TE-15 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description Human esophageal squamous cell carcinoma cell line. (BRENDA Tissue and Enzyme Source Ontology, BTO_0004598)
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Genes

238 genes with high or low copy number in TE-15 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
MIR4715 microRNA 4715 4.51153
ATP10A ATPase, class V, type 10A 4.51153
LINC00929 long intergenic non-protein coding RNA 929 4.51153
LOC100128714 uncharacterized LOC100128714 4.51153
ISX intestine-specific homeobox 2.93899
LOC642426 uncharacterized LOC642426 2.76305
OR11H12 olfactory receptor, family 11, subfamily H, member 12 2.76305
C11ORF30 chromosome 11 open reading frame 30 2.59653
LOC283214 uncharacterized LOC283214 2.59653
DGAT2 diacylglycerol O-acyltransferase 2 2.59653
WNT11 wingless-type MMTV integration site family, member 11 2.59653
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) 2.49065
KLHL35 kelch-like family member 35 2.49065
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1 2.49065
PAAF1 proteasomal ATPase-associated factor 1 2.49065
SNORD15B small nucleolar RNA, C/D box 15B 2.49065
COA4 cytochrome c oxidase assembly factor 4 homolog (S. cerevisiae) 2.49065
MOGAT2 monoacylglycerol O-acyltransferase 2 2.49065
B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 2.49065
PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) 2.49065
MRPL48 mitochondrial ribosomal protein L48 2.49065
LRRC32 leucine rich repeat containing 32 2.49065
OMP olfactory marker protein 2.49065
MAP6 microtubule-associated protein 6 2.49065
SNORD15A small nucleolar RNA, C/D box 15A 2.49065
RPS3 ribosomal protein S3 2.49065
ACER3 alkaline ceramidase 3 2.49065
UVRAG UV radiation resistance associated 2.49065
RAB6A RAB6A, member RAS oncogene family 2.49065
CAPN5 calpain 5 2.49065
MYO7A myosin VIIA 2.44392
PPME1 protein phosphatase methylesterase 1 2.44392
FAM168A family with sequence similarity 168, member A 2.44392
TPBGL trophoblast glycoprotein-like 2.44392
DNAJB13 DnaJ (Hsp40) homolog, subfamily B, member 13 2.44392
NEU3 sialidase 3 (membrane sialidase) 2.44392
UCP3 uncoupling protein 3 (mitochondrial, proton carrier) 2.44392
TSKU tsukushi, small leucine rich proteoglycan 2.44392
UCP2 uncoupling protein 2 (mitochondrial, proton carrier) 2.44392
ARRB1 arrestin, beta 1 2.44392
RELT RELT tumor necrosis factor receptor 2.44392
GUCY2EP guanylate cyclase 2E, pseudogene 2.44392
MIR326 microRNA 326 2.44392
GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 2.44392
P4HA3 prolyl 4-hydroxylase, alpha polypeptide III 2.41451
SLCO2B1 solute carrier organic anion transporter family, member 2B1 2.41451
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17 2.41451
P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6 2.41451
OR2AT4 olfactory receptor, family 2, subfamily AT, member 4 2.41451
P2RY2 purinergic receptor P2Y, G-protein coupled, 2 2.41451
PGM2L1 phosphoglucomutase 2-like 1 2.39327
TENM4 teneurin transmembrane protein 4 2.39327
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae) 2.39327
FCHSD2 FCH and double SH3 domains 2 2.39327
XRRA1 X-ray radiation resistance associated 1 2.39327
GDPD4 glycerophosphodiester phosphodiesterase domain containing 4 2.39327
DEFB108B defensin, beta 108B 2.36889
KCTD21 potassium channel tetramerization domain containing 21 2.36889
USP35 ubiquitin specific peptidase 35 2.36889
ALG8 ALG8, alpha-1,3-glucosyltransferase 2.36889
NDUFC2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 2.36889
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2.36889
FAM86C1 family with sequence similarity 86, member C1 2.36889
THRSP thyroid hormone responsive 2.36889
ALG1L9P asparagine-linked glycosylation 1-like 9, pseudogene 2.36889
KCTD14 potassium channel tetramerization domain containing 14 2.36889
NDUFC2-KCTD14 NDUFC2-KCTD14 readthrough 2.36889
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative) 2.36889
RSF1 remodeling and spacing factor 1 2.35236
ANAPC15 anaphase promoting complex subunit 15 2.35236
LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 2.35236
