| Dataset | GDSC Cell Line Gene Expression Profiles |
| Category | transcriptomics |
| Type | cell line |
| Description | A immortal human esophagus-derived cell line cell that has the characteristics: Human esophageal squamous cell carcinoma (poorly differentiated) cell line. Not transplantable to nude mouse. TKG0260 (Deposited from Tohoku Univ.). (Cell Line Ontology, CLO_0051379) |
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271 genes with high or low expression in TE-9 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| MTHFD1 | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase | 2.72615 |
| SLC52A1 | solute carrier family 52 (riboflavin transporter), member 1 | 2.55252 |
| GMPR2 | guanosine monophosphate reductase 2 | 2.4599 |
| ATF7IP2 | activating transcription factor 7 interacting protein 2 | 2.4167 |
| KRT4 | keratin 4, type II | 2.39772 |
| FADD | Fas (TNFRSF6)-associated via death domain | 2.38913 |
| AFG3L2 | AFG3-like AAA ATPase 2 | 2.38505 |
| TLR5 | toll-like receptor 5 | 2.34066 |
| RNASEH2A | ribonuclease H2, subunit A | 2.31899 |
| TTC23 | tetratricopeptide repeat domain 23 | 2.31653 |
| GEMIN4 | gem (nuclear organelle) associated protein 4 | 2.31104 |
| OXA1L | oxidase (cytochrome c) assembly 1-like | 2.28888 |
| THADA | thyroid adenoma associated | 2.24053 |
| CHD8 | chromodomain helicase DNA binding protein 8 | 2.21133 |
| TNK1 | tyrosine kinase, non-receptor, 1 | 2.15957 |
| APEX1 | APEX nuclease (multifunctional DNA repair enzyme) 1 | 2.12905 |
| CNOT1 | CCR4-NOT transcription complex, subunit 1 | 2.10228 |
| ABCC5 | ATP-binding cassette, sub-family C (CFTR/MRP), member 5 | 2.09124 |
| OR2H1 | olfactory receptor, family 2, subfamily H, member 1 | 2.08079 |
| PARP2 | poly (ADP-ribose) polymerase 2 | 2.02763 |
| ALPPL2 | alkaline phosphatase, placental-like 2 | 2.01885 |
| PLD2 | phospholipase D2 | 2.0093 |
| DAO | D-amino-acid oxidase | 1.96616 |
| PADI3 | peptidyl arginine deiminase, type III | 1.94257 |
| LY6D | lymphocyte antigen 6 complex, locus D | 1.9325 |
| UBAC1 | UBA domain containing 1 | 1.93224 |
| XRCC6 | X-ray repair complementing defective repair in Chinese hamster cells 6 | 1.90257 |
| B3GNT4 | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 | 1.88194 |
| NDUFA8 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa | 1.88141 |
| SCGB1A1 | secretoglobin, family 1A, member 1 (uteroglobin) | 1.87337 |
| GABRP | gamma-aminobutyric acid (GABA) A receptor, pi | 1.85779 |
| KLF15 | Kruppel-like factor 15 | 1.85546 |
| ALDH3A1 | aldehyde dehydrogenase 3 family, member A1 | 1.85276 |
| NDUFV1 | NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa | 1.8376 |
| CCNB1IP1 | cyclin B1 interacting protein 1, E3 ubiquitin protein ligase | 1.83723 |
| RPUSD2 | RNA pseudouridylate synthase domain containing 2 | 1.81024 |
| RPL3L | ribosomal protein L3-like | 1.80168 |
| SAGE1 | sarcoma antigen 1 | 1.79957 |
| EIF3D | eukaryotic translation initiation factor 3, subunit D | 1.79142 |
| ADAMTS12 | ADAM metallopeptidase with thrombospondin type 1 motif, 12 | 1.79011 |
| MSLN | mesothelin | 1.78783 |
| NPC2 | Niemann-Pick disease, type C2 | 1.7834 |
| TP53TG1 | TP53 target 1 (non-protein coding) | 1.7724 |
| CROCC | ciliary rootlet coiled-coil, rootletin | 1.77105 |
| ASB4 | ankyrin repeat and SOCS box containing 4 | 1.74689 |
| SLC39A2 | solute carrier family 39 (zinc transporter), member 2 | 1.73967 |
