TE8 Gene Set

Dataset DepMap CRISPR Gene Dependency
Category disease or phenotype associations
Type cell line
Description Esophageal Squamous Cell Carcinoma cell line (Cancer Dependency Map)
External Link https://depmap.org/portal/cell_line/ACH-000452
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Genes

216 gene knockdowns changing fitness of TE8 relative to other cell lines from the DepMap CRISPR Gene Dependency Dataset.

Symbol Name Standardized Value
LRRC6 leucine rich repeat containing 6 10.9857
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 8.17203
SMAD3 SMAD family member 3 7.24003
FOSB FBJ murine osteosarcoma viral oncogene homolog B 7.13657
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 7.00153
C11ORF24 chromosome 11 open reading frame 24 6.29307
LIFR leukemia inhibitory factor receptor alpha 5.20048
ITGA6 integrin, alpha 6 5.00099
PTK6 protein tyrosine kinase 6 4.84544
TGFBR1 transforming growth factor, beta receptor 1 4.70473
ZBTB1 zinc finger and BTB domain containing 1 4.61364
CASZ1 castor zinc finger 1 4.50538
HDLBP high density lipoprotein binding protein 4.21916
JKAMP JNK1/MAPK8-associated membrane protein 4.19037
LAT2 linker for activation of T cells family, member 2 4.18152
KTN1 kinectin 1 (kinesin receptor) 4.18134
PCIF1 PDX1 C-terminal inhibiting factor 1 4.17917
NEK9 NIMA-related kinase 9 4.13039
GEN1 GEN1 Holliday junction 5' flap endonuclease 3.98779
DVL2 dishevelled segment polarity protein 2 3.7297
PHF2 PHD finger protein 2 3.72305
SLCO3A1 solute carrier organic anion transporter family, member 3A1 3.70374
JARID2 jumonji, AT rich interactive domain 2 3.64287
GMFB glia maturation factor, beta 3.62798
PEX11A peroxisomal biogenesis factor 11 alpha 3.59381
VEGFA vascular endothelial growth factor A 3.5472
PROL1 proline rich, lacrimal 1 3.52951
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 3.46029
ZNF547 zinc finger protein 547 3.45085
SSR4 signal sequence receptor, delta 3.41224
OGFR opioid growth factor receptor 3.38963
RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1 3.35678
ARHGAP5 Rho GTPase activating protein 5 3.31946
ING2 inhibitor of growth family, member 2 3.28792
GAB1 GRB2-associated binding protein 1 3.2605
RTL1 retrotransposon-like 1 3.21342
ZNF512B zinc finger protein 512B 3.14981
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1 3.14614
SSR1 signal sequence receptor, alpha 3.1307
SOST sclerostin 3.1302
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific) 3.12057
JAK1 Janus kinase 1 3.11511
PLEKHO1 pleckstrin homology domain containing, family O member 1 3.06852
DBF4B DBF4 zinc finger B 3.05237
FAM161A family with sequence similarity 161, member A 3.04335
MAPK14 mitogen-activated protein kinase 14 3.03919
RXRA retinoid X receptor, alpha 2.98626
ZC3HC1 zinc finger, C3HC-type containing 1 2.97986
TMEM276 transmembrane protein 276 2.97904
LKAAEAR1 LKAAEAR motif containing 1 2.93138
MIDEAS mitotic deacetylase associated SANT domain protein 2.92509
AKIP1 A kinase (PRKA) interacting protein 1 2.92479
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase 2.91184
CEP57L1 centrosomal protein 57kDa-like 1 2.89056
SLC10A7 solute carrier family 10, member 7 2.88296
SIRT1 sirtuin 1 2.87907
CCDC37 coiled-coil domain containing 37 2.87035
H1-1 H1.1 linker histone, cluster member 2.81242
KLHL20 kelch-like family member 20 2.80684
DCAF15 DDB1 and CUL4 associated factor 15 2.80032
SPINK5 serine peptidase inhibitor, Kazal type 5 2.78526
WNT5B wingless-type MMTV integration site family, member 5B 2.7823
ARID4B AT rich interactive domain 4B (RBP1-like) 2.75425
CARD19 caspase recruitment domain family member 19 2.75217
SERP1 stress-associated endoplasmic reticulum protein 1 2.7363
SOS1 son of sevenless homolog 1 (Drosophila) 2.72646