AQP11 aquaporin 11 2.35236
AAMDC adipogenesis associated, Mth938 domain containing 2.35236
POLD3 polymerase (DNA-directed), delta 3, accessory subunit 2.35236
GAB2 GRB2-associated binding protein 2 2.35236
KCNE3 potassium channel, voltage gated subfamily E regulatory beta subunit 3 2.35236
CLNS1A chloride channel, nucleotide-sensitive, 1A 2.35236
LIPT2 lipoyl(octanoyl) transferase 2 (putative) 2.35236
LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2.3178
NUMA1 nuclear mitotic apparatus protein 1 2.3178
IL18BP interleukin 18 binding protein 2.3178
RNF121 ring finger protein 121 2.3178
MIR3165 microRNA 3165 2.3178
LOC100133315 transient receptor potential cation channel, subfamily C, member 2-like 2.3178
LOC100129216 beta-defensin 131-like 2.3178
SGCE sarcoglycan, epsilon 2.26395
KRTAP5-7 keratin associated protein 5-7 2.26395
KRTAP5-8 keratin associated protein 5-8 2.26395
KRTAP5-9 keratin associated protein 5-9 2.26395
CASD1 CAS1 domain containing 1 2.26395
PEG10 paternally expressed 10 2.26395
KRTAP5-11 keratin associated protein 5-11 2.26395
NADSYN1 NAD synthetase 1 2.25904
KRTAP5-10 keratin associated protein 5-10 2.25904
DHCR7 7-dehydrocholesterol reductase 2.24845
FLJ42102 uncharacterized LOC399923 2.24845
MIR3664 microRNA 3664 2.22291
SHANK2-AS3 SHANK2 antisense RNA 3 2.22291
FASTKD3 FAST kinase domains 3 2.20309
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2.20309
MIR4636 microRNA 4636 2.20053
MIR4458 microRNA 4458 2.20053
LOC729506 uncharacterized LOC729506 2.20053
RPL37 ribosomal protein L37 2.19863
CARD6 caspase recruitment domain family, member 6 2.19863
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit 2.19863
LOC100506548 uncharacterized LOC100506548 2.19863
SNORD123 small nucleolar RNA, C/D box 123 2.19863
TAS2R1 taste receptor, type 2, member 1 2.19863
TTC33 tetratricopeptide repeat domain 33 2.19863
SNORD72 small nucleolar RNA, C/D box 72 2.19863
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 2.19863
PTGER4 prostaglandin E receptor 4 (subtype EP4) 2.19301
MROH2B maestro heat-like repeat family member 2B 2.19301
C7 complement component 7 2.19301
LOC401177 uncharacterized LOC401177 2.19301
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3 2.19301
EGFLAM-AS4 EGFLAM antisense RNA 4 2.18778
EGFLAM-AS2 EGFLAM antisense RNA 2 2.18778
C6 complement component 6 2.18778
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 2.18778
EGFLAM EGF-like, fibronectin type III and laminin G domains 2.18778
FYB FYN binding protein 2.18778
RICTOR RPTOR independent companion of MTOR, complex 2 2.18778
C9 complement component 9 2.18778
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 2.18778
IL7R interleukin 7 receptor 2.18778
MIR3650 microRNA 3650 2.18778
LIFR leukemia inhibitory factor receptor alpha 2.18778
DNAH5 dynein, axonemal, heavy chain 5 2.18778
SPEF2 sperm flagellar 2 2.18778
LOC153684 uncharacterized LOC153684 2.18124
OXCT1 3-oxoacid CoA transferase 1 2.18124
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 2.18124
FBXO4 F-box protein 4 2.18124
LOC648987 uncharacterized LOC648987 2.18124
GHR growth hormone receptor 2.18124
ANXA2R annexin A2 receptor 2.18124
LOC100506639 uncharacterized LOC100506639 2.18124
LOC100132356 uncharacterized LOC100132356 2.18124
C5ORF51 chromosome 5 open reading frame 51 2.18124
OSMR oncostatin M receptor 2.18124
TRIO trio Rho guanine nucleotide exchange factor 2.18124
CCL28 chemokine (C-C motif) ligand 28 2.18124
ZBTB35 zinc finger and BTB domain containing 35 2.18124
CAPSL calcyphosine-like 2.18124
MRPS30 mitochondrial ribosomal protein S30 2.17694
C5ORF28 chromosome 5 open reading frame 28 2.17694
RANBP3L RAN binding protein 3-like 2.17694
SEPP1 selenoprotein P, plasma, 1 2.17694
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1 2.17694
MIR580 microRNA 580 2.17694
C5ORF34 chromosome 5 open reading frame 34 2.17694
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 2.17694
LMBRD2 LMBR1 domain containing 2 2.17694
UGT3A2 UDP glycosyltransferase 3 family, polypeptide A2 2.17694
CCDC152 coiled-coil domain containing 152 2.17694
