TAK-901_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description TAK-901 perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the TAK-901_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.161295
IER3 immediate early response 3 0.137961
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.135036
GPHN gephyrin 0.122062
RPS6 ribosomal protein S6 0.109772
RPS3 ribosomal protein S3 0.0854839
WDR43 WD repeat domain 43 0.0837166
KDM6A lysine (K)-specific demethylase 6A 0.0806464
PUM1 pumilio RNA-binding family member 1 0.0771003
RPL26 ribosomal protein L26 0.0755783
KMT2C lysine (K)-specific methyltransferase 2C 0.073879
PRRC2C proline-rich coiled-coil 2C 0.0736315
RBM25 RNA binding motif protein 25 0.0683554
EEF2 eukaryotic translation elongation factor 2 0.0677118
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0645607
CDPF1 cysteine-rich, DPF motif domain containing 1 0.0637774
PPP4R3A protein phosphatase 4 regulatory subunit 3A 0.0632468
RPS12 ribosomal protein S12 0.062554
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0622709
GOLGA4 golgin A4 0.0617169
MED13L mediator complex subunit 13-like 0.0611503
RPS19 ribosomal protein S19 0.0601054
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0577989
RPS17 ribosomal protein S17 0.0565346
RBM39 RNA binding motif protein 39 0.0542462
NOP58 NOP58 ribonucleoprotein 0.0540384
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0529185
TXNIP thioredoxin interacting protein 0.0527768
RLF rearranged L-myc fusion 0.0504174
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.049839
TPT1 tumor protein, translationally-controlled 1 0.049379
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0491154
ZNF292 zinc finger protein 292 0.0480246
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0467371
RPL37A ribosomal protein L37a 0.0466387
ADNP activity-dependent neuroprotector homeobox 0.0463071
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0458985
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0456211
GPBP1 GC-rich promoter binding protein 1 0.0449073
RHEB Ras homolog enriched in brain 0.0445904
RSRC2 arginine/serine-rich coiled-coil 2 0.04442
AREG amphiregulin 0.044178
RPL36 ribosomal protein L36 0.0428947
CCNL1 cyclin L1 0.0427681
RAD23B RAD23 homolog B (S. cerevisiae) 0.0427139
TSC22D2 TSC22 domain family, member 2 0.0424839
NIPBL Nipped-B homolog (Drosophila) 0.0423589
RPL5 ribosomal protein L5 0.0413522
SRRM2 serine/arginine repetitive matrix 2 0.0410751
RPLP2 ribosomal protein, large, P2 0.0409551
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0406135
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0404132
KAT6A K(lysine) acetyltransferase 6A 0.0398992
PUM2 pumilio RNA-binding family member 2 0.0397703
YBX1 Y box binding protein 1 0.0395174
ANKRD11 ankyrin repeat domain 11 0.0392994
EIF3H eukaryotic translation initiation factor 3, subunit H 0.03902
EWSR1 EWS RNA-binding protein 1 0.0388947
RPS29 ribosomal protein S29 0.0388705
RAB7A RAB7A, member RAS oncogene family 0.038428
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0381917
RPL11 ribosomal protein L11 0.038158
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0377463
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0375042
CSNK1A1 casein kinase 1, alpha 1 0.0372607
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0372483
MATR3 matrin 3 0.0371939
KMT2E lysine (K)-specific methyltransferase 2E 0.0365847
PDE4B phosphodiesterase 4B, cAMP-specific 0.0353422
SENP6 SUMO1/sentrin specific peptidase 6 0.0349791
FOXJ3 forkhead box J3 0.0348077
FAT1 FAT atypical cadherin 1 0.0347011
CEP85L centrosomal protein 85kDa-like 0.0345759
PRPF8 pre-mRNA processing factor 8 0.0342545
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0339661
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0337203
SCAF8 SR-related CTD-associated factor 8 0.0337033
MARCHF6 membrane associated ring-CH-type finger 6 0.0337014
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0334824
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0332965
BRD2 bromodomain containing 2 0.0332021
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.0331722
RPS18 ribosomal protein S18 0.0331183
ZFAND3 zinc finger, AN1-type domain 3 0.0327137
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0323687
RPS2 ribosomal protein S2 0.0320655
JMJD1C jumonji domain containing 1C 0.031438
TRA2A transformer 2 alpha homolog (Drosophila) 0.0313301
ANKHD1 ankyrin repeat and KH domain containing 1 0.0312508
YTHDC1 YTH domain containing 1 0.0312377
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0309824
USP47 ubiquitin specific peptidase 47 0.0309512
NR1D2 nuclear receptor subfamily 1, group D, member 2 0.030878
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0304365
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0303868
CUL3 cullin 3 0.0303425
USPL1 ubiquitin specific peptidase like 1 0.0303092
RAB1A RAB1A, member RAS oncogene family 0.0303089
