Syndactyly Gene Set

Dataset DisGeNET Gene-Disease Associations
Category disease or phenotype associations
Type disease
Description A synostosis that results_in the fusion of two or more digits. (Human Disease Ontology, DOID_11193)
External Link https://www.disgenet.org/browser/0/1/0/C1836206
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Genes

298 genes associated with the disease Syndactyly in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset.

Symbol Name
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9
ABHD5 abhydrolase domain containing 5
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ACSL3 acyl-CoA synthetase long-chain family member 3
ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif, 3
AGO2 argonaute RISC catalytic component 2
AKIRIN2 akirin 2
AKT1 v-akt murine thymoma viral oncogene homolog 1
AKTIP AKT interacting protein
ALX4 ALX homeobox 4
ANKRD11 ankyrin repeat domain 11
APC adenomatous polyposis coli
ARHGAP31 Rho GTPase activating protein 31
ARL6 ADP-ribosylation factor-like 6
ARL6IP6 ADP-ribosylation factor-like 6 interacting protein 6
ASXL1 additional sex combs like transcriptional regulator 1
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
AUTS2 autism susceptibility candidate 2
B3GLCT beta 3-glucosyltransferase
BBIP1 BBSome interacting protein 1
BBS1 Bardet-Biedl syndrome 1
BBS10 Bardet-Biedl syndrome 10
BBS12 Bardet-Biedl syndrome 12
BBS2 Bardet-Biedl syndrome 2
BBS4 Bardet-Biedl syndrome 4
BBS5 Bardet-Biedl syndrome 5
BBS7 Bardet-Biedl syndrome 7
BBS9 Bardet-Biedl syndrome 9
BCOR BCL6 corepressor
BCR breakpoint cluster region
BHLHA9 basic helix-loop-helix family, member a9
BLM Bloom syndrome, RecQ helicase-like
BMP2 bone morphogenetic protein 2
BMP4 bone morphogenetic protein 4
BMPR1B bone morphogenetic protein receptor, type IB
BMS1 BMS1 ribosome biogenesis factor
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
BRIP1 BRCA1 interacting protein C-terminal helicase 1
BTRC beta-transducin repeat containing E3 ubiquitin protein ligase
C5ORF42 chromosome 5 open reading frame 42
C8ORF37 chromosome 8 open reading frame 37
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit
CACNA1G calcium channel, voltage-dependent, T type, alpha 1G subunit
CCBE1 collagen and calcium binding EGF domains 1
CCDC22 coiled-coil domain containing 22
CCDC28B coiled-coil domain containing 28B
CD6 CD6 molecule
CD96 CD96 molecule
CDAN1 codanin 1
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH3 cadherin 3, type 1, P-cadherin (placental)
CEP120 centrosomal protein 120kDa
CEP290 centrosomal protein 290kDa
CHD7 chromodomain helicase DNA binding protein 7
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
CHSY1 chondroitin sulfate synthase 1
CKAP2L cytoskeleton associated protein 2-like
CKAP4 cytoskeleton-associated protein 4
COL7A1 collagen, type VII, alpha 1
CREBBP CREB binding protein
CRIPT cysteine-rich PDZ-binding protein
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like
CRMP1 collapsin response mediator protein 1
CTNND1 catenin (cadherin-associated protein), delta 1
CTNND2 catenin (cadherin-associated protein), delta 2
CUL4B cullin 4B
DACT1 dishevelled-binding antagonist of beta-catenin 1
DCHS1 dachsous cadherin-related 1
DEAF1 DEAF1 transcription factor
DHCR7 7-dehydrocholesterol reductase
DHODH dihydroorotate dehydrogenase (quinone)
DLL3 delta-like 3 (Drosophila)
DLL4 delta-like 4 (Drosophila)
DLX5 distal-less homeobox 5
DLX6 distal-less homeobox 6
DOCK6 dedicator of cytokinesis 6
DSP desmoplakin
DVL1 dishevelled segment polarity protein 1
DVL3 dishevelled segment polarity protein 3
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
DYNC2LI1 dynein, cytoplasmic 2, light intermediate chain 1
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
EED embryonic ectoderm development
EFNB1 ephrin-B1
EOGT EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
EP300 E1A binding protein p300
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
ERCC4 excision repair cross-complementation group 4
