TCF12_MCF-7_hg19_1 Gene Set

Dataset ENCODE Transcription Factor Binding Site Profiles
Category genomics
Type transcription factor binding site profile
Description transcription factor binding site profile identified as [transcription factor gene symbol]_[cell type]_[reference genome]_[replicate number] (Encyclopedia of DNA Elements)
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Genes

421 genes with transcription factor binding evidence in the TCF12_MCF-7_hg19_1 transcription factor binding site profile from the ENCODE Transcription Factor Binding Site Profiles dataset.

Symbol Name
ACSS1 acyl-CoA synthetase short-chain family member 1
ADARB1 adenosine deaminase, RNA-specific, B1
ADRM1 adhesion regulating molecule 1
AGR2 anterior gradient 2
AGR3 anterior gradient 3
AGXT alanine-glyoxylate aminotransferase
AHRR aryl-hydrocarbon receptor repressor
AKAP1 A kinase (PRKA) anchor protein 1
AKAP10 A kinase (PRKA) anchor protein 10
ALDH3A2 aldehyde dehydrogenase 3 family, member A2
AMOTL2 angiomotin like 2
ANKIB1 ankyrin repeat and IBR domain containing 1
ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle)
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
ANXA9 annexin A9
APRT adenine phosphoribosyltransferase
ARL4A ADP-ribosylation factor-like 4A
ARL6IP6 ADP-ribosylation factor-like 6 interacting protein 6
ATG14 autophagy related 14
ATG4D autophagy related 4D, cysteine peptidase
AUP1 ancient ubiquitous protein 1
B3GNTL1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
BATF basic leucine zipper transcription factor, ATF-like
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BCL9L B-cell CLL/lymphoma 9-like
BHLHE40 basic helix-loop-helix family, member e40
BRPF1 bromodomain and PHD finger containing, 1
BRWD1 bromodomain and WD repeat domain containing 1
BRWD1-IT2 BRWD1 intronic transcript 2 (non-protein coding)
BTBD19 BTB (POZ) domain containing 19
C10ORF10 chromosome 10 open reading frame 10
C14ORF169 chromosome 14 open reading frame 169
C14ORF80 chromosome 14 open reading frame 80
C1ORF159 chromosome 1 open reading frame 159
C1QTNF6 C1q and tumor necrosis factor related protein 6
C21ORF58 chromosome 21 open reading frame 58
C2ORF54 chromosome 2 open reading frame 54
C5ORF56 chromosome 5 open reading frame 56
C6ORF48 chromosome 6 open reading frame 48
C7ORF49 chromosome 7 open reading frame 49
C9ORF116 chromosome 9 open reading frame 116
C9ORF139 chromosome 9 open reading frame 139
CASKIN2 CASK interacting protein 2
CBX3 chromobox homolog 3
CCDC148 coiled-coil domain containing 148
CCDC159 coiled-coil domain containing 159
CCDC88C coiled-coil domain containing 88C
CCT4 chaperonin containing TCP1, subunit 4 (delta)
CD3EAP CD3e molecule, epsilon associated protein
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group)
CDC42BPG CDC42 binding protein kinase gamma (DMPK-like)
CDS1 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CEP76 centrosomal protein 76kDa
CGN cingulin
CIB3 calcium and integrin binding family member 3
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
CLDN24 claudin 24
CLDN7 claudin 7
CLPSL1 colipase-like 1
CNTD2 cyclin N-terminal domain containing 2
COA1 cytochrome c oxidase assembly factor 1 homolog (S. cerevisiae)
COL12A1 collagen, type XII, alpha 1
COL18A1 collagen, type XVIII, alpha 1
COLEC12 collectin sub-family member 12
CREBZF CREB/ATF bZIP transcription factor
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like
CRNDE colorectal neoplasia differentially expressed (non-protein coding)
CSRP1 cysteine and glycine-rich protein 1
