TE-10 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
Description A immortal human esophagus-derived cell line cell that has the characteristics: Human cell line derived from esophageal cancer. Highly differentiated squamous cell carcinoma. TKG0261(Deposited from Tohoku Univ.). (Cell Line Ontology, CLO_0051372)
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Genes

246 genes with high or low expression in TE-10 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
TBCCD1 TBCC domain containing 1 3.5993
IFT38 intraflagellar transport 38 3.15994
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha 3.10811
RPL39L ribosomal protein L39-like 2.77688
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 2.60526
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 2.58552
ADH7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide 2.55963
RFC4 replication factor C (activator 1) 4, 37kDa 2.53768
ATXN3 ataxin 3 2.46951
LGALS7 lectin, galactoside-binding, soluble, 7 2.46172
RBX1 ring-box 1, E3 ubiquitin protein ligase 2.39264
MCCC1 methylcrotonoyl-CoA carboxylase 1 (alpha) 2.35704
ATP11B ATPase, class VI, type 11B 2.34346
ANKRD26 ankyrin repeat domain 26 2.33437
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 2.32762
VTI1B vesicle transport through interaction with t-SNAREs 1B 2.30717
SAGE1 sarcoma antigen 1 2.28584
METAP1 methionyl aminopeptidase 1 2.1995
PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 2.12248
PGRMC1 progesterone receptor membrane component 1 2.11533
DRG2 developmentally regulated GTP binding protein 2 2.09278
PRPF18 pre-mRNA processing factor 18 2.05676
CDCA4 cell division cycle associated 4 2.02514
AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 1.98676
DST dystonin 1.98497
OSGEP O-sialoglycoprotein endopeptidase 1.978
PARD3 par-3 family cell polarity regulator 1.96153
ABI1 abl-interactor 1 1.96087
BCAT1 branched chain amino-acid transaminase 1, cytosolic 1.95693
PAX9 paired box 9 1.95323
DBR1 debranching RNA lariats 1 1.95211
ACTL6A actin-like 6A 1.92501
TAS2R7 taste receptor, type 2, member 7 1.92264
SYCP2 synaptonemal complex protein 2 1.92087
SHMT1 serine hydroxymethyltransferase 1 (soluble) 1.90965
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 1.90581
AP4S1 adaptor-related protein complex 4, sigma 1 subunit 1.89356
MNAT1 MNAT CDK-activating kinase assembly factor 1 1.88733
WDR44 WD repeat domain 44 1.88359
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 1.8558
GMPR2 guanosine monophosphate reductase 2 1.85419
JADE2 jade family PHD finger 2 1.83017
COQ2 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase 1.82855
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 1.80319
PARP2 poly (ADP-ribose) polymerase 2 1.80238
RANGAP1 Ran GTPase activating protein 1 1.7821
KIF5B kinesin family member 5B 1.77323
UBE2L3 ubiquitin-conjugating enzyme E2L 3 1.77144
ATXN10 ataxin 10 1.76776
CLDN10 claudin 10 1.75683
TOM1L2 target of myb1-like 2 (chicken) 1.75177
YY1 YY1 transcription factor 1.74173
TRIP11 thyroid hormone receptor interactor 11 1.7314
MTMR12 myotubularin related protein 12 1.72588
ACTR6 ARP6 actin-related protein 6 homolog (yeast) 1.72199
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13 1.71773
HSPA4L heat shock 70kDa protein 4-like 1.71199
ATPAF2 ATP synthase mitochondrial F1 complex assembly factor 2 1.69273
AP2M1 adaptor-related protein complex 2, mu 1 subunit 1.69044
MAGEA11 melanoma antigen family A11 1.6898
RPP38 ribonuclease P/MRP 38kDa subunit 1.68952
ANAPC10 anaphase promoting complex subunit 10 1.67643
BST1 bone marrow stromal cell antigen 1 1.65915
BHMT betaine--homocysteine S-methyltransferase 1.65311
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa 1.65144
SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 1.64426
METTL3 methyltransferase like 3 1.63961
HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6 1.63658
BCL2L2 BCL2-like 2 1.61273
NTRK2 neurotrophic tyrosine kinase, receptor, type 2 1.61163
GSTZ1 glutathione S-transferase zeta 1 1.60447
TMEM14A transmembrane protein 14A 1.59836
CENPE centromere protein E, 312kDa 1.59136
RASSF9 Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 1.58459
BRD1 bromodomain containing 1 1.58456