| DUOX1 | dual oxidase 1 | 1.73956 |
| MUC4 | mucin 4, cell surface associated | 1.73838 |
| RBM23 | RNA binding motif protein 23 | 1.73498 |
| EPB42 | erythrocyte membrane protein band 4.2 | 1.73473 |
| COQ9 | coenzyme Q9 | 1.72572 |
| KLK13 | kallikrein-related peptidase 13 | 1.72232 |
| TNFSF10 | tumor necrosis factor (ligand) superfamily, member 10 | 1.71635 |
| KRT13 | keratin 13, type I | 1.68649 |
| RNF122 | ring finger protein 122 | 1.68627 |
| CLPB | ClpB homolog, mitochondrial AAA ATPase chaperonin | 1.68618 |
| INVS | inversin | 1.66072 |
| GABRA1 | gamma-aminobutyric acid (GABA) A receptor, alpha 1 | 1.65576 |
| PRSS21 | protease, serine, 21 (testisin) | 1.65508 |
| ETFB | electron-transfer-flavoprotein, beta polypeptide | 1.65456 |
| FZD10 | frizzled class receptor 10 | 1.63981 |
| FOSB | FBJ murine osteosarcoma viral oncogene homolog B | 1.63838 |
| COX4I1 | cytochrome c oxidase subunit IV isoform 1 | 1.636 |
| TOP2A | topoisomerase (DNA) II alpha 170kDa | 1.62249 |
| MPPED2 | metallophosphoesterase domain containing 2 | 1.61685 |
| CAMSAP2 | calmodulin regulated spectrin-associated protein family, member 2 | 1.60869 |
| ABCD4 | ATP-binding cassette, sub-family D (ALD), member 4 | 1.60852 |
| CHRNG | cholinergic receptor, nicotinic, gamma (muscle) | 1.59949 |
| PLA2G2E | phospholipase A2, group IIE | 1.59942 |
| GPKOW | G patch domain and KOW motifs | 1.59685 |
| RPL35 | ribosomal protein L35 | 1.58457 |
| PPP1R12B | protein phosphatase 1, regulatory subunit 12B | 1.58258 |
| ARHGEF4 | Rho guanine nucleotide exchange factor (GEF) 4 | 1.58175 |
| VRK1 | vaccinia related kinase 1 | 1.58157 |
| XRCC3 | X-ray repair complementing defective repair in Chinese hamster cells 3 | 1.58076 |
| UGT2A1 | UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus | 1.57571 |
| SLC25A31 | solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 | 1.57246 |
| CHAF1A | chromatin assembly factor 1, subunit A (p150) | 1.56727 |
| SERPINI2 | serpin peptidase inhibitor, clade I (pancpin), member 2 | 1.56172 |
| PPFIA1 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 | 1.55892 |
| BIK | BCL2-interacting killer (apoptosis-inducing) | 1.55861 |
| CELA3B | chymotrypsin-like elastase family, member 3B | 1.55798 |
| GSTP1 | glutathione S-transferase pi 1 | 1.55481 |
| MASP1 | mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) | 1.5543 |
| MMP13 | matrix metallopeptidase 13 | 1.54968 |
| THTPA | thiamine triphosphatase | 1.5494 |
| KLK11 | kallikrein-related peptidase 11 | 1.54297 |
| ATP6V1B1 | ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 | 1.54153 |
| NDUFS8 | NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) | 1.53757 |
| B3GALT4 | UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 | 1.53652 |
| ACACA | acetyl-CoA carboxylase alpha | 1.5313 |
| DOC2A | double C2-like domains, alpha | 1.52752 |
| DLK2 | delta-like 2 homolog (Drosophila) | 1.52711 |
| PALM | paralemmin | 1.52639 |
| ATP8B3 | ATPase, aminophospholipid transporter, class I, type 8B, member 3 | 1.5198 |
| HCG26 | HLA complex group 26 (non-protein coding) | 1.51915 |
| CYP2U1 | cytochrome P450, family 2, subfamily U, polypeptide 1 | 1.51631 |
| SUSD4 | sushi domain containing 4 | 1.51434 |
| ALPL | alkaline phosphatase, liver/bone/kidney | 1.51225 |
| FAT2 | FAT atypical cadherin 2 | 1.50643 |
