TAK-733_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description TAK-733 perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the TAK-733_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.462832
IGFBP3 insulin-like growth factor binding protein 3 0.268388
TGFBI transforming growth factor, beta-induced, 68kDa 0.229032
MYH9 myosin, heavy chain 9, non-muscle 0.190689
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.175724
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.162327
FN1 fibronectin 1 0.126255
HLA-B major histocompatibility complex, class I, B 0.105378
COL5A1 collagen, type V, alpha 1 0.103456
VEGFA vascular endothelial growth factor A 0.0942947
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0868536
CALR calreticulin 0.0800514
NDRG1 N-myc downstream regulated 1 0.0799643
ERRFI1 ERBB receptor feedback inhibitor 1 0.0798926
B2M beta-2-microglobulin 0.0769034
NRXN3 neurexin 3 0.0684735
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0675169
VIM vimentin 0.0670807
ENO1 enolase 1, (alpha) 0.066266
CANX calnexin 0.0657569
LOC112694756 uncharaterized LOC112694756 0.0632194
CD44 CD44 molecule (Indian blood group) 0.061177
LOXL2 lysyl oxidase-like 2 0.0593578
PLEC plectin 0.058905
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0581182
EEF2 eukaryotic translation elongation factor 2 0.0569462
SOD2 superoxide dismutase 2, mitochondrial 0.0553368
P4HB prolyl 4-hydroxylase, beta polypeptide 0.055196
TIMP3 TIMP metallopeptidase inhibitor 3 0.05188
SEC31A SEC31 homolog A (S. cerevisiae) 0.0517935
FLNA filamin A, alpha 0.0501223
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0495456
CALU calumenin 0.0495334
PDIA6 protein disulfide isomerase family A, member 6 0.0483554
ANXA2 annexin A2 0.0469926
FNDC3B fibronectin type III domain containing 3B 0.0452761
F3 coagulation factor III (thromboplastin, tissue factor) 0.0443143
CXCL8 chemokine (C-X-C motif) ligand 8 0.0438102
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0436422
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0430542
TRIO trio Rho guanine nucleotide exchange factor 0.0429023
CALD1 caldesmon 1 0.0417767
TTC3 tetratricopeptide repeat domain 3 0.0408617
COPA coatomer protein complex, subunit alpha 0.0404611
MACF1 microtubule-actin crosslinking factor 1 0.0403065
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0392244
HILPDA hypoxia inducible lipid droplet-associated 0.0390768
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0386713
HLA-C major histocompatibility complex, class I, C 0.0385202
STC2 stanniocalcin 2 0.0370796
HIP1 huntingtin interacting protein 1 0.0357643
COL6A2 collagen, type VI, alpha 2 0.0356072
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.035497
PDIA3 protein disulfide isomerase family A, member 3 0.0349622
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.034798
EXT1 exostosin glycosyltransferase 1 0.034594
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0341691
INTS6 integrator complex subunit 6 0.0334244
HDLBP high density lipoprotein binding protein 0.0331571
BHLHE40 basic helix-loop-helix family, member e40 0.0327619
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0327557
GOLGB1 golgin B1 0.0327312
SDC4 syndecan 4 0.0318195
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0317291
TMED2 transmembrane emp24 domain trafficking protein 2 0.0316747
GRB10 growth factor receptor-bound protein 10 0.0314511
HPCAL1 hippocalcin-like 1 0.0312128
AHNAK AHNAK nucleoprotein 0.0311205
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0306757
SAMD4A sterile alpha motif domain containing 4A 0.0301023
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0300918
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0300406
MLEC malectin 0.0300355
GLG1 golgi glycoprotein 1 0.029937
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0297925
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0297708
ARRDC3 arrestin domain containing 3 0.0295224
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0294977
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0294976
RIGI RNA sensor RIG-I 0.0294923
HDAC9 histone deacetylase 9 0.0293497
CADM1 cell adhesion molecule 1 0.0292567
LDHA lactate dehydrogenase A 0.0292495
JARID2 jumonji, AT rich interactive domain 2 0.0290746
ANO6 anoctamin 6 0.0288511
SRRM2 serine/arginine repetitive matrix 2 0.0283398
STC1 stanniocalcin 1 0.0279188
RAB1A RAB1A, member RAS oncogene family 0.0278347
SEC24D SEC24 family member D 0.0277561
CAPN2 calpain 2, (m/II) large subunit 0.0277536
PKM pyruvate kinase, muscle 0.027545
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0272733
PRELID2 PRELI domain containing 2 0.0272226
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0272224
HIPK2 homeodomain interacting protein kinase 2 0.026978
CTSB cathepsin B 0.0267774
VEGFC vascular endothelial growth factor C 0.0267769
HOOK2 hook microtubule-tethering protein 2 0.0267651
ACTN1 actinin, alpha 1 0.0266585
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0265942

