TAK-733_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description TAK-733 perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the TAK-733_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL5A1 collagen, type V, alpha 1 0.223207
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.162234
PLEC plectin 0.15287
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.1472
EXT1 exostosin glycosyltransferase 1 0.145465
COL6A3 collagen, type VI, alpha 3 0.14151
NAV1 neuron navigator 1 0.128635
CD44 CD44 molecule (Indian blood group) 0.128205
TRIO trio Rho guanine nucleotide exchange factor 0.119938
FN1 fibronectin 1 0.119813
MYH9 myosin, heavy chain 9, non-muscle 0.119767
VEGFA vascular endothelial growth factor A 0.0978947
SEPTIN9 septin 9 0.0958073
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0895345
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0891201
HMGA2 high mobility group AT-hook 2 0.0873321
DST dystonin 0.0827567
EEF2 eukaryotic translation elongation factor 2 0.0790632
ASPH aspartate beta-hydroxylase 0.0756414
FLNA filamin A, alpha 0.0712297
NDRG1 N-myc downstream regulated 1 0.0704293
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0647497
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0619647
COL6A1 collagen, type VI, alpha 1 0.0558243
MYO10 myosin X 0.0552544
MPRIP myosin phosphatase Rho interacting protein 0.0540477
ANXA2 annexin A2 0.0522294
HSPA8 heat shock 70kDa protein 8 0.051044
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0505568
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0498585
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0494166
MACF1 microtubule-actin crosslinking factor 1 0.0490615
COL6A2 collagen, type VI, alpha 2 0.0486697
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0478097
ZBTB38 zinc finger and BTB domain containing 38 0.0473248
ENO1 enolase 1, (alpha) 0.0472685
LOXL2 lysyl oxidase-like 2 0.0450143
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0447723
MLPH melanophilin 0.0433772
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0425191
MSN moesin 0.0422955
ATXN1 ataxin 1 0.0417875
PRKCA protein kinase C, alpha 0.0415575
EGFR epidermal growth factor receptor 0.0412455
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0405312
WNK1 WNK lysine deficient protein kinase 1 0.0402205
PTPRM protein tyrosine phosphatase, receptor type, M 0.0398768
SMAD3 SMAD family member 3 0.039391
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.0393496
PCBP3 poly(rC) binding protein 3 0.0391409
SMYD3 SET and MYND domain containing 3 0.0388164
ACTN1 actinin, alpha 1 0.0383198
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0382745
LPP LIM domain containing preferred translocation partner in lipoma 0.0382199
CLMP CXADR-like membrane protein 0.0379288
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0379157
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0378156
PRELID2 PRELI domain containing 2 0.0377993
ERRFI1 ERBB receptor feedback inhibitor 1 0.0377488
COL7A1 collagen, type VII, alpha 1 0.0373308
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0367375
DOCK5 dedicator of cytokinesis 5 0.0364785
ACTG1 actin gamma 1 0.0362754
ARHGAP22 Rho GTPase activating protein 22 0.0361992
VCL vinculin 0.0360753
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0355495
INTS6 integrator complex subunit 6 0.0355273
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0349069
AHNAK AHNAK nucleoprotein 0.0347519
BPTF bromodomain PHD finger transcription factor 0.03457
CAPN2 calpain 2, (m/II) large subunit 0.0344909
JARID2 jumonji, AT rich interactive domain 2 0.0341751
NAV2 neuron navigator 2 0.0339727
FAT1 FAT atypical cadherin 1 0.0338986
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0335704
ANKRD28 ankyrin repeat domain 28 0.0334567
BICD1 bicaudal D homolog 1 (Drosophila) 0.0329181
NALF1 NALCN channel auxiliary factor 1 0.0324836
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0322733
IGF1R insulin-like growth factor 1 receptor 0.0321341
RAI14 retinoic acid induced 14 0.0321333
LOC112694756 uncharaterized LOC112694756 0.0320955
LAMB3 laminin, beta 3 0.0319586
FLNB filamin B, beta 0.0319385
TPM3 tropomyosin 3 0.0314779
SAMD4A sterile alpha motif domain containing 4A 0.031467
STC1 stanniocalcin 1 0.0312708
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0312699
SFTPA2 surfactant protein A2 0.0309752
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0305301
NCOR2 nuclear receptor corepressor 2 0.0303366
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0301213
GLIS3 GLIS family zinc finger 3 0.0298617
TGFB1 transforming growth factor, beta 1 0.0297392
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0292674
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.029227
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0291815
PODXL podocalyxin-like 0.0291709
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0291577
CALR calreticulin 0.0290176

