1 0.0368456
ANKRD17 ankyrin repeat domain 17 0.0365491
GOLGB1 golgin B1 0.035231
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0346092
PPP1R13B protein phosphatase 1, regulatory subunit 13B 0.0333889
TPM3 tropomyosin 3 0.0333196
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0332944
SIK3 SIK family kinase 3 0.0320524
EXT1 exostosin glycosyltransferase 1 0.0311221
PRRC2C proline-rich coiled-coil 2C 0.0311133
PEAK1 pseudopodium-enriched atypical kinase 1 0.0306105
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.029123
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0286281
ANKHD1 ankyrin repeat and KH domain containing 1 0.0282596
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0280417
SEPTIN11 septin 11 0.0273808
DST dystonin 0.0271351
PGBD5 piggyBac transposable element derived 5 0.026514
HMGB2 high mobility group box 2 0.0264921
INTS6 integrator complex subunit 6 0.0263073
HDAC9 histone deacetylase 9 0.0262457
CENPF centromere protein F, 350/400kDa 0.0259544
ERBIN erbb2 interacting protein 0.025782
VCL vinculin 0.0254955
CUL3 cullin 3 0.0252763
CALU calumenin 0.0250764
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0248949
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0246923
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0246625
MCU mitochondrial calcium uniporter 0.0245072
TBC1D15 TBC1 domain family, member 15 0.024045
BRD2 bromodomain containing 2 0.0240086
FNIP1 folliculin interacting protein 1 0.0239662
PHACTR4 phosphatase and actin regulator 4 0.0235532
WWTR1 WW domain containing transcription regulator 1 0.0233962
MACC1 metastasis associated in colon cancer 1 0.0231636
UBE2H ubiquitin-conjugating enzyme E2H 0.0227439
OSBPL8 oxysterol binding protein-like 8 0.0226675
TMF1 TATA element modulatory factor 1 0.0223988
TUFT1 tuftelin 1 0.0222916
DSG2 desmoglein 2 0.022249
VGLL3 vestigial-like family member 3 0.022001
GPBP1 GC-rich promoter binding protein 1 0.0217929
NUP98 nucleoporin 98kDa 0.0209666
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0207992
FBXO11 F-box protein 11 0.0207113
MED13 mediator complex subunit 13 0.0206808
IFRD1 interferon-related developmental regulator 1 0.020485
SERINC5 serine incorporator 5 0.0203555
CSNK1A1 casein kinase 1, alpha 1 0.0203342
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0202971
ZFC3H1 zinc finger, C3H1-type containing 0.0202503
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.0201965
MACF1 microtubule-actin crosslinking factor 1 0.0200812
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0200631
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0200034
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0199781
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0199051
RIGI RNA sensor RIG-I 0.0198904
ETV6 ets variant 6 0.0198522
MSN moesin 0.0196695
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0194824
MCL1 myeloid cell leukemia 1 0.0194175
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0193989
ZFYVE16 zinc finger, FYVE domain containing 16 0.0193235
MYO1D myosin ID 0.0192213
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0191663
HSPA8 heat shock 70kDa protein 8 0.0190288
SFPQ splicing factor proline/glutamine-rich 0.0189983
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0189257
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.018872
TNRC6B trinucleotide repeat containing 6B 0.0188391
KDM2A lysine (K)-specific demethylase 2A 0.0187449
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.0187053
SON SON DNA binding protein 0.018687
KAT6A K(lysine) acetyltransferase 6A 0.0186571
PSEN1 presenilin 1 0.0186349
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0186288
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0185764
MAP1B microtubule-associated protein 1B 0.0183436
TTC17 tetratricopeptide repeat domain 17 0.0182648
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.018192
GPBP1L1 GC-rich promoter binding protein 1-like 1 0.0181205
DCAF7 DDB1 and CUL4 associated factor 7 0.0180743

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.272515
NDRG1 N-myc downstream regulated 1 -0.248561
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.21549
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.140254
POTEF POTE ankyrin domain family, member F -0.121906
ACTG1 actin gamma 1 -0.105252
S100A6 S100 calcium binding protein A6 -0.101641
TMSB10 thymosin beta 10 -0.0976928
RPL35A ribosomal protein L35a -0.0914127
FNDC3B fibronectin type III domain containing 3B -0.0894431