| KCNC4 | potassium channel, voltage gated Shaw related subfamily C, member 4 | 1.50598 |
| KRT5 | keratin 5, type II | 1.4996 |
| RNPEP | arginyl aminopeptidase (aminopeptidase B) | 1.49534 |
| GALR3 | galanin receptor 3 | 1.48768 |
| OLFML2A | olfactomedin-like 2A | 1.48471 |
| CALB1 | calbindin 1, 28kDa | 1.48423 |
| TBC1D22A | TBC1 domain family, member 22A | 1.48306 |
| NR4A1 | nuclear receptor subfamily 4, group A, member 1 | 1.47724 |
| AQP3 | aquaporin 3 (Gill blood group) | 1.47712 |
| CDK18 | cyclin-dependent kinase 18 | 1.47021 |
| FLOT2 | flotillin 2 | 1.46805 |
| PSMG2 | proteasome (prosome, macropain) assembly chaperone 2 | 1.46775 |
| ALG12 | ALG12, alpha-1,6-mannosyltransferase | 1.46615 |
| IER2 | immediate early response 2 | 1.46484 |
| CEL | carboxyl ester lipase | 1.46344 |
| OPRM1 | opioid receptor, mu 1 | 1.45066 |
| AHSA1 | AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) | 1.44792 |
| ZFR2 | zinc finger RNA binding protein 2 | 1.4477 |
| CTTN | cortactin | 1.44666 |
| PCDHA5 | protocadherin alpha 5 | 1.44361 |
| HOXD12 | homeobox D12 | 1.4397 |
| CDH5 | cadherin 5, type 2 (vascular endothelium) | 1.43621 |
| KLK8 | kallikrein-related peptidase 8 | 1.43202 |
| RIBC2 | RIB43A domain with coiled-coils 2 | 1.43137 |
| DTL | denticleless E3 ubiquitin protein ligase homolog (Drosophila) | 1.42786 |
| HSD17B3 | hydroxysteroid (17-beta) dehydrogenase 3 | 1.42748 |
| TRAP1 | TNF receptor-associated protein 1 | 1.42732 |
| RAD51 | RAD51 recombinase | 1.42614 |
| SSH3 | slingshot protein phosphatase 3 | 1.42595 |
| DNAJC4 | DnaJ (Hsp40) homolog, subfamily C, member 4 | 1.42569 |
| PRC1 | protein regulator of cytokinesis 1 | 1.42244 |
| EGFL6 | EGF-like-domain, multiple 6 | 1.42197 |
| RPP25 | ribonuclease P/MRP 25kDa subunit | 1.41836 |
| Symbol | Name | Standardized Value |
|---|---|---|
| SEC22B | SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) | -3.21807 |
| SNRNP27 | small nuclear ribonucleoprotein 27kDa (U4/U6.U5) | -3.14916 |
| SEC24A | SEC24 family member A | -2.81187 |
| SCN11A | sodium channel, voltage gated, type XI alpha subunit | -2.78217 |
| NFYA | nuclear transcription factor Y, alpha | -2.7445 |
| ATF6B | activating transcription factor 6 beta | -2.65773 |
| TRIM23 | tripartite motif containing 23 | -2.61834 |
| GDAP2 | ganglioside induced differentiation associated protein 2 | -2.59168 |
| SEC61G | Sec61 gamma subunit | -2.53765 |
| YAF2 | YY1 associated factor 2 | -2.50144 |
| USP15 | ubiquitin specific peptidase 15 | -2.48041 |
| KIF2A | kinesin heavy chain member 2A | -2.4167 |
| STAM | signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 | -2.41004 |
| HUS1 | HUS1 checkpoint homolog (S. pombe) | -2.35917 |
| NFKBIB | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta | -2.32332 |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 | -2.29015 |
| RNF25 | ring finger protein 25 | -2.26799 |
| ARID3A | AT rich interactive domain 3A (BRIGHT-like) | -2.26211 |
| UBE2K | ubiquitin-conjugating enzyme E2K | -2.21264 |
| CHUK | conserved helix-loop-helix ubiquitous kinase | -2.20982 |
| SLC16A6 | solute carrier family 16, member 6 | -2.17618 |
| ANAPC10 | anaphase promoting complex subunit 10 | -2.15162 |
| SIRT1 | sirtuin 1 | -2.14172 |
| USF2 | upstream transcription factor 2, c-fos interacting | -2.11664 |
| BMI1 | BMI1 proto-oncogene, polycomb ring finger | -2.10199 |