CST6 cystatin E/M
CTBP2 C-terminal binding protein 2
CTDSP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
CTNS cystinosin, lysosomal cystine transporter
CTSA cathepsin A
CUEDC1 CUE domain containing 1
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1
CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43
DALRD3 DALR anticodon binding domain containing 3
DCAF10 DDB1 and CUL4 associated factor 10
DCAF4 DDB1 and CUL4 associated factor 4
DDX31 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31
DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
DDX59 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding)
DMPK dystrophia myotonica-protein kinase
DNAAF5 dynein, axonemal, assembly factor 5
DNAJC5B DnaJ (Hsp40) homolog, subfamily C, member 5 beta
DOK7 docking protein 7
DSCAM-AS1 DSCAM antisense RNA 1
DSCR3 Down syndrome critical region 3
DSP desmoplakin
DSTN destrin (actin depolymerizing factor)
DUSP2 dual specificity phosphatase 2
EFNA1 ephrin-A1
EIF4A2 eukaryotic translation initiation factor 4A2
EIF4E2 eukaryotic translation initiation factor 4E family member 2
EMC6 ER membrane protein complex subunit 6
ENC1 ectodermal-neural cortex 1 (with BTB domain)
ENTPD8 ectonucleoside triphosphate diphosphohydrolase 8
EPCAM epithelial cell adhesion molecule
EPS8 epidermal growth factor receptor pathway substrate 8
ESRP1 epithelial splicing regulatory protein 1
ESRP2 epithelial splicing regulatory protein 2
ESYT3 extended synaptotagmin-like protein 3
EVI2A ecotropic viral integration site 2A
F7 coagulation factor VII (serum prothrombin conversion accelerator)
FADD Fas (TNFRSF6)-associated via death domain
FAF1 Fas (TNFRSF6) associated factor 1
FAM168A family with sequence similarity 168, member A
FAM214A family with sequence similarity 214, member A
FAM3C family with sequence similarity 3, member C
FAM43A family with sequence similarity 43, member A
FAM53C family with sequence similarity 53, member C
FAM84B family with sequence similarity 84, member B
FANCA Fanconi anemia, complementation group A
FBP1 fructose-1,6-bisphosphatase 1
FKBP2 FK506 binding protein 2, 13kDa
FKBP4 FK506 binding protein 4, 59kDa
FMN1 formin 1
FOXA1 forkhead box A1
FOXJ3 forkhead box J3
FOXO3 forkhead box O3
G6PD glucose-6-phosphate dehydrogenase
GARS glycyl-tRNA synthetase
GET4 golgi to ER traffic protein 4 homolog (S. cerevisiae)
GMFB glia maturation factor, beta
GPRC5A G protein-coupled receptor, class C, group 5, member A
GPRC5C G protein-coupled receptor, class C, group 5, member C
GREB1 growth regulation by estrogen in breast cancer 1
GSE1 Gse1 coiled-coil protein
GSTP1 glutathione S-transferase pi 1
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa
GUCA2A guanylate cyclase activator 2A (guanylin)
H3F3A H3 histone, family 3A
H3F3AP4 H3 histone, family 3A, pseudogene 4
H3F3B H3 histone, family 3B (H3.3B)
HDDC3 HD domain containing 3
HEBP2 heme binding protein 2
HES1 hes family bHLH transcription factor 1
HIST1H4D histone cluster 1, H4d
HIST2H2AB histone cluster 2, H2ab
HIST2H2AC histone cluster 2, H2ac
HIST2H2BE histone cluster 2, H2be
HIST4H4 histone cluster 4, H4
HLTF helicase-like transcription factor
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPK heterogeneous nuclear ribonucleoprotein K
HNRNPR heterogeneous nuclear ribonucleoprotein R
HSPB1 heat shock 27kDa protein 1
HTRA2 HtrA serine peptidase 2
HYPK huntingtin interacting protein K
ICT1 immature colon carcinoma transcript 1
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
IER3 immediate early response 3
IER5L immediate early response 5-like