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.103091
PTMA prothymosin, alpha -0.0451769
MT1X metallothionein 1X -0.0358803
PDE10A phosphodiesterase 10A -0.0318033
RPS24 ribosomal protein S24 -0.0298729
SMYD3 SET and MYND domain containing 3 -0.0282798
NALF1 NALCN channel auxiliary factor 1 -0.0265717
PCCA propionyl CoA carboxylase, alpha polypeptide -0.0251772
EFNA5 ephrin-A5 -0.0247134
PDE4D phosphodiesterase 4D, cAMP-specific -0.0238104
SRSF11 serine/arginine-rich splicing factor 11 -0.0228382
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0226771
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0219864
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0214
KMT2E lysine (K)-specific methyltransferase 2E -0.0208825
MAML3 mastermind-like 3 (Drosophila) -0.0206344
RBM25 RNA binding motif protein 25 -0.0205811
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0199419
ZNF292 zinc finger protein 292 -0.0196978
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0194362
DST dystonin -0.019148
RPL32 ribosomal protein L32 -0.0187883
RPL26 ribosomal protein L26 -0.0187739
LCORL ligand dependent nuclear receptor corepressor-like -0.0186481
ANLN anillin, actin binding protein -0.0184108
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0180053
MATR3 matrin 3 -0.0179918
IARS1 isoleucyl-tRNA synthetase 1 -0.0179685
RTN4 reticulon 4 -0.017932
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0178671
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0177654
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0176753
GNAS GNAS complex locus -0.0175839
PRKG1 protein kinase, cGMP-dependent, type I -0.0175454
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0175009
PTN pleiotrophin -0.0174667
WDPCP WD repeat containing planar cell polarity effector -0.0172882
ANKRD33B ankyrin repeat domain 33B -0.0171448
RPS2 ribosomal protein S2 -0.0169154
SLC38A1 solute carrier family 38, member 1 -0.0168844
FRMD6 FERM domain containing 6 -0.0167457
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0167156
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0166011
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0163801
OSBPL9 oxysterol binding protein-like 9 -0.0161869
DOCK7 dedicator of cytokinesis 7 -0.016162
MSI2 musashi RNA-binding protein 2 -0.016112
TM9SF3 transmembrane 9 superfamily member 3 -0.016092
JMJD1C jumonji domain containing 1C -0.0160694
RPLP2 ribosomal protein, large, P2 -0.0159443
BCAS3 breast carcinoma amplified sequence 3 -0.0156332
ZEB1 zinc finger E-box binding homeobox 1 -0.0155173
PSD3 pleckstrin and Sec7 domain containing 3 -0.0154078
RPL11 ribosomal protein L11 -0.0151374
RSF1 remodeling and spacing factor 1 -0.015035
H3-3B H3.3 histone B -0.0149442
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.0149273
ZMYND8 zinc finger, MYND-type containing 8 -0.0148696
RBM6 RNA binding motif protein 6 -0.0148566
FAF1 Fas (TNFRSF6) associated factor 1 -0.0145394
CKAP2 cytoskeleton associated protein 2 -0.0144752
PFN1 profilin 1 -0.0144135
EZR ezrin -0.0143197
NT5C2 5'-nucleotidase, cytosolic II -0.0143086
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) -0.0143032
CXCL3 chemokine (C-X-C motif) ligand 3 -0.0142571
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0142015
MPG N-methylpurine-DNA glycosylase -0.0141166
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0141129
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0140896
RNF216 ring finger protein 216 -0.0140718
MED13L mediator complex subunit 13-like -0.0139233
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0138757
RORA RAR-related orphan receptor A -0.0138731
PHKB phosphorylase kinase, beta -0.013697
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0136889
AUTS2 autism susceptibility candidate 2 -0.0136326
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0135695
RASA2 RAS p21 protein activator 2 -0.0135586
FAM133B family with sequence similarity 133, member B -0.0135346
TPD52 tumor protein D52 -0.0134916
NIPBL Nipped-B homolog (Drosophila) -0.0134845
EVI5 ecotropic viral integration site 5 -0.0134757
DCP2 decapping mRNA 2 -0.0134755
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0134415
QKI QKI, KH domain containing, RNA binding -0.0134324
RFWD3 ring finger and WD repeat domain 3 -0.0134225
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0133344
RFC3 replication factor C (activator 1) 3, 38kDa -0.013321
RPLP1 ribosomal protein, large, P1 -0.0132801
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0132183
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) -0.0131468
RBM27 RNA binding motif protein 27 -0.013144
BTBD9 BTB (POZ) domain containing 9 -0.0131245
NUBPL nucleotide binding protein-like -0.0130841
LNPK lunapark, ER junction formation factor -0.0130216
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0130098
STRN3 striatin, calmodulin binding protein 3 -0.0130022
HMGB2 high mobility group box 2 -0.0130019
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0130012