| EIF1AY | eukaryotic translation initiation factor 1A, Y-linked | -2.08859 |
| RAB5A | RAB5A, member RAS oncogene family | -2.05814 |
| SLC3A1 | solute carrier family 3 (amino acid transporter heavy chain), member 1 | -2.05341 |
| HEXA | hexosaminidase A (alpha polypeptide) | -2.0482 |
| CHST5 | carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 | -2.03385 |
| SATL1 | spermidine/spermine N1-acetyl transferase-like 1 | -2.033 |
| SNAPC2 | small nuclear RNA activating complex, polypeptide 2, 45kDa | -2.02963 |
| DCAF13 | DDB1 and CUL4 associated factor 13 | -2.02808 |
| ZNF468 | zinc finger protein 468 | -2.02215 |
| HIPK1 | homeodomain interacting protein kinase 1 | -2.00562 |
| IMPA1 | inositol(myo)-1(or 4)-monophosphatase 1 | -1.99181 |
| N6AMT1 | N-6 adenine-specific DNA methyltransferase 1 (putative) | -1.98368 |
| TCEB1 | transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) | -1.97625 |
| IFT81 | intraflagellar transport 81 | -1.97585 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 | -1.96689 |
| SSR3 | signal sequence receptor, gamma (translocon-associated protein gamma) | -1.95561 |
| VN1R1 | vomeronasal 1 receptor 1 | -1.94617 |
| NOL6 | nucleolar protein 6 (RNA-associated) | -1.9389 |
| ERBB2IP | erbb2 interacting protein | -1.9318 |
| NAPA | N-ethylmaleimide-sensitive factor attachment protein, alpha | -1.92801 |
| COX11 | COX11 cytochrome c oxidase copper chaperone | -1.92294 |
| AGFG1 | ArfGAP with FG repeats 1 | -1.9169 |
| WDR48 | WD repeat domain 48 | -1.91338 |
| CRYBB2 | crystallin, beta B2 | -1.90161 |
| NIPA2 | non imprinted in Prader-Willi/Angelman syndrome 2 | -1.89397 |
| ZNF292 | zinc finger protein 292 | -1.8914 |
| CALU | calumenin | -1.86317 |
| ZFP37 | ZFP37 zinc finger protein | -1.85912 |
| UFM1 | ubiquitin-fold modifier 1 | -1.83829 |
| BRAF | B-Raf proto-oncogene, serine/threonine kinase | -1.83602 |
| UBE2NL | ubiquitin-conjugating enzyme E2N-like (gene/pseudogene) | -1.81897 |
| GAB2 | GRB2-associated binding protein 2 | -1.80865 |
| ZNF143 | zinc finger protein 143 | -1.80737 |
| ZNF573 | zinc finger protein 573 | -1.80188 |
| RNF5 | ring finger protein 5, E3 ubiquitin protein ligase | -1.78996 |
| TMEM33 | transmembrane protein 33 | -1.78901 |
| PRPF18 | pre-mRNA processing factor 18 | -1.78824 |
| MED8 | mediator complex subunit 8 | -1.78717 |
| LINS | lines homolog (Drosophila) | -1.78169 |
| PTN | pleiotrophin | -1.78049 |
| ZNF430 | zinc finger protein 430 | -1.77481 |
| CCDC90B | coiled-coil domain containing 90B | -1.77207 |
| LOC155060 | AI894139 pseudogene | -1.77044 |
| SLC25A51 | solute carrier family 25, member 51 | -1.75251 |
| CHRNA9 | cholinergic receptor, nicotinic, alpha 9 (neuronal) | -1.73887 |
| CCT6A | chaperonin containing TCP1, subunit 6A (zeta 1) | -1.72743 |
| KIAA1033 | KIAA1033 | -1.72631 |
| PCNP | PEST proteolytic signal containing nuclear protein | -1.72539 |
| VCP | valosin containing protein | -1.72266 |
| FANCF | Fanconi anemia, complementation group F | -1.71689 |
| LAMTOR5 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | -1.6815 |
| SOS2 | son of sevenless homolog 2 (Drosophila) | -1.68074 |
| VEZF1 | vascular endothelial zinc finger 1 | -1.6666 |
| SMAD2 | SMAD family member 2 | -1.66534 |
| RNF115 | ring finger protein 115 | -1.6637 |
| ATP6V0B | ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b | -1.65709 |