BCLAF1 BCL2-associated transcription factor 1 0.0303006
PALS2 protein associated with LIN7 2, MAGUK p55 family member 0.0302264

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.246055
HMGA2 high mobility group AT-hook 2 -0.086726
PTMA prothymosin, alpha -0.0860578
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.078407
FERMT1 fermitin family member 1 -0.0651038
LAMB3 laminin, beta 3 -0.0646318
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0573801
FRAS1 Fraser extracellular matrix complex subunit 1 -0.0493107
RAD51B RAD51 paralog B -0.0491237
LAMA4 laminin, alpha 4 -0.0487343
RCOR1 REST corepressor 1 -0.0479883
FLOT1 flotillin 1 -0.0453007
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0422601
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0414341
VCL vinculin -0.0413982
ACTG1 actin gamma 1 -0.0392297
CD9 CD9 molecule -0.0387991
FHIT fragile histidine triad -0.0382807
EGR1 early growth response 1 -0.0376359
IGFBP3 insulin-like growth factor binding protein 3 -0.0372559
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0370526
EGFR epidermal growth factor receptor -0.0363223
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0346109
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0341073
KLF5 Kruppel-like factor 5 (intestinal) -0.0310556
CLTC clathrin, heavy chain (Hc) -0.0298889
CCSER1 coiled-coil serine-rich protein 1 -0.0284341
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0282589
SERINC5 serine incorporator 5 -0.0279629
EHBP1 EH domain binding protein 1 -0.0272632
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0270129
ITPKC inositol-trisphosphate 3-kinase C -0.0269596
MTAP methylthioadenosine phosphorylase -0.0267728
KLF3 Kruppel-like factor 3 (basic) -0.0250625
DSPP dentin sialophosphoprotein -0.024887
LDHA lactate dehydrogenase A -0.023301
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) -0.0227377
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0226927
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0223991
GPC5 glypican 5 -0.0219223
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0216091
EMP1 epithelial membrane protein 1 -0.0205704
DSG2 desmoglein 2 -0.02021
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0199221
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 -0.0196469
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0195724
CUX1 cut-like homeobox 1 -0.0195413
CREB5 cAMP responsive element binding protein 5 -0.0193253
TPM4 tropomyosin 4 -0.0187053
XYLT1 xylosyltransferase I -0.0186825
NDRG1 N-myc downstream regulated 1 -0.0185971
DEK DEK proto-oncogene -0.0184428
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 -0.0182118
CANX calnexin -0.0178281
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0177938
TUBB tubulin, beta class I -0.0177677
KLF10 Kruppel-like factor 10 -0.0177339
PERP PERP, TP53 apoptosis effector -0.0177098
LAMC2 laminin, gamma 2 -0.0176446
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.017609
EXOC4 exocyst complex component 4 -0.0175531
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0174145
PATJ PATJ crumbs cell polarity complex component -0.0171719
PGK1 phosphoglycerate kinase 1 -0.0170785
PRELID2 PRELI domain containing 2 -0.0167342
MPRIP myosin phosphatase Rho interacting protein -0.0165944
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0164463
ANLN anillin, actin binding protein -0.0164318
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0162766
BMP4 bone morphogenetic protein 4 -0.0162362
KLK10 kallikrein-related peptidase 10 -0.0159855
FHL2 four and a half LIM domains 2 -0.0156092
TMEM123 transmembrane protein 123 -0.015551
BAMBI BMP and activin membrane-bound inhibitor -0.0154954
LARS1 leucyl-tRNA synthetase 1 -0.0154271
ABR active BCR-related -0.0153218
DENND1A DENN/MADD domain containing 1A -0.0151148
LEMD1 LEM domain containing 1 -0.0150129
ITGB4 integrin, beta 4 -0.0149973
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0149373
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 -0.0147949
THSD4 thrombospondin, type I, domain containing 4 -0.0147934
SNX14 sorting nexin 14 -0.0145195
HDAC2 histone deacetylase 2 -0.0142404
SGPP2 sphingosine-1-phosphate phosphatase 2 -0.0142391
HMGB1 high mobility group box 1 -0.0141481
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.0137839
COPB1 coatomer protein complex, subunit beta 1 -0.0136503
KLF6 Kruppel-like factor 6 -0.0135734
CTSB cathepsin B -0.0134994
HDAC4 histone deacetylase 4 -0.0134236
KRT19 keratin 19, type I -0.0133885
EFNB2 ephrin-B2 -0.0133237
DDR1 discoidin domain receptor tyrosine kinase 1 -0.0133221
NCEH1 neutral cholesterol ester hydrolase 1 -0.0132901
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0132057
HILPDA hypoxia inducible lipid droplet-associated -0.013202
AOPEP aminopeptidase O (putative) -0.0131332
KPNB1 karyopherin (importin) beta 1 -0.0128901
OSBPL10 oxysterol binding protein-like 10 -0.0128747