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.0779222
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0749836
ELL2 elongation factor, RNA polymerase II, 2 -0.0718174
VIM vimentin -0.060266
FAM13A family with sequence similarity 13, member A -0.0539207
TMSB10 thymosin beta 10 -0.0478374
NAMPT nicotinamide phosphoribosyltransferase -0.0463592
USP3 ubiquitin specific peptidase 3 -0.0455298
ZNF292 zinc finger protein 292 -0.0420108
IER3 immediate early response 3 -0.0351011
RLF rearranged L-myc fusion -0.0344079
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0344073
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0319882
WDR45B WD repeat domain 45B -0.0307214
RNMT RNA (guanine-7-) methyltransferase -0.0298041
SPAG9 sperm associated antigen 9 -0.0288534
OGA O-GlcNAcase -0.0260888
LCORL ligand dependent nuclear receptor corepressor-like -0.0259187
FAM162A family with sequence similarity 162, member A -0.0257856
RTN4 reticulon 4 -0.0249487
KMT2E lysine (K)-specific methyltransferase 2E -0.0241162
FTL ferritin, light polypeptide -0.0226856
GOLGA4 golgin A4 -0.0226681
MIS18BP1 MIS18 binding protein 1 -0.0224719
RNF145 ring finger protein 145 -0.0224392
RNF24 ring finger protein 24 -0.0221812
MIMS1 mitochondrial inner membrane scaffold 1 -0.0220047
KDM3A lysine (K)-specific demethylase 3A -0.0218811
ADM adrenomedullin -0.0217229
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0200995
CXCL8 chemokine (C-X-C motif) ligand 8 -0.019669
NPEPPS aminopeptidase puromycin sensitive -0.0196347
QKI QKI, KH domain containing, RNA binding -0.018958
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0187728
NUP58 nucleoporin 58 -0.0185973
SEC24A SEC24 family member A -0.0185803
CLEC1B C-type lectin domain family 1, member B -0.0185667
HILPDA hypoxia inducible lipid droplet-associated -0.0184962
WSB1 WD repeat and SOCS box containing 1 -0.0179858
KDM5B lysine (K)-specific demethylase 5B -0.017869
BTG1 B-cell translocation gene 1, anti-proliferative -0.0177532
NGLY1 N-glycanase 1 -0.0174246
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0174215
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0173748
TPX2 TPX2, microtubule-associated -0.0172559
RPS24 ribosomal protein S24 -0.0172464
GNAS GNAS complex locus -0.016746
NOP58 NOP58 ribonucleoprotein -0.0167232
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0164707
SGO2 shugoshin 2 -0.016439
ATP13A3 ATPase type 13A3 -0.016413
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0163781
MT2A metallothionein 2A -0.0156766
TM9SF3 transmembrane 9 superfamily member 3 -0.01557
HELZ helicase with zinc finger -0.0154846
FBXO42 F-box protein 42 -0.0152567
ARID4B AT rich interactive domain 4B (RBP1-like) -0.015121
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0150685
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0148705
MARCHF6 membrane associated ring-CH-type finger 6 -0.0148012
MXI1 MAX interactor 1, dimerization protein -0.0145868
RPLP1 ribosomal protein, large, P1 -0.0144293
HBP1 HMG-box transcription factor 1 -0.014418
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0143583
PNISR PNN-interacting serine/arginine-rich protein -0.0142804
INSIG2 insulin induced gene 2 -0.0142776
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0141945
RBM39 RNA binding motif protein 39 -0.0141573
SBF2 SET binding factor 2 -0.0141473
S100A6 S100 calcium binding protein A6 -0.0140437
UGCG UDP-glucose ceramide glucosyltransferase -0.0140056
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0139448
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 -0.0132667
ZMYM2 zinc finger, MYM-type 2 -0.0132656
LGALS1 lectin, galactoside-binding, soluble, 1 -0.013102
HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 -0.0130345
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0126969
SUCO SUN domain containing ossification factor -0.01254
TRA2A transformer 2 alpha homolog (Drosophila) -0.0124442
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0123748
RNF168 ring finger protein 168, E3 ubiquitin protein ligase -0.012343
CENPE centromere protein E, 312kDa -0.0123253
RYBP RING1 and YY1 binding protein -0.0123074
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0122261
FOXO3 forkhead box O3 -0.0121186
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0120367
RPL35A ribosomal protein L35a -0.0119402
ADAM9 ADAM metallopeptidase domain 9 -0.0118494
DDIT4 DNA-damage-inducible transcript 4 -0.0117971
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0117947
CNOT8 CCR4-NOT transcription complex, subunit 8 -0.0116717
IRS2 insulin receptor substrate 2 -0.0115231
TTK TTK protein kinase -0.0114871
CDC73 cell division cycle 73 -0.0114787
DUSP6 dual specificity phosphatase 6 -0.0114631
CENPF centromere protein F, 350/400kDa -0.0114579
HDAC3 histone deacetylase 3 -0.0112379
GARS1 glycyl-tRNA synthetase 1 -0.0112018
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0111435
PLAUR plasminogen activator, urokinase receptor -0.0111409