TCCSUP Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
Description disease: transitional cell carcinoma (Cell Line Ontology, CLO_0009283)
Similar Terms
Downloads & Tools

Genes

225 genes with high or low expression in TCCSUP relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
DIRAS3 DIRAS family, GTP-binding RAS-like 3 2.95651
FASTKD3 FAST kinase domains 3 2.75714
ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 2.6564
RPP30 ribonuclease P/MRP 30kDa subunit 2.48576
SPANXC SPANX family, member C 2.47116
TEK TEK tyrosine kinase, endothelial 2.42218
UGT1A10 UDP glucuronosyltransferase 1 family, polypeptide A10 2.3964
FMO3 flavin containing monooxygenase 3 2.38901
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4 2.38856
RAD1 RAD1 checkpoint DNA exonuclease 2.32849
C1GALT1C1 C1GALT1-specific chaperone 1 2.26361
FABP2 fatty acid binding protein 2, intestinal 2.22271
CD36 CD36 molecule (thrombospondin receptor) 2.16484
PCDH7 protocadherin 7 2.07696
ZSCAN31 zinc finger and SCAN domain containing 31 2.05289
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 2.03345
GNAT3 guanine nucleotide binding protein, alpha transducing 3 2.02282
E2F3 E2F transcription factor 3 1.91704
HSPB3 heat shock 27kDa protein 3 1.89675
OSMR oncostatin M receptor 1.85843
OXCT1 3-oxoacid CoA transferase 1 1.8539
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 1.85207
PRDX6 peroxiredoxin 6 1.85165
SAR1A secretion associated, Ras related GTPase 1A 1.8261
OASL 2'-5'-oligoadenylate synthetase-like 1.81533
ACTG2 actin, gamma 2, smooth muscle, enteric 1.79664
PRKG2 protein kinase, cGMP-dependent, type II 1.79519
SPDL1 spindle apparatus coiled-coil protein 1 1.78966
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18 1.7669
PCDHB11 protocadherin beta 11 1.73583
MATN3 matrilin 3 1.73359
PZP pregnancy-zone protein 1.73115
C2 complement component 2 1.72836
NUP155 nucleoporin 155kDa 1.7156
NEK7 NIMA-related kinase 7 1.69631
TWISTNB TWIST neighbor 1.69514
COLEC10 collectin sub-family member 10 (C-type lectin) 1.69167
DPYSL3 dihydropyrimidinase-like 3 1.66125
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2 1.65867
IFIT5 interferon-induced protein with tetratricopeptide repeats 5 1.65757
FAP fibroblast activation protein, alpha 1.65041
ADAM12 ADAM metallopeptidase domain 12 1.64293
AADAC arylacetamide deacetylase 1.63774
DCN decorin 1.62894
PPAP2A phosphatidic acid phosphatase type 2A 1.59777
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit 1.59664
FZD7 frizzled class receptor 7 1.59639
GIMAP4 GTPase, IMAP family member 4 1.58896
CNN1 calponin 1, basic, smooth muscle 1.58123
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6 1.57799
POP5 processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae) 1.57652
NCAPG2 non-SMC condensin II complex, subunit G2 1.57184
LRRC17 leucine rich repeat containing 17 1.57128
POSTN periostin, osteoblast specific factor 1.56981
TCEB2 transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) 1.56923
EDIL3 EGF-like repeats and discoidin I-like domains 3 1.56758
MEST mesoderm specific transcript 1.56128
ERMP1 endoplasmic reticulum metallopeptidase 1 1.55765
SLC12A8 solute carrier family 12, member 8 1.55661
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1 1.5544
TAS2R13 taste receptor, type 2, member 13 1.55391
DPT dermatopontin 1.55167
BEST2 bestrophin 2 1.52848
ICE1 interactor of little elongation complex ELL subunit 1 1.52311
BRIX1 BRX1, biogenesis of ribosomes 1.50928
DDX4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 1.49926
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 1.49129
PLXDC1 plexin domain containing 1 1.49033
TGM4 transglutaminase 4 1.4879
WDR70 WD repeat domain 70 1.48292
CFAP74 cilia and flagella associated protein 74 1.48272
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 1.48199
HNRNPA3P1 heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 1.47858
PAPD7 PAP associated domain containing 7 1.47742