CCDC51 coiled-coil domain containing 51 2.72459
MIB1 mindbomb E3 ubiquitin protein ligase 1 2.72113
ATOH8 atonal homolog 8 (Drosophila) 2.71547
ITGB4 integrin, beta 4 2.71512
TMX1 thioredoxin-related transmembrane protein 1 2.70741
C21ORF62 chromosome 21 open reading frame 62 2.70491
HSPA13 heat shock protein 70kDa family, member 13 2.69883
HIST4H4 histone cluster 4, H4 2.69049
GHR growth hormone receptor 2.685
MASP2 mannan-binding lectin serine peptidase 2 2.6801
TDP2 tyrosyl-DNA phosphodiesterase 2 2.67901
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 2.66978
RAPGEFL1 Rap guanine nucleotide exchange factor (GEF)-like 1 2.66756
SLC1A6 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 2.66244
OR4C15 olfactory receptor, family 4, subfamily C, member 15 2.65558
ZNF564 zinc finger protein 564 2.64344
BIRC2 baculoviral IAP repeat containing 2 2.6426
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2.62793
GBP2 guanylate binding protein 2, interferon-inducible 2.62256
PPDPF pancreatic progenitor cell differentiation and proliferation factor 2.6198
CADM2 cell adhesion molecule 2 2.61725
BECN1 beclin 1, autophagy related 2.61255
ATOX1 antioxidant 1 copper chaperone 2.60892
ATL1 atlastin GTPase 1 2.60687
RHBDD2 rhomboid domain containing 2 2.5946
CASR calcium-sensing receptor 2.59189
ZC3H6 zinc finger CCCH-type containing 6 2.57455
GSAP gamma-secretase activating protein 2.56853
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 2.5512
ANXA8L1 annexin A8-like 1 2.54411
TUBA1A tubulin, alpha 1a 2.53821
EED embryonic ectoderm development 2.51394
JUNB jun B proto-oncogene 2.50924
MGA MGA, MAX dimerization protein 2.50786
C16ORF46 chromosome 16 open reading frame 46 2.47908
UCKL1 uridine-cytidine kinase 1-like 1 2.47023
LEAP2 liver expressed antimicrobial peptide 2 2.46664
ATP8B2 ATPase, aminophospholipid transporter, class I, type 8B, member 2 2.46127
TMEM165 transmembrane protein 165 2.46059
RBM33 RNA binding motif protein 33 2.46021
ZNF583 zinc finger protein 583 2.45108
EXT2 exostosin glycosyltransferase 2 2.44986
DDHD1 DDHD domain containing 1 2.44786
OR10A2 olfactory receptor, family 10, subfamily A, member 2 2.44232
IFNE interferon, epsilon 2.43946
VPS26A vacuolar protein sorting 26 homolog A (S. pombe) 2.42625
C9ORF3 chromosome 9 open reading frame 3 2.4233
RARG retinoic acid receptor, gamma 2.42232
POC1A POC1 centriolar protein A 2.41595
C20ORF195 chromosome 20 open reading frame 195 2.41359
TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 2.40395
NDUFA4L2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2 2.3982
ISYNA1 inositol-3-phosphate synthase 1 2.39101
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 2.38235
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 2.38191
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 2.38154
FAM217B family with sequence similarity 217, member B 2.37157
OR10V1 olfactory receptor, family 10, subfamily V, member 1 2.36744
CSF1 colony stimulating factor 1 (macrophage) 2.36599
PTPDC1 protein tyrosine phosphatase domain containing 1 2.36126
EXOC4 exocyst complex component 4 2.3524
DEFB131 defensin, beta 131 2.35193
UVRAG UV radiation resistance associated 2.35191
FSHR follicle stimulating hormone receptor 2.34365
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 2.34108
ANKRD52 ankyrin repeat domain 52 2.33985
NPBWR2 neuropeptides B/W receptor 2 2.33954
CDH4 cadherin 4, type 1, R-cadherin (retinal) 2.33768
SAMD10 sterile alpha motif domain containing 10 2.32584
CYTH3 cytohesin 3 2.32518
TTYH3 tweety family member 3 2.31204
PCGF1 polycomb group ring finger 1 2.31156
EXTL3 exostosin-like glycosyltransferase 3 2.30752
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) 2.3065
DCANP1 dendritic cell-associated nuclear protein 2.30534
