TO175T Gene Set

Dataset CCLE Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: lymphoma; Hodgkins disease (lymph node primary) (Cell Line Ontology, CLO_0009380)
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Genes

29 genes with high or low copy number in TO175T relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
DUT deoxyuridine triphosphatase 1.65571
AIG1 androgen-induced 1 1.55481
FAM157A family with sequence similarity 157, member A 1.47778

low copy number

Symbol Name Standardized Value
SLC22A24 solute carrier family 22, member 24 -3.21049
VSTM2B V-set and transmembrane domain containing 2B -3.21049
VPS13B vacuolar protein sorting 13 homolog B (yeast) -2.59335
AGMO alkylglycerol monooxygenase -2.14186
GRM8 glutamate receptor, metabotropic 8 -2.03747
UNC5D unc-5 homolog D (C. elegans) -2.01007
MRPS21 mitochondrial ribosomal protein S21 -1.92447
LY6D lymphocyte antigen 6 complex, locus D -1.89429
LYNX1 Ly6/neurotoxin 1 -1.89412
SLC22A23 solute carrier family 22, member 23 -1.88848
TMEM261 transmembrane protein 261 -1.87154
DCLK2 doublecortin-like kinase 2 -1.83619
CEP72 centrosomal protein 72kDa -1.75283
ARL17B ADP-ribosylation factor-like 17B -1.64196
NLGN4X neuroligin 4, X-linked -1.64101
PCSK6 proprotein convertase subtilisin/kexin type 6 -1.62903
CELA3A chymotrypsin-like elastase family, member 3A -1.60544
BRD9 bromodomain containing 9 -1.56166
RAI14 retinoic acid induced 14 -1.53264
RNF223 ring finger protein 223 -1.49978
AGRN agrin -1.49956
LOC653786 otoancorin pseudogene -1.4654
C1ORF159 chromosome 1 open reading frame 159 -1.45109
ANKRD36B ankyrin repeat domain 36B -1.40502
XG Xg blood group -1.40266
DISP1 dispatched homolog 1 (Drosophila) -1.36585