MICU1 mitochondrial calcium uptake 1 1.47599
CENPI centromere protein I 1.46923
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 1.46129
MARCH3 membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase 1.46102
CRHBP corticotropin releasing hormone binding protein 1.45995
PYY peptide YY 1.45761
PDCD1LG2 programmed cell death 1 ligand 2 1.45739
EFR3B EFR3 homolog B (S. cerevisiae) 1.45632
IL7R interleukin 7 receptor 1.44692
RAI14 retinoic acid induced 14 1.44329
AQP9 aquaporin 9 1.4422
LUM lumican 1.44166
TLR4 toll-like receptor 4 1.4395
ZG16 zymogen granule protein 16 1.43778
PAIP1 poly(A) binding protein interacting protein 1 1.42088
STX2 syntaxin 2 1.41791

low expression

Symbol Name Standardized Value
UBXN6 UBX domain protein 6 -3.53725
TARBP2 TAR (HIV-1) RNA binding protein 2 -3.01443
WDR43 WD repeat domain 43 -2.83391
ACSL1 acyl-CoA synthetase long-chain family member 1 -2.73192
ZBTB10 zinc finger and BTB domain containing 10 -2.644
ZNF395 zinc finger protein 395 -2.60116
DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1) -2.55725
LMAN2L lectin, mannose-binding 2-like -2.46897
HOMER1 homer scaffolding protein 1 -2.45574
TTLL4 tubulin tyrosine ligase-like family member 4 -2.45131
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 -2.41945
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) -2.34442
OAT ornithine aminotransferase -2.32928
FKBP4 FK506 binding protein 4, 59kDa -2.29478
ZNF34 zinc finger protein 34 -2.29226
LETM1 leucine zipper-EF-hand containing transmembrane protein 1 -2.28531
RIOK3 RIO kinase 3 -2.28176
SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D -2.27208
STX18 syntaxin 18 -2.26601
ACVR2B activin A receptor, type IIB -2.19232
MARCH8 membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase -2.15489
ADIPOR2 adiponectin receptor 2 -2.12001
ZNHIT2 zinc finger, HIT-type containing 2 -2.08462
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1 -2.0462
MPPE1 metallophosphoesterase 1 -2.02861
KCMF1 potassium channel modulatory factor 1 -2.01856
SFTPC surfactant protein C -2.00963
CCS copper chaperone for superoxide dismutase -2.00902
CIAO1 cytosolic iron-sulfur assembly component 1 -2.00701
BCAS4 breast carcinoma amplified sequence 4 -1.99158
MTSS1 metastasis suppressor 1 -1.96088
COASY CoA synthase -1.94524
RAP1GAP RAP1 GTPase activating protein -1.94036
PTP4A3 protein tyrosine phosphatase type IVA, member 3 -1.92417
FAM8A1 family with sequence similarity 8, member A1 -1.91416
HSPD1 heat shock 60kDa protein 1 (chaperonin) -1.91104
KRT8P12 keratin 8 pseudogene 12 -1.90938
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 -1.9008
GTPBP6 GTP binding protein 6 (putative) -1.89711
GADD45GIP1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 -1.89187
GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa -1.88756
GIGYF2 GRB10 interacting GYF protein 2 -1.88635
ANKZF1 ankyrin repeat and zinc finger domain containing 1 -1.88273
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa -1.87812
ACTR1B ARP1 actin-related protein 1 homolog B, centractin beta (yeast) -1.87759
THUMPD2 THUMP domain containing 2 -1.85938
RNF126 ring finger protein 126 -1.85126
PRRG2 proline rich Gla (G-carboxyglutamic acid) 2 -1.84965
RNF114 ring finger protein 114 -1.83967
SHANK2 SH3 and multiple ankyrin repeat domains 2 -1.83954
SF3B5 splicing factor 3b, subunit 5, 10kDa -1.83115
NELFA negative elongation factor complex member A -1.83101
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 -1.82681
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3 -1.79033
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein -1.78816
DOPEY1 dopey family member 1 -1.78719
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa -1.78704
PLGLA plasminogen-like A (pseudogene) -1.78519
GPC4 glypican 4 -1.77487
PTPRG protein tyrosine phosphatase, receptor type, G -1.75677
SDAD1 SDA1 domain containing 1 -1.74785
SLA Src-like-adaptor -1.71905
