TRAM-34 Gene Set

Dataset DeepCoverMOA Drug Mechanisms of Action
Category proteomics
Type drug perturbation
Description An organochlorine compound that has formula C22H17ClN2. (Chemical Entities of Biological Interest Ontology, CHEBI_34990)
External Link https://pubchem.ncbi.nlm.nih.gov/compound/656734
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Genes

198 proteins with high or low expression in TRAM-34 relative to other proteins from the DeepCoverMOA Drug Mechanisms of Action dataset.

high expression

Symbol Name Standardized Value
RFX2 regulatory factor X, 2 (influences HLA class II expression) 1.52
BORA bora, aurora kinase A activator 0.59
FYN FYN proto-oncogene, Src family tyrosine kinase 0.57
DOCK11 dedicator of cytokinesis 11 0.54
TOB1 transducer of ERBB2, 1 0.54
GLI2 GLI family zinc finger 2 0.52
COA5 cytochrome c oxidase assembly factor 5 0.52
ITGA7 integrin, alpha 7 0.5
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 0.5
NR1H2 nuclear receptor subfamily 1, group H, member 2 0.48
NDEL1 nudE neurodevelopment protein 1-like 1 0.45
ZNF226 zinc finger protein 226 0.43
FKBPL FK506 binding protein like 0.41
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 0.4
CLASP1 cytoplasmic linker associated protein 1 0.39
TMC4 transmembrane channel-like 4 0.39
SLC38A2 solute carrier family 38, member 2 0.39
ITGB8 integrin, beta 8 0.38
RNF130 ring finger protein 130 0.37
C2CD3 C2 calcium-dependent domain containing 3 0.37
PLEKHJ1 pleckstrin homology domain containing, family J member 1 0.37
NAA38 N(alpha)-acetyltransferase 38, NatC auxiliary subunit 0.36
CA8 carbonic anhydrase VIII 0.35
RNF13 ring finger protein 13 0.35
SMAD1 SMAD family member 1 0.35
LMO4 LIM domain only 4 0.35
HMCN1 hemicentin 1 0.34
HTD2 hydroxyacyl-thioester dehydratase type 2 0.34
ALDOA aldolase A, fructose-bisphosphate 0.34
COL6A3 collagen, type VI, alpha 3 0.34
STYK1 serine/threonine/tyrosine kinase 1 0.32
PPP4R4 protein phosphatase 4, regulatory subunit 4 0.32
BOK BCL2-related ovarian killer 0.32
BMP4 bone morphogenetic protein 4 0.31
RGN regucalcin 0.31
MYO15B myosin XVB 0.3
SH2B3 SH2B adaptor protein 3 0.3
COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) 0.3
IGSF8 immunoglobulin superfamily, member 8 0.3
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.3
LIME1 Lck interacting transmembrane adaptor 1 0.3
ZKSCAN2 zinc finger with KRAB and SCAN domains 2 0.3
ZNF367 zinc finger protein 367 0.3
DPP4 dipeptidyl-peptidase 4 0.3
HAPLN3 hyaluronan and proteoglycan link protein 3 0.29
HRH1 histamine receptor H1 0.29
ZNF611 zinc finger protein 611 0.28
RABGAP1L RAB GTPase activating protein 1-like 0.28
TUFT1 tuftelin 1 0.28
FAT2 FAT atypical cadherin 2 0.28
RGS12 regulator of G-protein signaling 12 0.28
VWA5B2 von Willebrand factor A domain containing 5B2 0.28
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.28
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 0.27
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1 0.27
ZNF808 zinc finger protein 808 0.27
TFAP2E transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon) 0.27
ZNF428 zinc finger protein 428 0.27
CCDC91 coiled-coil domain containing 91 0.26
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.26
TMEM64 transmembrane protein 64 0.26
GALT galactose-1-phosphate uridylyltransferase 0.26
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.26
GCSH glycine cleavage system protein H (aminomethyl carrier) 0.26
CCP110 centriolar coiled coil protein 110kDa 0.26
DAPK2 death-associated protein kinase 2 0.25
DOP1A DOP1 leucine zipper like protein A 0.25
CLGN calmegin 0.25
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae) 0.25
MYO15A myosin XVA 0.25
CDC34 cell division cycle 34 0.24
MARCHF6 membrane associated ring-CH-type finger 6 0.24
STYX serine/threonine/tyrosine interacting protein 0.24
RCAN3 RCAN family member 3 0.24
NPTXR neuronal pentraxin receptor 0.24
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.24
SBNO2 strawberry notch homolog 2 (Drosophila) 0.24
ADAM22 ADAM metallopeptidase domain 22 0.24
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 0.24
AKT1S1 AKT1 substrate 1 (proline-rich) 0.24
WIPI1 WD repeat domain, phosphoinositide interacting 1 0.24
RNF8 ring finger protein 8, E3 ubiquitin protein ligase 0.24
PBXIP1 pre-B-cell leukemia homeobox interacting protein 1 0.24
B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 0.24
UBE2R2 ubiquitin-conjugating enzyme E2R 2 0.24
RCN2 reticulocalbin 2, EF-hand calcium binding domain 0.24
LARGE2 LARGE xylosyl- and glucuronyltransferase 2 0.23
FBXO10 F-box protein 10 0.23
CALB2 calbindin 2 0.23
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.23
SEMA4G sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G 0.23
S100A2 S100 calcium binding protein A2 0.23
PEG10 paternally expressed 10 0.23
NRBP2 nuclear receptor binding protein 2 0.23
GTSF1 gametocyte specific factor 1 0.23
PCLO piccolo presynaptic cytomatrix protein 0.23
RMDN2 regulator of microtubule dynamics 2 0.23
ERCC6L2 excision repair cross-complementation group 6-like 2 0.23