PAIP1 poly(A) binding protein interacting protein 1 2.17694
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 2.16947
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 2.16947
PRLR prolactin receptor 2.16947
RAI14 retinoic acid induced 14 2.16947
AGXT2 alanine--glyoxylate aminotransferase 2 2.16947
RAD1 RAD1 checkpoint DNA exonuclease 2.16947
TTC23L tetratricopeptide repeat domain 23-like 2.16947
BRIX1 BRX1, biogenesis of ribosomes 2.16947
FGF10 fibroblast growth factor 10 2.16947
NNT nicotinamide nucleotide transhydrogenase 2.16816
MIR548K microRNA 548k 2.16564
FADD Fas (TNFRSF6)-associated via death domain 2.16564
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 2.16459
ANO1 anoctamin 1, calcium activated chloride channel 2.16307
FGF3 fibroblast growth factor 3 2.16307
CTTN cortactin 2.16307
LOC340107 uncharacterized LOC340107 2.16307
FGF4 fibroblast growth factor 4 2.16176
FGF19 fibroblast growth factor 19 2.1605
CCND1 cyclin D1 2.1605
ORAOV1 oral cancer overexpressed 1 2.16017
LARGE like-glycosyltransferase 2.14116
POTEG POTE ankyrin domain family, member G 2.10992
POTEM POTE ankyrin domain family, member M 2.10038
CHEK2P2 checkpoint kinase 2 pseudogene 2 2.09896
HERC2P3 hect domain and RLD 2 pseudogene 3 2.09534
HERC2P7 hect domain and RLD 2 pseudogene 7 2.09363
GOLGA6L6 golgin A6 family-like 6 2.09363
GOLGA8CP golgin A8 family, member C, pseudogene 2.09363
OR11H2 olfactory receptor, family 11, subfamily H, member 2 2.09073
REREP3 arginine-glutamic acid dipeptide (RE) repeats pseudogene 3 2.08872
C2CD3 C2 calcium-dependent domain containing 3 2.08712
MIR5579 microRNA 5579 2.08334
MIR708 microRNA 708 2.08334
POTEB POTE ankyrin domain family, member B 2.08279
NBEAP1 neurobeachin pseudogene 1 2.08279
NF1P2 neurofibromin 1 pseudogene 2 2.08279
LOC727924 uncharacterized LOC727924 2.08134
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene 2.08116
OR4N4 olfactory receptor, family 4, subfamily N, member 4 2.08108
OR4N3P olfactory receptor, family 4, subfamily N, member 3 pseudogene 2.08099
OR4M2 olfactory receptor, family 4, subfamily M, member 2 2.08099
CXADRP2 coxsackie virus and adenovirus receptor pseudogene 2 2.08021
RNF169 ring finger protein 169 2.08021
MIR4696 microRNA 4696 2.08021
CHRDL2 chordin-like 2 2.08021
OR4M1 olfactory receptor, family 4, subfamily M, member 1 2.06989
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3 2.06989
OR4K1 olfactory receptor, family 4, subfamily K, member 1 2.06626
OR4K5 olfactory receptor, family 4, subfamily K, member 5 2.06626
OR4N2 olfactory receptor, family 4, subfamily N, member 2 2.06626
OR4K2 olfactory receptor, family 4, subfamily K, member 2 2.06626
INTS4 integrator complex subunit 4 2.06537
SHANK2-AS1 SHANK2 antisense RNA 1 2.05422
LOC285692 uncharacterized LOC285692 2.0522
CTNND2 catenin (cadherin-associated protein), delta 2 2.05129
LSP1P3 lymphocyte-specific protein 1 pseudogene 3 2.05072
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 2.05045
PRDM9 PR domain containing 9 2.05041
CDH10 cadherin 10, type 2 (T2-cadherin) 2.05014
SHANK2 SH3 and multiple ankyrin repeat domains 2 2.04969
PMCHL1 pro-melanin-concentrating hormone-like 1, pseudogene 2.04969
CDH9 cadherin 9, type 2 (T1-cadherin) 2.04969
GUSBP1 glucuronidase, beta pseudogene 1 2.0489
CDH18 cadherin 18, type 2 2.0489
CDH12 cadherin 12, type 2 (N-cadherin 2) 2.0489
IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) 2.04842
IGHE immunoglobulin heavy constant epsilon 2.04816
IGHD immunoglobulin heavy constant delta 2.04803
ADAM6 ADAM metallopeptidase domain 6 (pseudogene) 2.04767
KIAA0125 KIAA0125 2.04731
LINC00226 long intergenic non-protein coding RNA 226 2.04712

low copy number

Symbol Name Standardized Value
HPS1 Hermansky-Pudlak syndrome 1 -5.12655
ZNF750 zinc finger protein 750 -3.2703
FAM171B family with sequence similarity 171, member B -3.15836
BAZ2B bromodomain adjacent to zinc finger domain, 2B -3.11641
ITGAV integrin, alpha V -3.0433
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28 -3.04299
ZNF705B zinc finger protein 705B -2.79933
LOC284344 uncharacterized LOC284344 -2.74526