ASPH aspartate beta-hydroxylase -0.0881017
IGFBP3 insulin-like growth factor binding protein 3 -0.087215
ELL2 elongation factor, RNA polymerase II, 2 -0.0867959
LIMCH1 LIM and calponin homology domains 1 -0.0843039
FTL ferritin, light polypeptide -0.0831757
NPEPPS aminopeptidase puromycin sensitive -0.0788566
HMGA1 high mobility group AT-hook 1 -0.0766207
TOP1 topoisomerase (DNA) I -0.0737943
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.071616
PTMA prothymosin, alpha -0.069905
FTH1 ferritin, heavy polypeptide 1 -0.0692866
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0689407
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0655118
LMO7 LIM domain 7 -0.0652718
LOC112694756 uncharaterized LOC112694756 -0.0639532
PGK1 phosphoglycerate kinase 1 -0.0619703
TRIO trio Rho guanine nucleotide exchange factor -0.0612234
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0584241
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0569821
RPL34 ribosomal protein L34 -0.0561152
BHLHE40 basic helix-loop-helix family, member e40 -0.0558257
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0546043
RPL8 ribosomal protein L8 -0.0530959
LPP LIM domain containing preferred translocation partner in lipoma -0.0528264
CCND1 cyclin D1 -0.0500874
S100A10 S100 calcium binding protein A10 -0.0500464
RPL23 ribosomal protein L23 -0.0498719
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0497208
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0496818
TSC22D2 TSC22 domain family, member 2 -0.0493026
GNAS GNAS complex locus -0.0478668
KRT7 keratin 7, type II -0.0478132
GRB10 growth factor receptor-bound protein 10 -0.0476944
EFNA5 ephrin-A5 -0.0470065
ANXA2 annexin A2 -0.0457317
TMSB4X thymosin beta 4, X-linked -0.0456259
RPLP1 ribosomal protein, large, P1 -0.0455323
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.04535
RPS23 ribosomal protein S23 -0.0443584
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0440724
ISG15 ISG15 ubiquitin-like modifier -0.0432624
KLF6 Kruppel-like factor 6 -0.0432343
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0429849
RPL32 ribosomal protein L32 -0.0428833
NAMPT nicotinamide phosphoribosyltransferase -0.0423625
SLC38A1 solute carrier family 38, member 1 -0.0418941
RPS19 ribosomal protein S19 -0.0416561
CTSB cathepsin B -0.040308
FAM3C family with sequence similarity 3, member C -0.039764
TMEM123 transmembrane protein 123 -0.0394236
FAM162A family with sequence similarity 162, member A -0.0393179
PKM pyruvate kinase, muscle -0.0390814
CDCP1 CUB domain containing protein 1 -0.0388888
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0385784
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0375202
TM4SF1 transmembrane 4 L six family member 1 -0.0370085
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.036806
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0362769
F3 coagulation factor III (thromboplastin, tissue factor) -0.0361969
ADAM9 ADAM metallopeptidase domain 9 -0.0360397
CD2AP CD2-associated protein -0.0359302
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.035877
RPL11 ribosomal protein L11 -0.0357695
SACK1A scaffolding CK1 anchoring protein A -0.0357038
RPS24 ribosomal protein S24 -0.0356562
IFI27 interferon, alpha-inducible protein 27 -0.0355937
RPS6 ribosomal protein S6 -0.0355263
TKT transketolase -0.0354835
CAPN2 calpain 2, (m/II) large subunit -0.0349419
TMEM165 transmembrane protein 165 -0.0343932
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0342757
CD47 CD47 molecule -0.0342073
IFITM1 interferon induced transmembrane protein 1 -0.0340855
RPS21 ribosomal protein S21 -0.0329522
CD46 CD46 molecule, complement regulatory protein -0.0325386
RPL19 ribosomal protein L19 -0.0322498
ARRDC3 arrestin domain containing 3 -0.0320495
TXNRD1 thioredoxin reductase 1 -0.0319881
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0313102
RACK1 receptor for activated C kinase 1 -0.0312912
MXD1 MAX dimerization protein 1 -0.0311837
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0311643
AHNAK AHNAK nucleoprotein -0.0311256
IFITM3 interferon induced transmembrane protein 3 -0.0310943
EIF1 eukaryotic translation initiation factor 1 -0.0309869
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0309653
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) -0.0309562
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 -0.0303393
HDLBP high density lipoprotein binding protein -0.0303016
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0302546