IGSF9 immunoglobulin superfamily, member 9
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL17C interleukin 17C
IL24 interleukin 24
INADL InaD-like (Drosophila)
INF2 inverted formin, FH2 and WH2 domain containing
IRF2BPL interferon regulatory factor 2 binding protein-like
ISG20 interferon stimulated exonuclease gene 20kDa
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
JUNB jun B proto-oncogene
JUP junction plakoglobin
KAZALD1 Kazal-type serine peptidase inhibitor domain 1
KCNG3 potassium channel, voltage gated modifier subfamily G, member 3
KCNK6 potassium channel, two pore domain subfamily K, member 6
KCTD15 potassium channel tetramerization domain containing 15
KEAP1 kelch-like ECH-associated protein 1
KIAA1586 KIAA1586
KIF21A kinesin family member 21A
KLF10 Kruppel-like factor 10
KLK6 kallikrein-related peptidase 6
KMT2A lysine (K)-specific methyltransferase 2A
KMT2E lysine (K)-specific methyltransferase 2E
KRIT1 KRIT1, ankyrin repeat containing
KRT18 keratin 18, type I
KRT19 keratin 19, type I
KRT8 keratin 8, type II
LAD1 ladinin 1
LATS1 large tumor suppressor kinase 1
LEMD3 LEM domain containing 3
LINC00273 long intergenic non-protein coding RNA 273
LINC00482 long intergenic non-protein coding RNA 482
LINC01465 long intergenic non-protein coding RNA 1465
LLGL2 lethal giant larvae homolog 2 (Drosophila)
LNPEP leucyl/cystinyl aminopeptidase
LNX2 ligand of numb-protein X 2
LOC100128398 uncharacterized LOC100128398
LOC100130264 uncharacterized LOC100130264
LOC100130417 uncharacterized LOC100130417
LOC100130880 uncharacterized LOC100130880
LOC100130950 uncharacterized LOC100130950
LOC100287036 uncharacterized LOC100287036
LOC100288748 uncharacterized LOC100288748
LOC113230 uncharacterized protein LOC113230
LOC155060 AI894139 pseudogene
LOC440600 uncharacterized LOC440600
LOC647323 uncharacterized LOC647323
LONRF2 LON peptidase N-terminal domain and ring finger 2
LRP6 low density lipoprotein receptor-related protein 6
LRRC37A3 leucine rich repeat containing 37, member A3
LSM14B LSM14B, SCD6 homolog B (S. cerevisiae)
LY6D lymphocyte antigen 6 complex, locus D
MACC1 metastasis associated in colon cancer 1
MACROD1 MACRO domain containing 1
MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
MAP1S microtubule-associated protein 1S
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
MARCH10 membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase
MAZ MYC-associated zinc finger protein (purine-binding transcription factor)
MB myoglobin
MDM4 MDM4, p53 regulator
MIR141 microRNA 141
MIR191 microRNA 191
MIR200C microRNA 200c
MIR3193 microRNA 3193
MIR3648-1 microRNA 3648-1
MIR3687-1 microRNA 3687-1
MIR375 microRNA 375
MIR425 microRNA 425
MIR4252 microRNA 4252
MIR4429 microRNA 4429
MIR4492 microRNA 4492
MIR4505 microRNA 4505
MIR4648 microRNA 4648
MIR4669 microRNA 4669
MIR4698 microRNA 4698
MIR635 microRNA 635
MIR663A microRNA 663a
MIR99B microRNA 99b
MIRLET7E microRNA let-7e
MIRLET7I microRNA let-7i
MISP mitotic spindle positioning
MLPH melanophilin
MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
MPST mercaptopyruvate sulfurtransferase
MRPL34 mitochondrial ribosomal protein L34
MRPL39 mitochondrial ribosomal protein L39
MRPS2 mitochondrial ribosomal protein S2
MSMB microseminoprotein, beta-
MT1A metallothionein 1A
MTL5 metallothionein-like 5, testis-specific (tesmin)
MYLIP myosin regulatory light chain interacting protein
N4BP3 NEDD4 binding protein 3
NAB2 NGFI-A binding protein 2 (EGR1 binding protein 2)
NADK NAD kinase
NAPA N-ethylmaleimide-sensitive factor attachment protein, alpha