PADI3 peptidyl arginine deiminase, type III 1.57797
METTL7A methyltransferase like 7A 1.57763
PMFBP1 polyamine modulated factor 1 binding protein 1 1.57733
UPK1B uroplakin 1B 1.57099
ZFYVE21 zinc finger, FYVE domain containing 21 1.57061
SOX2 SRY (sex determining region Y)-box 2 1.56769
S1PR5 sphingosine-1-phosphate receptor 5 1.56558
FN3KRP fructosamine 3 kinase related protein 1.55436
FXR1 fragile X mental retardation, autosomal homolog 1 1.54643
RNF7 ring finger protein 7 1.54212
HSPA14 heat shock 70kDa protein 14 1.54152
NEDD8 neural precursor cell expressed, developmentally down-regulated 8 1.54087
DSG3 desmoglein 3 1.53865
MFN1 mitofusin 1 1.53446
LRAT lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) 1.52662
CUL2 cullin 2 1.52312
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 1.52272
ALDH7A1 aldehyde dehydrogenase 7 family, member A1 1.52181
RXFP3 relaxin/insulin-like family peptide receptor 3 1.5164
SPAST spastin 1.51353
EXD2 exonuclease 3'-5' domain containing 2 1.50905
CHD8 chromodomain helicase DNA binding protein 8 1.50886
NKRF NFKB repressing factor 1.50613
CNTN1 contactin 1 1.50026
SMAD1 SMAD family member 1 1.49569
SMC6 structural maintenance of chromosomes 6 1.4915
PRSS21 protease, serine, 21 (testisin) 1.49091
VSNL1 visinin-like 1 1.48644
STRN3 striatin, calmodulin binding protein 3 1.47971
ECT2 epithelial cell transforming 2 1.47897
NIPBL Nipped-B homolog (Drosophila) 1.47844
KRT6B keratin 6B, type II 1.47634
BAG4 BCL2-associated athanogene 4 1.47527
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 1.4694
POLR2G polymerase (RNA) II (DNA directed) polypeptide G 1.46866
MAGEA1 melanoma antigen family A1 1.46804
PLS3 plastin 3 1.46446
SULF1 sulfatase 1 1.45276
TK1 thymidine kinase 1, soluble 1.45243
GSTA1 glutathione S-transferase alpha 1 1.44983
PARL presenilin associated, rhomboid-like 1.44567
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa 1.44544
MARK3 MAP/microtubule affinity-regulating kinase 3 1.44367
SPO11 SPO11 meiotic protein covalently bound to DSB 1.43432
GPHN gephyrin 1.43135
RBM23 RNA binding motif protein 23 1.42976
ALDH1L1 aldehyde dehydrogenase 1 family, member L1 1.42924
RCOR1 REST corepressor 1 1.42458
CXCL6 chemokine (C-X-C motif) ligand 6 1.41801

low expression

Symbol Name Standardized Value
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4 -2.95336
CDK13 cyclin-dependent kinase 13 -2.75485
RGS14 regulator of G-protein signaling 14 -2.71723
KIAA1024 KIAA1024 -2.49137
RNMTL1 RNA methyltransferase like 1 -2.48885
TSEN2 TSEN2 tRNA splicing endonuclease subunit -2.43613
UBE2G2 ubiquitin-conjugating enzyme E2G 2 -2.42126
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 -2.39971
ICAM4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) -2.3778
SIGLEC15 sialic acid binding Ig-like lectin 15 -2.37502
GDAP2 ganglioside induced differentiation associated protein 2 -2.33077
RASGRF1 Ras protein-specific guanine nucleotide-releasing factor 1 -2.32616
IGHD immunoglobulin heavy constant delta -2.27353
INTS7 integrator complex subunit 7 -2.16427
UCP3 uncoupling protein 3 (mitochondrial, proton carrier) -2.15715
IFT54 intraflagellar transport 54 -2.15079
XYLB xylulokinase homolog (H. influenzae) -2.14232
ZDHHC11 zinc finger, DHHC-type containing 11 -2.13811
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) -2.13456
ZNF701 zinc finger protein 701 -2.12987
PARP3 poly (ADP-ribose) polymerase family, member 3 -2.10645
PCF11 PCF11 cleavage and polyadenylation factor subunit -2.08665
NBEAL2 neurobeachin-like 2 -2.06622
P2RX5 purinergic receptor P2X, ligand gated ion channel, 5 -2.05709
SEC16A SEC16 homolog A (S. cerevisiae) -1.98526
KCNAB2 potassium channel, voltage gated subfamily A regulatory beta subunit 2 -1.96991
SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa -1.9597
VNN1 vanin 1 -1.92843
GLYAT glycine-N-acyltransferase -1.87396
ATP10A ATPase, class V, type 10A -1.87258
OR2B2 olfactory receptor, family 2, subfamily B, member 2 -1.86941
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -1.86808
CNOT3 CCR4-NOT transcription complex, subunit 3 -1.86099
TNMD tenomodulin -1.84189
KBTBD11 kelch repeat and BTB (POZ) domain containing 11 -1.83076
ANKRD36B ankyrin repeat domain 36B -1.82854
