TE125T Gene Set

Dataset CCLE Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: rhabdomyosarcoma (Cell Line Ontology, CLO_0009289)
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Genes

42 genes with high or low copy number in TE125T relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
SPATA31C1 SPATA31 subfamily C, member 1 1.56225

low copy number

Symbol Name Standardized Value
CGNL1 cingulin-like 1 -3.21049
GALM galactose mutarotase (aldose 1-epimerase) -3.21021
FGF10 fibroblast growth factor 10 -3.08021
LINC00707 long intergenic non-protein coding RNA 707 -3.06697
LOC221122 uncharacterized LOC221122 -2.8156
LINC00910 long intergenic non-protein coding RNA 910 -2.72355
WDR17 WD repeat domain 17 -2.58492
SEZ6L seizure related 6 homolog (mouse)-like -2.3514
RYR2 ryanodine receptor 2 (cardiac) -2.3386
CACNB2 calcium channel, voltage-dependent, beta 2 subunit -2.26264
TAS2R19 taste receptor, type 2, member 19 -2.25591
OR1C1 olfactory receptor, family 1, subfamily C, member 1 -2.25137
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -2.24537
CFHR1 complement factor H-related 1 -2.18192
KRT85 keratin 85, type II -2.0704
LYG2 lysozyme G-like 2 -2.0572
ZNF804B zinc finger protein 804B -2.04193
C7ORF50 chromosome 7 open reading frame 50 -1.9683
MTUS2 microtubule associated tumor suppressor candidate 2 -1.96806
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2 -1.93562
FMN1 formin 1 -1.92896
ASB2 ankyrin repeat and SOCS box containing 2 -1.865
GRIP1 glutamate receptor interacting protein 1 -1.86406
NBR2 neighbor of BRCA1 gene 2 (non-protein coding) -1.83661
ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 -1.80208
TRIML1 tripartite motif family-like 1 -1.79639
TXLNB taxilin beta -1.7853
L3MBTL4 l(3)mbt-like 4 (Drosophila) -1.72245
NLGN1 neuroligin 1 -1.69893
SLC39A11 solute carrier family 39, member 11 -1.68591
RAD51B RAD51 paralog B -1.65421
MOB2 MOB kinase activator 2 -1.64543
GSG1L GSG1-like -1.64063
OVOL1 ovo-like zinc finger 1 -1.57683
BRD9 bromodomain containing 9 -1.5632
CD300C CD300c molecule -1.51203
OPCML opioid binding protein/cell adhesion molecule-like -1.5096
BRCA1 breast cancer 1, early onset -1.50316
ZNF630 zinc finger protein 630 -1.46406
SSX6 synovial sarcoma, X breakpoint 6 (pseudogene) -1.46403
KIR2DS4 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4 -1.41872