Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3J4-06A-11R-A20F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
Similar Terms
Downloads & Tools


266 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3J4-06A-11R-A20F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AASS aminoadipate-semialdehyde synthase
ABCA9 ATP-binding cassette, sub-family A (ABC1), member 9
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3
ADAM23 ADAM metallopeptidase domain 23
ADHFE1 alcohol dehydrogenase, iron containing, 1
ADRB2 adrenoceptor beta 2, surface
AGBL3 ATP/GTP binding protein-like 3
AHCYL2 adenosylhomocysteinase-like 2
AKAP3 A kinase (PRKA) anchor protein 3
AKAP9 A kinase (PRKA) anchor protein 9
ALAD aminolevulinate dehydratase
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2
AMH anti-Mullerian hormone
AMIGO3 adhesion molecule with Ig-like domain 3
ANKRD50 ankyrin repeat domain 50
ARID3C AT rich interactive domain 3C (BRIGHT-like)
ARMC10 armadillo repeat containing 10
ASAP1-IT1 ASAP1 intronic transcript 1
ASB11 ankyrin repeat and SOCS box containing 11, E3 ubiquitin protein ligase
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
AZGP1 alpha-2-glycoprotein 1, zinc-binding
C11ORF42 chromosome 11 open reading frame 42
C17ORF78 chromosome 17 open reading frame 78
C22ORF23 chromosome 22 open reading frame 23
C7ORF61 chromosome 7 open reading frame 61
CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta
CASD1 CAS1 domain containing 1
CAV1 caveolin 1, caveolae protein, 22kDa
CAV2 caveolin 2
CBWD2 COBW domain containing 2
CCDC146 coiled-coil domain containing 146
CCDC160 coiled-coil domain containing 160
CCDC183 coiled-coil domain containing 183
CCDC39 coiled-coil domain containing 39
CCDC62 coiled-coil domain containing 62
CCNG1 cyclin G1
CFL1P1 cofilin 1 (non-muscle) pseudogene 1
CHD3 chromodomain helicase DNA binding protein 3
CLDN15 claudin 15
COBLL1 cordon-bleu WH2 repeat protein-like 1
CUL1 cullin 1
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1
DAZ2 deleted in azoospermia 2
DEAF1 DEAF1 transcription factor
DHRS4L1 dehydrogenase/reductase (SDR family) member 4 like 1
DHRS4L2 dehydrogenase/reductase (SDR family) member 4 like 2
DIAPH2 diaphanous-related formin 2
DLD dihydrolipoamide dehydrogenase
DMD dystrophin
DPYSL4 dihydropyrimidinase-like 4
DTX2P1-UPK3BP1-PMS2P11 DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene
DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1
EDNRB endothelin receptor type B
EFCAB5 EF-hand calcium binding domain 5
EFNB3 ephrin-B3
EN2 engrailed homeobox 2
ENOX1 ecto-NOX disulfide-thiol exchanger 1
EPHB4 EPH receptor B4
ESRP1 epithelial splicing regulatory protein 1
EXOC4 exocyst complex component 4
FAM27C family with sequence similarity 27, member C
FAM3C family with sequence similarity 3, member C
FAM69C family with sequence similarity 69, member C
FBXO17 F-box protein 17
FLJ12825 uncharacterized LOC440101
FNDC8 fibronectin type III domain containing 8
FOXD4L5 forkhead box D4-like 5
FOXF2 forkhead box F2
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11
GALR3 galanin receptor 3
GHRHR growth hormone releasing hormone receptor
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3
GNG11 guanine nucleotide binding protein (G protein), gamma 11
GPAT2 glycerol-3-phosphate acyltransferase 2, mitochondrial
GPNMB glycoprotein (transmembrane) nmb
GPR155 G protein-coupled receptor 155
GRP gastrin-releasing peptide
GTF2H2 general transcription factor IIH, polypeptide 2, 44kDa
GTF2IRD2P1 GTF2I repeat domain containing 2 pseudogene 1
GXYLT2 glucoside xylosyltransferase 2
H1F0 H1 histone family, member 0
H2AFZ H2A histone family, member Z
HADH hydroxyacyl-CoA dehydrogenase
HAUS6 HAUS augmin-like complex, subunit 6
HDHD2 haloacid dehalogenase-like hydrolase domain containing 2