EGFR epidermal growth factor receptor 2.30344
PHF14 PHD finger protein 14 2.30081
AKNA AT-hook transcription factor 2.30055
MATN4 matrilin 4 2.2957
OR5D18 olfactory receptor, family 5, subfamily D, member 18 2.2944
HDAC8 histone deacetylase 8 2.2798
TPRA1 transmembrane protein, adipocyte asscociated 1 2.2767
LMOD1 leiomodin 1 (smooth muscle) 2.27523
C16ORF90 chromosome 16 open reading frame 90 2.27352
SNCG synuclein, gamma (breast cancer-specific protein 1) 2.26764
LGALS3 lectin, galactoside-binding, soluble, 3 2.25857
RABEP2 rabaptin, RAB GTPase binding effector protein 2 2.23548
LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2 2.23254
HIST1H3E histone cluster 1, H3e 2.23247
ACADSB acyl-CoA dehydrogenase, short/branched chain 2.20636
CCDC176 coiled-coil domain containing 176 2.20331
IFITM1 interferon induced transmembrane protein 1 2.19747
CXXC5 CXXC finger protein 5 2.19606
CYFIP1 cytoplasmic FMR1 interacting protein 1 2.19587
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) 2.19251
STT3A STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 2.18844
PITRM1 pitrilysin metallopeptidase 1 2.18115
GMEB2 glucocorticoid modulatory element binding protein 2 2.18082
CBX1 chromobox homolog 1 2.17467
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 2.17317
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase 2.16451
SPNS1 spinster homolog 1 (Drosophila) 2.16306
HES4 hes family bHLH transcription factor 4 2.16091
GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2.15119
OR51A2 olfactory receptor, family 51, subfamily A, member 2 2.15062
IL1B interleukin 1, beta 2.15043
TTLL5 tubulin tyrosine ligase-like family member 5 2.1495
ACER1 alkaline ceramidase 1 2.14808
TMEM38A transmembrane protein 38A 2.14015
ZBTB25 zinc finger and BTB domain containing 25 2.13229
NTSR1 neurotensin receptor 1 (high affinity) 2.13038
ITGA10 integrin, alpha 10 2.12578
TNRC6B trinucleotide repeat containing 6B 2.12087
PHF13 PHD finger protein 13 2.11441
RNF103 ring finger protein 103 2.11217
OR10H3 olfactory receptor, family 10, subfamily H, member 3 2.11143
UGT2B17 UDP glucuronosyltransferase 2 family, polypeptide B17 2.103
RRAS related RAS viral (r-ras) oncogene homolog 2.10134
SMAD7 SMAD family member 7 2.09593
NBEAL1 neurobeachin-like 1 2.09564
LYPD3 LY6/PLAUR domain containing 3 2.09344
SSR2 signal sequence receptor, beta (translocon-associated protein beta) 2.09196
TEX43 testis expressed 43 2.08412
KRTCAP2 keratinocyte associated protein 2 2.08234
PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha 2.08083
MLIP muscular LMNA-interacting protein 2.07371
OR13A1 olfactory receptor, family 13, subfamily A, member 1 2.07186
TSC22D1 TSC22 domain family, member 1 2.06773
COL20A1 collagen, type XX, alpha 1 2.0677
ZFYVE27 zinc finger, FYVE domain containing 27 2.06629
ASCL5 achaete-scute family bHLH transcription factor 5 2.05655
BIRC7 baculoviral IAP repeat containing 7 2.05654
SP3 Sp3 transcription factor 2.0522
MTMR3 myotubularin related protein 3 2.05114
CDC50A cell division cycle 50 P4-ATPase accessory subunit A 2.05076
RBM45 RNA binding motif protein 45 2.04939
LAP3 leucine aminopeptidase 3 2.04492
USP44 ubiquitin specific peptidase 44 2.04283
ZCCHC14 zinc finger, CCHC domain containing 14 2.04187
OTUD4 OTU deubiquitinase 4 2.04185
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 2.04097
FAM114A2 family with sequence similarity 114, member A2 2.03721
TCFL5 transcription factor-like 5 (basic helix-loop-helix) 2.03318
BMP1 bone morphogenetic protein 1 2.03033
OR2H2 olfactory receptor, family 2, subfamily H, member 2 2.01957
UROC1 urocanate hydratase 1 2.01849
OR6C68 olfactory receptor, family 6, subfamily C, member 68 2.01435
LIX1L Lix1 homolog (chicken) like 2.00362
CENPJ centromere protein J 2.00157
KIAA0586 KIAA0586 2.00034