ERF Ets2 repressor factor
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2
EVC Ellis van Creveld protein
EVX2 even-skipped homeobox 2
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
FAM149B1 family with sequence similarity 149, member B1
FAM58A family with sequence similarity 58, member A
FAM92A1 family with sequence similarity 92, member A1
FANCA Fanconi anemia, complementation group A
FANCB Fanconi anemia, complementation group B
FANCC Fanconi anemia, complementation group C
FANCD2 Fanconi anemia, complementation group D2
FANCE Fanconi anemia, complementation group E
FANCF Fanconi anemia, complementation group F
FANCG Fanconi anemia, complementation group G
FANCI Fanconi anemia, complementation group I
FANCL Fanconi anemia, complementation group L
FANCM Fanconi anemia, complementation group M
FAT4 FAT atypical cadherin 4
FBLN1 fibulin 1
FBN1 fibrillin 1
FBN2 fibrillin 2
FERMT1 fermitin family member 1
FGD1 FYVE, RhoGEF and PH domain containing 1
FGFR1 fibroblast growth factor receptor 1
FGFR2 fibroblast growth factor receptor 2
FGFR3 fibroblast growth factor receptor 3
FIG4 FIG4 phosphoinositide 5-phosphatase
FLI1 Fli-1 proto-oncogene, ETS transcription factor
FLII flightless I homolog (Drosophila)
FLNA filamin A, alpha
FLNB filamin B, beta
FRAS1 Fraser extracellular matrix complex subunit 1
FREM2 FRAS1 related extracellular matrix protein 2
FZD2 frizzled class receptor 2
FZD4 frizzled class receptor 4
GDF5 growth differentiation factor 5
GJA1 gap junction protein, alpha 1, 43kDa
GJB6 gap junction protein, beta 6, 30kDa
GLI3 GLI family zinc finger 3
GPC3 glypican 3
GPC4 glypican 4
GRIP1 glutamate receptor interacting protein 1
HDAC4 histone deacetylase 4
HDAC8 histone deacetylase 8
HEPHL1 hephaestin-like 1
HES7 hes family bHLH transcription factor 7
HOXA11 homeobox A11
HOXA13 homeobox A13
HOXD10 homeobox D10
HOXD12 homeobox D12
HOXD13 homeobox D13
HOXD8 homeobox D8
HOXD9 homeobox D9
HPD 4-hydroxyphenylpyruvate dioxygenase
ICK intestinal cell (MAK-like) kinase
IFT122 intraflagellar transport 122
IFT140 intraflagellar transport 140
IFT172 intraflagellar transport 172
IFT27 intraflagellar transport 27
IFT43 intraflagellar transport 43
IFT52 intraflagellar transport 52
IFT80 intraflagellar transport 80
IFT81 intraflagellar transport 81
IGF2 insulin-like growth factor 2
IHH indian hedgehog
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IQSEC2 IQ motif and Sec7 domain 2
IRF6 interferon regulatory factor 6
JAG2 jagged 2
KCNJ2 potassium channel, inwardly rectifying subfamily J, member 2
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8
KIAA0753 KIAA0753
KIF1B kinesin family member 1B
KIF7 kinesin family member 7
KIFBP kinesin family binding protein
KMT2A lysine (K)-specific methyltransferase 2A
LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
LIG4 ligase IV, DNA, ATP-dependent
LMBR1 limb development membrane protein 1
LMNA lamin A/C
LRP4 low density lipoprotein receptor-related protein 4
LZTFL1 leucine zipper transcription factor-like 1
MAD2L2 MAD2 mitotic arrest deficient-like 2 (yeast)
MAN1B1 mannosidase, alpha, class 1B, member 1
MAPK1 mitogen-activated protein kinase 1
MECOM MDS1 and EVI1 complex locus
MED12 mediator complex subunit 12
MEF2C myocyte enhancer factor 2C
MEGF8 multiple EGF-like-domains 8
MESP2 mesoderm posterior basic helix-loop-helix transcription factor 2
MID1 midline 1
MKKS McKusick-Kaufman syndrome
MKS1 Meckel syndrome, type 1
MMUT methylmalonyl-CoA mutase
MSX1 msh homeobox 1
MSX2 msh homeobox 2
MUL1 mitochondrial E3 ubiquitin protein ligase 1
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
MYH3 myosin, heavy chain 3, skeletal muscle, embryonic
NAA10 N(alpha)-acetyltransferase 10, NatA catalytic subunit
NECTIN1 nectin cell adhesion molecule 1
NECTIN4 nectin cell adhesion molecule 4
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
NEK1 NIMA-related kinase 1
NEK9 NIMA-related kinase 9
NIPBL Nipped-B homolog (Drosophila)
NOG noggin
NOTCH1 notch 1