| PPP5C | protein phosphatase 5, catalytic subunit | -1.65439 |
| ZNF202 | zinc finger protein 202 | -1.64604 |
| SON | SON DNA binding protein | -1.64339 |
| TLR4 | toll-like receptor 4 | -1.64186 |
| DISC1 | disrupted in schizophrenia 1 | -1.63826 |
| NRAS | neuroblastoma RAS viral (v-ras) oncogene homolog | -1.63645 |
| CAPZA2 | capping protein (actin filament) muscle Z-line, alpha 2 | -1.6322 |
| DHX29 | DEAH (Asp-Glu-Ala-His) box polypeptide 29 | -1.63185 |
| CASD1 | CAS1 domain containing 1 | -1.62756 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 | -1.6234 |
| ZNF432 | zinc finger protein 432 | -1.62202 |
| KCTD5 | potassium channel tetramerization domain containing 5 | -1.61912 |
| MEF2D | myocyte enhancer factor 2D | -1.61153 |
| PITRM1 | pitrilysin metallopeptidase 1 | -1.61101 |
| SMG5 | SMG5 nonsense mediated mRNA decay factor | -1.60675 |
| RAB28 | RAB28, member RAS oncogene family | -1.60541 |
| COLGALT2 | collagen beta(1-O)galactosyltransferase 2 | -1.60415 |
| ZFP30 | ZFP30 zinc finger protein | -1.60213 |
| SETD4 | SET domain containing 4 | -1.60105 |
| VLDLR | very low density lipoprotein receptor | -1.5956 |
| TMEM104 | transmembrane protein 104 | -1.59126 |
| KIN | Kin17 DNA and RNA binding protein | -1.58982 |
| UBA2 | ubiquitin-like modifier activating enzyme 2 | -1.58745 |
| HSPA13 | heat shock protein 70kDa family, member 13 | -1.58586 |
| RCHY1 | ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase | -1.58396 |
| IGFBP4 | insulin-like growth factor binding protein 4 | -1.57249 |
| ZMYM5 | zinc finger, MYM-type 5 | -1.56921 |
| DNAJB6 | DnaJ (Hsp40) homolog, subfamily B, member 6 | -1.56357 |
| CHMP5 | charged multivesicular body protein 5 | -1.55915 |
| ZNF207 | zinc finger protein 207 | -1.54278 |
| ZNF443 | zinc finger protein 443 | -1.54005 |
| PPID | peptidylprolyl isomerase D | -1.53516 |
| ARF4 | ADP-ribosylation factor 4 | -1.53181 |
| RAPGEF2 | Rap guanine nucleotide exchange factor (GEF) 2 | -1.53138 |
| GPATCH3 | G patch domain containing 3 | -1.53098 |
| GNAI3 | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 | -1.52891 |
| FBXO22 | F-box protein 22 | -1.52518 |
| BCAS2 | breast carcinoma amplified sequence 2 | -1.52112 |
| ZNF8 | zinc finger protein 8 | -1.51859 |
| DYRK1A | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A | -1.50748 |
| RIF1 | replication timing regulatory factor 1 | -1.50459 |
| PRKRIR | protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) | -1.50358 |
| CD79B | CD79b molecule, immunoglobulin-associated beta | -1.4991 |
| POMT2 | protein-O-mannosyltransferase 2 | -1.49635 |
| NUPL1 | nucleoporin like 1 | -1.48683 |
| MTMR6 | myotubularin related protein 6 | -1.47642 |
| B3GNT2 | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 | -1.47586 |
| ZNF20 | zinc finger protein 20 | -1.46813 |
| SIKE1 | suppressor of IKBKE 1 | -1.46362 |
| EIF4G2 | eukaryotic translation initiation factor 4 gamma, 2 | -1.4516 |
| NDUFS4 | NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) | -1.45097 |
| CDH11 | cadherin 11, type 2, OB-cadherin (osteoblast) | -1.4405 |
| SEC14L1 | SEC14-like 1 (S. cerevisiae) | -1.42838 |
| UBE2J1 | ubiquitin-conjugating enzyme E2, J1 | -1.42296 |
| SKIV2L2 | superkiller viralicidic activity 2-like 2 (S. cerevisiae) | -1.42216 |
| SEC23IP | SEC23 interacting protein | -1.42022 |
| RAB6A | RAB6A, member RAS oncogene family | -1.41707 |