low expression

Symbol Name Standardized Value
TEN1 TEN1 CST complex subunit -1.83
APLP1 amyloid beta (A4) precursor-like protein 1 -1.54
B2M beta-2-microglobulin -1.37
MYO3A myosin IIIA -1.04
KMT2B lysine (K)-specific methyltransferase 2B -1.02
NPHP3 nephronophthisis 3 (adolescent) -1.02
SGSH N-sulfoglucosamine sulfohydrolase -0.95
KSR2 kinase suppressor of ras 2 -0.9
SLF1 SMC5-SMC6 complex localization factor 1 -0.87
TRAF3 TNF receptor-associated factor 3 -0.85
ABCA3 ATP-binding cassette, sub-family A (ABC1), member 3 -0.78
ARMCX5 armadillo repeat containing, X-linked 5 -0.77
RAD54L RAD54-like (S. cerevisiae) -0.67
SOX12 SRY (sex determining region Y)-box 12 -0.62
STOML1 stomatin (EPB72)-like 1 -0.6
GATA2 GATA binding protein 2 -0.57
EPB41L1 erythrocyte membrane protein band 4.1-like 1 -0.55
HLA-E major histocompatibility complex, class I, E -0.5
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.48
CNTLN centlein, centrosomal protein -0.48
ANKRD36C ankyrin repeat domain 36C -0.47
PRKD3 protein kinase D3 -0.46
RNF145 ring finger protein 145 -0.45
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2 -0.41
EPB41L5 erythrocyte membrane protein band 4.1 like 5 -0.41
NOS1 nitric oxide synthase 1 (neuronal) -0.4
GALNT14 polypeptide N-acetylgalactosaminyltransferase 14 -0.4
MDM1 Mdm1 nuclear protein homolog (mouse) -0.39
NR1D2 nuclear receptor subfamily 1, group D, member 2 -0.38
POMT1 protein-O-mannosyltransferase 1 -0.38
PAQR7 progestin and adipoQ receptor family member VII -0.37
UPP1 uridine phosphorylase 1 -0.37
RNF5 ring finger protein 5, E3 ubiquitin protein ligase -0.37
WNT10B wingless-type MMTV integration site family, member 10B -0.37
DNASE1L1 deoxyribonuclease I-like 1 -0.37
LMBR1 limb development membrane protein 1 -0.36
TM2D3 TM2 domain containing 3 -0.35
GATA6 GATA binding protein 6 -0.34
ZNF524 zinc finger protein 524 -0.33
CCDC110 coiled-coil domain containing 110 -0.33
SET SET nuclear proto-oncogene -0.32
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor -0.32
MGLL monoglyceride lipase -0.31
TMEM219 transmembrane protein 219 -0.31
CHCHD2P9 coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 9 -0.31
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.31
SIGMAR1 sigma non-opioid intracellular receptor 1 -0.31
SMTN smoothelin -0.3
PPP1R26 protein phosphatase 1, regulatory subunit 26 -0.3
BLOC1S5 biogenesis of lysosomal organelles complex-1, subunit 5, muted -0.29