HIBADH 3-hydroxyisobutyrate dehydrogenase
HIST1H2AA histone cluster 1, H2aa
HMMR hyaluronan-mediated motility receptor (RHAMM)
HOXA11 homeobox A11
HOXA11-AS HOXA11 antisense RNA
HOXD12 homeobox D12
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5
HSBP1L1 heat shock factor binding protein 1-like 1
HTR3D 5-hydroxytryptamine (serotonin) receptor 3D, ionotropic
HYLS1 hydrolethalus syndrome 1
IHH indian hedgehog
ING3 inhibitor of growth family, member 3
IRF4 interferon regulatory factor 4
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KDM3A lysine (K)-specific demethylase 3A
KGFLP2 keratinocyte growth factor-like protein 2
KIAA1875 KIAA1875
KLF15 Kruppel-like factor 15
KLHL21 kelch-like family member 21
KRIT1 KRIT1, ankyrin repeat containing
KRTAP20-4 keratin associated protein 20-4
LAMB1 laminin, beta 1
LAMB2P1 laminin, beta 2 pseudogene 1
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial)
LAPTM4B lysosomal protein transmembrane 4 beta
LEFTY1 left-right determination factor 1
LIMCH1 LIM and calponin homology domains 1
LINC00238 long intergenic non-protein coding RNA 238
LINC00341 long intergenic non-protein coding RNA 341
LINGO2 leucine rich repeat and Ig domain containing 2
LOC647859 occludin pseudogene
LOC90246 uncharacterized LOC90246
LRRTM4 leucine rich repeat transmembrane neuronal 4
LTBP4 latent transforming growth factor beta binding protein 4
LZTS3 leucine zipper, putative tumor suppressor family member 3
MAP2 microtubule-associated protein 2
MCC mutated in colorectal cancers
MCM3AP-AS1 MCM3AP antisense RNA 1
MCM4 minichromosome maintenance complex component 4
MEPCE methylphosphate capping enzyme
MID1 midline 1
MLEC malectin
MTERF1 mitochondrial transcription termination factor 1
NANOS2 nanos homolog 2 (Drosophila)
NCAM2 neural cell adhesion molecule 2
NHEJ1 nonhomologous end-joining factor 1
NHLRC4 NHL repeat containing 4
NIN ninein (GSK3B interacting protein)
NLGN1 neuroligin 1
NOM1 nucleolar protein with MIF4G domain 1
NRBP2 nuclear receptor binding protein 2
NRCAM neuronal cell adhesion molecule
NSRP1 nuclear speckle splicing regulatory protein 1
NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6
NUPR1 nuclear protein, transcriptional regulator, 1
NUTM2F NUT family member 2F
OMG oligodendrocyte myelin glycoprotein
OR10A4 olfactory receptor, family 10, subfamily A, member 4
OR13D1 olfactory receptor, family 13, subfamily D, member 1
OR1L4 olfactory receptor, family 1, subfamily L, member 4
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR5D14 olfactory receptor, family 5, subfamily D, member 14
OR5W2 olfactory receptor, family 5, subfamily W, member 2
OR6K3 olfactory receptor, family 6, subfamily K, member 3
OSBPL1A oxysterol binding protein-like 1A
OTC ornithine carbamoyltransferase
OVCH1 ovochymase 1
P2RY11 purinergic receptor P2Y, G-protein coupled, 11
PABPC1 poly(A) binding protein, cytoplasmic 1
PABPC3 poly(A) binding protein, cytoplasmic 3
PABPC5 poly(A) binding protein, cytoplasmic 5
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1
PAXIP1 PAX interacting (with transcription-activation domain) protein 1
PCDHGB7 protocadherin gamma subfamily B, 7
PDDC1 Parkinson disease 7 domain containing 1
PDZRN3 PDZ domain containing ring finger 3
PIAS2 protein inhibitor of activated STAT, 2
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PKNOX1 PBX/knotted 1 homeobox 1
PLD6 phospholipase D family, member 6
PLEKHA5 pleckstrin homology domain containing, family A member 5
PMPCB peptidase (mitochondrial processing) beta
POLR2J2 polymerase (RNA) II (DNA directed) polypeptide J2
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
POTEE POTE ankyrin domain family, member E
POU3F2 POU class 3 homeobox 2
PPA2 pyrophosphatase (inorganic) 2