NPHP1 nephronophthisis 1 (juvenile)
NSD1 nuclear receptor binding SET domain protein 1
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
NXN nucleoredoxin
OFD1 oral-facial-digital syndrome 1
OTUD6B OTU domain containing 6B
PALB2 partner and localizer of BRCA2
PARK2 parkin RBR E3 ubiquitin protein ligase
PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta
PHF21A PHD finger protein 21A
PHGDH phosphoglycerate dehydrogenase
PHIP pleckstrin homology domain interacting protein
PIEZO2 piezo-type mechanosensitive ion channel component 2
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PLXND1 plexin D1
PNPLA6 patatin-like phospholipase domain containing 6
PORCN porcupine homolog (Drosophila)
PRKD1 protein kinase D1
PTDSS1 phosphatidylserine synthase 1
PTEN phosphatase and tensin homolog
RAB23 RAB23, member RAS oncogene family
RAD21 RAD21 homolog (S. pombe)
RAD51 RAD51 recombinase
RAD51C RAD51 paralog C
RAI1 retinoic acid induced 1
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
RB1 retinoblastoma 1
RBM10 RNA binding motif protein 10
RBM8A RNA binding motif protein 8A
RBPJ recombination signal binding protein for immunoglobulin kappa J region
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit
RFWD3 ring finger and WD repeat domain 3
RIPK4 receptor-interacting serine-threonine kinase 4
RIPPLY2 ripply transcriptional repressor 2
ROGDI rogdi homolog (Drosophila)
ROR2 receptor tyrosine kinase-like orphan receptor 2
RPE65 retinal pigment epithelium-specific protein 65kDa
RPL10 ribosomal protein L10
SALL1 spalt-like transcription factor 1
SALL4 spalt-like transcription factor 4
SC5D sterol-C5-desaturase
SDCCAG8 serologically defined colon cancer antigen 8
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
SETD5 SET domain containing 5
SF3B4 splicing factor 3b, subunit 4, 49kDa
SHFM1 split hand/foot malformation (ectrodactyly) type 1
SHH sonic hedgehog
SIN3A SIN3 transcription regulator family member A
SLC25A24 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
SLX4 SLX4 structure-specific endonuclease subunit
SMC1A structural maintenance of chromosomes 1A
SMC3 structural maintenance of chromosomes 3
SMO smoothened, frizzled class receptor
SMOC1 SPARC related modular calcium binding 1
SOST sclerostin
SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like
SUZ12 SUZ12 polycomb repressive complex 2 subunit
TBR1 T-box, brain, 1
TBX15 T-box 15
TBX22 T-box 22
TBX5 T-box 5
TCF12 transcription factor 12
TCTN3 tectonic family member 3
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
TFAP2B transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
TICRR TOPBP1-interacting checkpoint and replication regulator
TMEM216 transmembrane protein 216
TMEM256 transmembrane protein 256
TP63 tumor protein p63
TRIM32 tripartite motif containing 32
TTC21B tetratricopeptide repeat domain 21B
TTC30B tetratricopeptide repeat domain 30B
TTC8 tetratricopeptide repeat domain 8
TULP1 tubby like protein 1
TWIST1 twist family bHLH transcription factor 1
TWIST2 twist family bHLH transcription factor 2
TXNDC15 thioredoxin domain containing 15
UBE2T ubiquitin-conjugating enzyme E2T
UBE3A ubiquitin protein ligase E3A
UVRAG UV radiation resistance associated
VAC14 Vac14 homolog (S. cerevisiae)
VPS13B vacuolar protein sorting 13 homolog B (yeast)
VSX1 visual system homeobox 1
WASHC5 WASH complex subunit 5
WDPCP WD repeat containing planar cell polarity effector
WDR19 WD repeat domain 19
WDR34 WD repeat domain 34
WDR35 WD repeat domain 35
WDR60 WD repeat domain 60
WISP3 WNT1 inducible signaling pathway protein 3
WNT10B wingless-type MMTV integration site family, member 10B
WNT5A wingless-type MMTV integration site family, member 5A
WNT7A wingless-type MMTV integration site family, member 7A
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2
YY1AP1 YY1 associated protein 1
ZDHHC24 zinc finger, DHHC-type containing 24
ZNF385B zinc finger protein 385B
ZNF645 zinc finger protein 645
ZNF804A zinc finger protein 804A
ZSWIM6 zinc finger, SWIM-type containing 6