GLT8D1 glycosyltransferase 8 domain containing 1 -0.29
CUX2 cut-like homeobox 2 -0.29
ALK anaplastic lymphoma receptor tyrosine kinase -0.29
TPGS2 tubulin polyglutamylase complex subunit 2 -0.29
ARL13B ADP-ribosylation factor-like 13B -0.29
DEGS1 delta(4)-desaturase, sphingolipid 1 -0.29
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.28
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) -0.28
BCL3 B-cell CLL/lymphoma 3 -0.28
ALG10B ALG10B, alpha-1,2-glucosyltransferase -0.27
UNKL unkempt family zinc finger-like -0.27
ADARB1 adenosine deaminase, RNA-specific, B1 -0.27
PARP8 poly (ADP-ribose) polymerase family, member 8 -0.27
SCNN1A sodium channel, non voltage gated 1 alpha subunit -0.27
PLAUR plasminogen activator, urokinase receptor -0.26
FAM241A family with sequence similarity 241 member A -0.26
GRAMD1A GRAM domain containing 1A -0.26
TRIM7 tripartite motif containing 7 -0.26
TTC9C tetratricopeptide repeat domain 9C -0.26
TOMM5 translocase of outer mitochondrial membrane 5 homolog (yeast) -0.26
SNTA1 syntrophin, alpha 1 -0.25
SIAH2 siah E3 ubiquitin protein ligase 2 -0.25
STK25 serine/threonine kinase 25 -0.25
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.25
RRAGC Ras-related GTP binding C -0.25
FBXO44 F-box protein 44 -0.25
ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F -0.25
ACVR2A activin A receptor, type IIA -0.25
CD81 CD81 molecule -0.25
CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 -0.25
ZSCAN20 zinc finger and SCAN domain containing 20 -0.25
SESN1 sestrin 1 -0.25
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 -0.25
ARFRP1 ADP-ribosylation factor related protein 1 -0.24
RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase -0.24
BHLHA15 basic helix-loop-helix family, member a15 -0.24
PLCB4 phospholipase C, beta 4 -0.24
ELK3 ELK3, ETS-domain protein (SRF accessory protein 2) -0.24
S100A16 S100 calcium binding protein A16 -0.24
DES desmin -0.24
CAPZB capping protein (actin filament) muscle Z-line, beta -0.24
PTBP1 polypyrimidine tract binding protein 1 -0.24
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 -0.23
BCL2L12 BCL2-like 12 (proline rich) -0.23
TPST1 tyrosylprotein sulfotransferase 1 -0.23
ADGRF1 adhesion G protein-coupled receptor F1 -0.23
BET1L Bet1 golgi vesicular membrane trafficking protein-like -0.23
C18ORF32 chromosome 18 open reading frame 32 -0.22
CHST3 carbohydrate (chondroitin 6) sulfotransferase 3 -0.22
ABRAXAS1 abraxas 1, BRCA1 A complex subunit -0.22