PPM1N protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
PRKRIP1 PRKR interacting protein 1 (IL11 inducible)
PROZ protein Z, vitamin K-dependent plasma glycoprotein
PUS7 pseudouridylate synthase 7 (putative)
RECK reversion-inducing-cysteine-rich protein with kazal motifs
REPIN1 replication initiator 1
RNF207 ring finger protein 207
RPL8 ribosomal protein L8
RPLP0 ribosomal protein, large, P0
RPS12 ribosomal protein S12
RPS4Y1 ribosomal protein S4, Y-linked 1
RPS8 ribosomal protein S8
RPSAP58 ribosomal protein SA pseudogene 58
RSBN1L round spermatid basic protein 1-like
RSL1D1 ribosomal L1 domain containing 1
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SLC10A5 solute carrier family 10, member 5
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SMAD6 SMAD family member 6
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SMC6 structural maintenance of chromosomes 6
SMURF1 SMAD specific E3 ubiquitin protein ligase 1
SNAI2 snail family zinc finger 2
SNORA15 small nucleolar RNA, H/ACA box 15
SNORA59B small nucleolar RNA, H/ACA box 59B
SOX2 SRY (sex determining region Y)-box 2
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
SPTAN1 spectrin, alpha, non-erythrocytic 1
ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4
STAG3 stromal antigen 3
STARD7 StAR-related lipid transfer (START) domain containing 7
STAT5A signal transducer and activator of transcription 5A
STK39 serine threonine kinase 39
STXBP1 syntaxin binding protein 1
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
TAS2R3 taste receptor, type 2, member 3
TFAP4 transcription factor AP-4 (activating enhancer binding protein 4)
THEM6 thioesterase superfamily member 6
TMEM133 transmembrane protein 133
TMEM243 transmembrane protein 243, mitochondrial
TMEM245 transmembrane protein 245
TMEM65 transmembrane protein 65
TMEM80 transmembrane protein 80
TMOD1 tropomodulin 1
TMTC2 transmembrane and tetratricopeptide repeat containing 2
TNK1 tyrosine kinase, non-receptor, 1
TOPAZ1 testis and ovary specific PAZ domain containing 1
TRIM2 tripartite motif containing 2
TRIM4 tripartite motif containing 4
TRIM51 tripartite motif-containing 51
TRIM56 tripartite motif containing 56
TRIP6 thyroid hormone receptor interactor 6
TRPM1 transient receptor potential cation channel, subfamily M, member 1
TSC22D4 TSC22 domain family, member 4
TSGA10 testis specific, 10
TTPA tocopherol (alpha) transfer protein
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
TUSC1 tumor suppressor candidate 1
UFSP1 UFM1-specific peptidase 1 (non-functional)
UNC119B unc-119 homolog B (C. elegans)
UPK2 uroplakin 2
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
VPS37D vacuolar protein sorting 37 homolog D (S. cerevisiae)
WDR60 WD repeat domain 60
XPC xeroderma pigmentosum, complementation group C
ZBED3 zinc finger, BED-type containing 3
ZNF425 zinc finger protein 425
ZNF767P zinc finger family member 767, pseudogene
ZNF786 zinc finger protein 786
ZNF800 zinc finger protein 800
ZSCAN21 zinc finger and SCAN domain containing 21
ZSCAN25 zinc finger and SCAN domain containing 25

low expression

Symbol Name
A1BG-AS1 A1BG antisense RNA 1
ACAA2 acetyl-CoA acyltransferase 2
C9ORF64 chromosome 9 open reading frame 64
ECI2 enoyl-CoA delta isomerase 2
HDAC1 histone deacetylase 1
INPP1 inositol polyphosphate-1-phosphatase
NTPCR nucleoside-triphosphatase, cancer-related
OAT ornithine aminotransferase
PXMP4 peroxisomal membrane protein 4, 24kDa
STK38 serine/threonine kinase 38
TMEM9 transmembrane protein 9
TRMT1L tRNA methyltransferase 1 homolog (S. cerevisiae)-like
UBE2E3 ubiquitin-conjugating enzyme E2E 3
ZBTB40 zinc finger and BTB domain containing 40
ZNF32 zinc finger protein 32
ZNF527 zinc finger protein 527
ZNF613 zinc finger protein 613
ZNF8 zinc finger protein 8