TP73-AS1 TP73 antisense RNA 1 -1.71753
ADAM22 ADAM metallopeptidase domain 22 -1.71671
ABCA7 ATP-binding cassette, sub-family A (ABC1), member 7 -1.71251
KDM3A lysine (K)-specific demethylase 3A -1.70653
CNKSR1 connector enhancer of kinase suppressor of Ras 1 -1.6982
GPR21 G protein-coupled receptor 21 -1.69201
RUFY3 RUN and FYVE domain containing 3 -1.68922
SH3TC1 SH3 domain and tetratricopeptide repeats 1 -1.67127
AARSD1 alanyl-tRNA synthetase domain containing 1 -1.66254
ZNF324 zinc finger protein 324 -1.65531
SLC16A4 solute carrier family 16, member 4 -1.65303
MTIF2 mitochondrial translational initiation factor 2 -1.64755
KDSR 3-ketodihydrosphingosine reductase -1.63752
UNC45A unc-45 homolog A (C. elegans) -1.62745
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) -1.62697
HPS4 Hermansky-Pudlak syndrome 4 -1.62553
GORASP2 golgi reassembly stacking protein 2, 55kDa -1.62195
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) -1.6194
COLGALT2 collagen beta(1-O)galactosyltransferase 2 -1.61085
GGTLC1 gamma-glutamyltransferase light chain 1 -1.60984
ADCK3 aarF domain containing kinase 3 -1.60851
DHX57 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 -1.6031
COX5B cytochrome c oxidase subunit Vb -1.60081
SLC37A1 solute carrier family 37 (glucose-6-phosphate transporter), member 1 -1.60051
SSR1 signal sequence receptor, alpha -1.60035
ITPK1 inositol-tetrakisphosphate 1-kinase -1.59951
GRIK2 glutamate receptor, ionotropic, kainate 2 -1.59861
METTL8 methyltransferase like 8 -1.59794
PIGF phosphatidylinositol glycan anchor biosynthesis, class F -1.59768
PCGF1 polycomb group ring finger 1 -1.58827
AGTR2 angiotensin II receptor, type 2 -1.58341
SORBS2 sorbin and SH3 domain containing 2 -1.57913
DYM dymeclin -1.57288
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide -1.5697
TSTA3 tissue specific transplantation antigen P35B -1.56144
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -1.55561
PIP prolactin-induced protein -1.5502
APC2 adenomatosis polyposis coli 2 -1.54594
RPL37A ribosomal protein L37a -1.54335
POLRMT polymerase (RNA) mitochondrial (DNA directed) -1.53644
IQSEC1 IQ motif and Sec7 domain 1 -1.53102
PIPOX pipecolic acid oxidase -1.5181
PPP1R9A protein phosphatase 1, regulatory subunit 9A -1.507
AGTPBP1 ATP/GTP binding protein 1 -1.49434
DEPTOR DEP domain containing MTOR-interacting protein -1.49293
FCER1G Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide -1.49095
NOL6 nucleolar protein 6 (RNA-associated) -1.48695
SLC27A5 solute carrier family 27 (fatty acid transporter), member 5 -1.48604
FBXL4 F-box and leucine-rich repeat protein 4 -1.47582
EIF4A2 eukaryotic translation initiation factor 4A2 -1.46937
DCAKD dephospho-CoA kinase domain containing -1.4681
NEK3 NIMA-related kinase 3 -1.4604
PAPOLG poly(A) polymerase gamma -1.45922
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) -1.45861
PTPRD protein tyrosine phosphatase, receptor type, D -1.45758
MATK megakaryocyte-associated tyrosine kinase -1.4574
ATP5D ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit -1.45738
ATG4B autophagy related 4B, cysteine peptidase -1.45695
TRAPPC6A trafficking protein particle complex 6A -1.4517
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 -1.44992
TRIT1 tRNA isopentenyltransferase 1 -1.4493
BTBD2 BTB (POZ) domain containing 2 -1.44916
PDLIM4 PDZ and LIM domain 4 -1.44788
B3GNTL1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 -1.447
RNMT RNA (guanine-7-) methyltransferase -1.44594
LIAS lipoic acid synthetase -1.44316
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -1.44036
EPB41L4B erythrocyte membrane protein band 4.1 like 4B -1.43134
CYP7B1 cytochrome P450, family 7, subfamily B, polypeptide 1 -1.42893
NLGN3 neuroligin 3 -1.42888
STAP2 signal transducing adaptor family member 2 -1.42743
CDRT4 CMT1A duplicated region transcript 4 -1.42405
TMED3 transmembrane emp24 protein transport domain containing 3 -1.41989