CFAP44 cilia and flagella associated protein 44 -1.82506
TLL2 tolloid-like 2 -1.80956
ARSB arylsulfatase B -1.80302
PTGER3 prostaglandin E receptor 3 (subtype EP3) -1.79716
TWF2 twinfilin actin binding protein 2 -1.77484
NHLH2 nescient helix loop helix 2 -1.76885
ELN elastin -1.76803
TTTY15 testis-specific transcript, Y-linked 15 (non-protein coding) -1.76739
SMG5 SMG5 nonsense mediated mRNA decay factor -1.74977
CDON cell adhesion associated, oncogene regulated -1.74565
OR1D2 olfactory receptor, family 1, subfamily D, member 2 -1.73616
TSC1 tuberous sclerosis 1 -1.73126
LPIN2 lipin 2 -1.72926
IQCH IQ motif containing H -1.72825
RNF167 ring finger protein 167 -1.72258
MDM4 MDM4, p53 regulator -1.70549
RNF144A ring finger protein 144A -1.68931
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) -1.68622
PHYHIP phytanoyl-CoA 2-hydroxylase interacting protein -1.68316
TMPRSS6 transmembrane protease, serine 6 -1.66224
ARID5A AT rich interactive domain 5A (MRF1-like) -1.65281
HEATR1 HEAT repeat containing 1 -1.64
LEF1 lymphoid enhancer-binding factor 1 -1.63926
KIR2DS3 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 3 -1.63922
RCL1 RNA terminal phosphate cyclase-like 1 -1.63408
COL11A2 collagen, type XI, alpha 2 -1.62539
LMBR1L limb development membrane protein 1-like -1.62293
CD1E CD1e molecule -1.62287
KIAA0513 KIAA0513 -1.62203
C2CD2L C2CD2-like -1.61509
STAT5A signal transducer and activator of transcription 5A -1.61093
GPC5 glypican 5 -1.60817
ANGEL2 angel homolog 2 (Drosophila) -1.6073
PIGA phosphatidylinositol glycan anchor biosynthesis, class A -1.60447
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase -1.60267
CYBB cytochrome b-245, beta polypeptide -1.60261
EPN1 epsin 1 -1.60177
AVL9 AVL9 homolog (S. cerevisiase) -1.59572
NOSIP nitric oxide synthase interacting protein -1.59571
TNFRSF9 tumor necrosis factor receptor superfamily, member 9 -1.58983
MED24 mediator complex subunit 24 -1.58893
PCDHGA10 protocadherin gamma subfamily A, 10 -1.5817
CTNS cystinosin, lysosomal cystine transporter -1.57575
CAPN10 calpain 10 -1.57307
GPR135 G protein-coupled receptor 135 -1.57201
RCOR3 REST corepressor 3 -1.55751
SLC16A6 solute carrier family 16, member 6 -1.55623
ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 -1.5553
SLC35C1 solute carrier family 35 (GDP-fucose transporter), member C1 -1.5551
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1 -1.54982
PPP2R1A protein phosphatase 2, regulatory subunit A, alpha -1.54633
TESC tescalcin -1.54352
USP36 ubiquitin specific peptidase 36 -1.54003
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4 -1.538
AZI2 5-azacytidine induced 2 -1.53478
MED22 mediator complex subunit 22 -1.5281
PWWP2A PWWP domain containing 2A -1.51994
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -1.51659
RASIP1 Ras interacting protein 1 -1.51501
ADAP2 ArfGAP with dual PH domains 2 -1.51118
ATAD3A ATPase family, AAA domain containing 3A -1.50199
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) -1.50039
PDE4DIP phosphodiesterase 4D interacting protein -1.49962
TRIM36 tripartite motif containing 36 -1.4936
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) -1.4852
AP4E1 adaptor-related protein complex 4, epsilon 1 subunit -1.48243
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa -1.47228
GP6 glycoprotein VI (platelet) -1.47217
PLCD1 phospholipase C, delta 1 -1.46996
PCBP4 poly(rC) binding protein 4 -1.46986
SKAP1 src kinase associated phosphoprotein 1 -1.46543
MTMR6 myotubularin related protein 6 -1.46356
CIZ1 CDKN1A interacting zinc finger protein 1 -1.46294
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae) -1.45922
ATHL1 ATH1, acid trehalase-like 1 (yeast) -1.45342
FOXD2 forkhead box D2 -1.4454
XPA xeroderma pigmentosum, complementation group A -1.43937
RAG1 recombination activating gene 1 -1.43735
RASA3 RAS p21 protein activator 3 -1.43362
SHBG sex hormone-binding globulin -1.42405
BUD31 BUD31 homolog (S. cerevisiae) -1.42218
ZER1 zyg-11 related, cell cycle regulator -1.42124
ISCA1 iron-sulfur cluster assembly 1 -1.41901
USP29 ubiquitin specific peptidase 29 -1.41881
NPR2 natriuretic peptide receptor 2 -1.41801
TMED5 transmembrane emp24 protein transport domain containing 5 -1.41646