THP-1 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

90 genes with high or low copy number in THP-1 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
PPIH peptidylprolyl isomerase H (cyclophilin H) 2.93899
CCDC30 coiled-coil domain containing 30 2.93899
FOXJ3 forkhead box J3 2.93899
MPL MPL proto-oncogene, thrombopoietin receptor 2.93899
ZMYND12 zinc finger, MYND-type containing 12 2.93899
TIE1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 2.93899
PPCS phosphopantothenoylcysteine synthetase 2.93899
SZT2 seizure threshold 2 homolog (mouse) 2.93899
GUCA2A guanylate cyclase activator 2A (guanylin) 2.93899
GUCA2B guanylate cyclase activator 2B (uroguanylin) 2.93899
CDC20 cell division cycle 20 2.93899
MED8 mediator complex subunit 8 2.93899
EBNA1BP2 EBNA1 binding protein 2 2.93899
KDM4A-AS1 KDM4A antisense RNA 1 2.93899
ELOVL1 ELOVL fatty acid elongase 1 2.93899
RIMKLA ribosomal modification protein rimK-like family member A 2.93899
SLC2A1-AS1 SLC2A1 antisense RNA 1 2.93899
YBX1 Y box binding protein 1 2.93899
ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 2.93899
KDM4A lysine (K)-specific demethylase 4A 2.93899
PTPRF protein tyrosine phosphatase, receptor type, F 2.93899
HYI hydroxypyruvate isomerase (putative) 2.93899
FAM183A family with sequence similarity 183, member A 2.93899
ZNF691 zinc finger protein 691 2.76305
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 2.76305
P3H1 prolyl 3-hydroxylase 1 2.76305
C1ORF50 chromosome 1 open reading frame 50 2.76305
ERMAP erythroblast membrane-associated protein (Scianna blood group) 2.76305
CCDC23 coiled-coil domain containing 23 2.76305
CLDN19 claudin 19 2.76305
LOC100129924 uncharacterized LOC100129924 2.76305
EDN2 endothelin 2 2.64759
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2.64759
MIR30C1 microRNA 30c-1 2.44392
MIR30E microRNA 30e 2.44392
KCNQ4 potassium channel, voltage gated KQT-like subfamily Q, member 4 2.39327
SLFNL1-AS1 SLFNL1 antisense RNA 1 2.39327
CTPS1 CTP synthase 1 2.39327
CITED4 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 2.39327
SCMH1 sex comb on midleg homolog 1 (Drosophila) 2.39327
NFYC nuclear transcription factor Y, gamma 2.39327
RIMS3 regulating synaptic membrane exocytosis 3 2.39327
SLFNL1 schlafen-like 1 2.39327
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) 2.35236
ZNF684 zinc finger protein 684 2.35236
SNORA55 small nucleolar RNA, H/ACA box 55 2.35236
PPIEL peptidylprolyl isomerase E-like pseudogene 2.35236
ZFP69 ZFP69 zinc finger protein 2.35236
EXO5 exonuclease 5 2.35236
ZFP69B ZFP69 zinc finger protein B 2.35236
COL9A2 collagen, type IX, alpha 2 2.3178
HEYL hes-related family bHLH transcription factor with YRPW motif-like 2.3178
SMAP2 small ArfGAP2 2.3178
PPT1 palmitoyl-protein thioesterase 1 2.30944
BMP8A bone morphogenetic protein 8a 2.30944
NT5C1A 5'-nucleotidase, cytosolic IA 2.30944
ZMPSTE24 zinc metallopeptidase STE24 2.30944
TMCO2 transmembrane and coiled-coil domains 2 2.30944
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 2.283
RLF rearranged L-myc fusion 2.283
HPCAL4 hippocalcin like 4 2.283
MFSD2A major facilitator superfamily domain containing 2A 2.25904
OXCT2 3-oxoacid CoA transferase 2 2.24845
BMP8B bone morphogenetic protein 8b 2.24845
PPIE peptidylprolyl isomerase E (cyclophilin E) 2.24845
TRIT1 tRNA isopentenyltransferase 1 2.24139

low copy number

Symbol Name Standardized Value
PPP1R2P9 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 9 -3.486
TKTL1 transketolase-like 1 -3.12964
EMD emerin -3.12964
FLNA filamin A, alpha -3.12964
FAM90A2P family with sequence similarity 90, member A2 pseudogene -3.03592
FAM66D family with sequence similarity 66, member D -3.03592
NDP Norrie disease (pseudoglioma) -2.88947
FUNDC1 FUN14 domain containing 1 -2.87802
EFHC2 EF-hand domain (C-terminal) containing 2 -2.87269
MAOA monoamine oxidase A -2.87269
USP17L2 ubiquitin specific peptidase 17-like family member 2 -2.86624
MAOB monoamine oxidase B -2.86559
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -2.86003
USP17L7 ubiquitin specific peptidase 17-like family member 7 -2.86003
DUSP21 dual specificity phosphatase 21 -2.85574
KDM6A lysine (K)-specific demethylase 6A -2.84592
IFNA5 interferon, alpha 5 -2.74973
KLHL9 kelch-like family member 9 -2.74526
IFNA6 interferon, alpha 6 -2.74032
IFNA13 interferon, alpha 13 -2.73798
IFNA2 interferon, alpha 2 -2.73608
IFNA8 interferon, alpha 8 -2.73024
IFNA1 interferon, alpha 1 -2.72828
IFNE interferon, epsilon -2.72466