NCBP1 nuclear cap binding protein subunit 1, 80kDa
NCBP2 nuclear cap binding protein subunit 2, 20kDa
NCCRP1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
NDUFAF3 NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding)
NEURL2 neuralized E3 ubiquitin protein ligase 2
NFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
NFE2L2 nuclear factor, erythroid 2-like 2
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NR0B2 nuclear receptor subfamily 0, group B, member 2
NR2F2 nuclear receptor subfamily 2, group F, member 2
NT5DC3 5'-nucleotidase domain containing 3
ORAI3 ORAI calcium release-activated calcium modulator 3
OSGIN2 oxidative stress induced growth inhibitor family member 2
OVOL2 ovo-like zinc finger 2
PA2G4P4 proliferation-associated 2G4 pseudogene 4
PCNT pericentrin
PDE8A phosphodiesterase 8A
PDZK1 PDZ domain containing 1
PHF23 PHD finger protein 23
PIM3 Pim-3 proto-oncogene, serine/threonine kinase
PKM pyruvate kinase, muscle
PKP4 plakophilin 4
PLK2 polo-like kinase 2
PLK3 polo-like kinase 3
PLXNB2 plexin B2
PMEPA1 prostate transmembrane protein, androgen induced 1
PMPCA peptidase (mitochondrial processing) alpha
POLR1D polymerase (RNA) I polypeptide D, 16kDa
PPDPF pancreatic progenitor cell differentiation and proliferation factor
PPM1H protein phosphatase, Mg2+/Mn2+ dependent, 1H
PPP1R13L protein phosphatase 1, regulatory subunit 13 like
PPP6R1 protein phosphatase 6, regulatory subunit 1
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta
PRMT6 protein arginine methyltransferase 6
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
PRR15L proline rich 15-like
PRSS22 protease, serine, 22
PRSS27 protease, serine 27
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
PTK6 protein tyrosine kinase 6
PTMA prothymosin, alpha
RAB26 RAB26, member RAS oncogene family
RANBP2 RAN binding protein 2
RARA retinoic acid receptor, alpha
RASEF RAS and EF-hand domain containing
RBL2 retinoblastoma-like 2
RBM15 RNA binding motif protein 15
RBM47 RNA binding motif protein 47
REPIN1 replication initiator 1
RFESD Rieske (Fe-S) domain containing
RHOD ras homolog family member D
RMI1 RecQ mediated genome instability 1
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase
RNF223 ring finger protein 223
ROPN1B rhophilin associated tail protein 1B
RPL13 ribosomal protein L13
RPL24 ribosomal protein L24
RSBN1 round spermatid basic protein 1
S100A10 S100 calcium binding protein A10
S100A2 S100 calcium binding protein A2
SACK1A scaffolding CK1 anchoring protein A
SAMD8 sterile alpha motif domain containing 8
SCLY selenocysteine lyase
SDCCAG3 serologically defined colon cancer antigen 3
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SENP6 SUMO1/sentrin specific peptidase 6
SERINC4 serine incorporator 4
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
SETX senataxin
SF3A3 splicing factor 3a, subunit 3, 60kDa
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
SHPK sedoheptulokinase
SIGIRR single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
SIGLEC5 sialic acid binding Ig-like lectin 5
SIPA1L3 signal-induced proliferation-associated 1 like 3
SKIL SKI-like proto-oncogene
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2
SLC37A3 solute carrier family 37, member 3
SLC38A2 solute carrier family 38, member 2
SLC44A1 solute carrier family 44 (choline transporter), member 1
SLC45A4 solute carrier family 45, member 4
SLCO4A1 solute carrier organic anion transporter family, member 4A1
SMAD5 SMAD family member 5
SMAD5-AS1 SMAD5 antisense RNA 1
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SMEK1 SMEK homolog 1, suppressor of mek1 (Dictyostelium)
SMIM6 small integral membrane protein 6
SNORA11B small nucleolar RNA, H/ACA box 11B
SNORD2 small nucleolar RNA, C/D box 2
SNORD48 small nucleolar RNA, C/D box 48
SNORD68 small nucleolar RNA, C/D box 68
SOCS2 suppressor of cytokine signaling 2
SP3 Sp3 transcription factor
SPTSSB serine palmitoyltransferase, small subunit B
SRI sorcin
SSBP2 single-stranded DNA binding protein 2
SSH3 slingshot protein phosphatase 3
SSR4P1 signal sequence receptor, delta pseudogene 1
ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2
STAT1 signal transducer and activator of transcription 1, 91kDa
STC2 stanniocalcin 2
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
SULT2B1 sulfotransferase family, cytosolic, 2B, member 1
SYDE2 synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
SYT8 synaptotagmin VIII
TACSTD2 tumor-associated calcium signal transducer 2
TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3
TBL1X transducin (beta)-like 1X-linked
TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3
TCTEX1D4 Tctex1 domain containing 4
TDRD5 tudor domain containing 5
TERC telomerase RNA component
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
TFF1 trefoil factor 1
TFF3 trefoil factor 3 (intestinal)
THBS1 thrombospondin 1
TIGD1 tigger transposable element derived 1
TIGD7 tigger transposable element derived 7
TIPARP TCDD-inducible poly(ADP-ribose) polymerase
TIPARP-AS1 TIPARP antisense RNA 1
TMEM105 transmembrane protein 105
TMEM11 transmembrane protein 11
TMEM184A transmembrane protein 184A
TMEM205 transmembrane protein 205
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast)
TP53INP1 tumor protein p53 inducible nuclear protein 1
TPD52L1 tumor protein D52-like 1
TRAF4 TNF receptor-associated factor 4
TRERF1 transcriptional regulating factor 1
TRIB1 tribbles pseudokinase 1
TRIL TLR4 interactor with leucine-rich repeats
TSEN54 TSEN54 tRNA splicing endonuclease subunit
TSPEAR thrombospondin-type laminin G domain and EAR repeats
TST thiosulfate sulfurtransferase (rhodanese)
TSTD2 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1
UBE2W ubiquitin-conjugating enzyme E2W (putative)
UCKL1 uridine-cytidine kinase 1-like 1
UIMC1 ubiquitin interaction motif containing 1
USP9X ubiquitin specific peptidase 9, X-linked
VASP vasodilator-stimulated phosphoprotein
VIPR1 vasoactive intestinal peptide receptor 1
VSIG10 V-set and immunoglobulin domain containing 10
WBP4 WW domain binding protein 4
WDR74 WD repeat domain 74
WDR87 WD repeat domain 87
WISP2 WNT1 inducible signaling pathway protein 2
WWOX WW domain containing oxidoreductase
XTBD1 XRN2 binding domain containing 1
YTHDF2 YTH N(6)-methyladenosine RNA binding protein 2
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
ZBTB1 zinc finger and BTB domain containing 1
ZBTB2 zinc finger and BTB domain containing 2
ZBTB25 zinc finger and BTB domain containing 25
ZBTB26 zinc finger and BTB domain containing 26
ZBTB42 zinc finger and BTB domain containing 42
ZBTB7A zinc finger and BTB domain containing 7A
ZBTB7B zinc finger and BTB domain containing 7B
ZCCHC3 zinc finger, CCHC domain containing 3
ZCCHC6 zinc finger, CCHC domain containing 6
ZFAND3 zinc finger, AN1-type domain 3
ZFP36L2 ZFP36 ring finger protein-like 2
ZFPM1 zinc finger protein, FOG family member 1
ZMYM2 zinc finger, MYM-type 2
ZNF200 zinc finger protein 200
ZNF280D zinc finger protein 280D
ZNF594 zinc finger protein 594
ZNF606 zinc finger protein 606
ZNF75A zinc finger protein 75a