Talc_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Talc perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Talc_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.18842
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.177114
MBNL2 muscleblind-like splicing regulator 2 0.0886429
H1-0 H1.0 linker histone 0.0774477
GOLGB1 golgin B1 0.0767047
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0742134
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0741019
EZR ezrin 0.0730797
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0688752
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0687604
CANX calnexin 0.0629782
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0609777
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0592803
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0580197
SQSTM1 sequestosome 1 0.0574406
PHF3 PHD finger protein 3 0.0561381
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0547706
ZBTB20 zinc finger and BTB domain containing 20 0.0544739
NAMPT nicotinamide phosphoribosyltransferase 0.053741
EIF1 eukaryotic translation initiation factor 1 0.0533223
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0531528
HDLBP high density lipoprotein binding protein 0.0522798
RHOBTB3 Rho-related BTB domain containing 3 0.051637
SEC31A SEC31 homolog A (S. cerevisiae) 0.0493282
DSCAM Down syndrome cell adhesion molecule 0.0491859
MKI67 marker of proliferation Ki-67 0.0482774
RUNX1 runt-related transcription factor 1 0.0474808
AHNAK AHNAK nucleoprotein 0.0453321
APLP2 amyloid beta (A4) precursor-like protein 2 0.0448617
CALU calumenin 0.044403
DSPP dentin sialophosphoprotein 0.0400712
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0398197
GCC2 GRIP and coiled-coil domain containing 2 0.0397887
EXT1 exostosin glycosyltransferase 1 0.0396294
ANXA2 annexin A2 0.039548
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0395072
SEC24D SEC24 family member D 0.0393005
TC2N tandem C2 domains, nuclear 0.0389505
RNF43 ring finger protein 43 0.0386547
EHF ets homologous factor 0.0385479
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0383247
IRF1 interferon regulatory factor 1 0.0367224
UGDH UDP-glucose 6-dehydrogenase 0.0362647
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0361849
CENPF centromere protein F, 350/400kDa 0.0358654
RAB1A RAB1A, member RAS oncogene family 0.0357012
KLF5 Kruppel-like factor 5 (intestinal) 0.0345776
MORF4L2 mortality factor 4 like 2 0.0345561
EFNB2 ephrin-B2 0.0344896
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0343299
SPRED1 sprouty-related, EVH1 domain containing 1 0.0340016
ERRFI1 ERBB receptor feedback inhibitor 1 0.0337549
SEC24A SEC24 family member A 0.0337345
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha 0.0337179
AGR2 anterior gradient 2 0.0336173
HLA-A major histocompatibility complex, class I, A 0.0331378
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0328434
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0325626
PMM2 phosphomannomutase 2 0.03252
BCLAF1 BCL2-associated transcription factor 1 0.0325077
AKAP9 A kinase (PRKA) anchor protein 9 0.0323565
RRBP1 ribosome binding protein 1 0.0322692
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0318113
ANXA1 annexin A1 0.0314245
PRELID2 PRELI domain containing 2 0.0312341
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.030557
BTBD9 BTB (POZ) domain containing 9 0.0305131
PDIA3 protein disulfide isomerase family A, member 3 0.0302624
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 0.029913
WSB1 WD repeat and SOCS box containing 1 0.0296811
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.0296375
RAD51B RAD51 paralog B 0.0294721
TM9SF2 transmembrane 9 superfamily member 2 0.0294694
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0293389
SUCO SUN domain containing ossification factor 0.029002
MEIS2 Meis homeobox 2 0.0281299
INTS6 integrator complex subunit 6 0.0275106
TMEM263 transmembrane protein 263 0.0275069
ANKHD1 ankyrin repeat and KH domain containing 1 0.0274924
NIPBL Nipped-B homolog (Drosophila) 0.0273263
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0273104
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0270712
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0267725
KIAA1217 KIAA1217 0.0265333
ADIPOR2 adiponectin receptor 2 0.0262823
CDHR2 cadherin-related family member 2 0.02615
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.026128
MYO1E myosin IE 0.0261252
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0260516
ZMYND8 zinc finger, MYND-type containing 8 0.0259285
MXI1 MAX interactor 1, dimerization protein 0.025782
LNX1 ligand of numb-protein X 1, E3 ubiquitin protein ligase 0.0256241
ZNF841 zinc finger protein 841 0.0256023
SREBF2 sterol regulatory element binding transcription factor 2 0.0255575
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0253652
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0253541
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0253105
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0252287
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0248821
FNIP1 folliculin interacting protein 1 0.02486

decreased expression

Symbol Name Standardized Value
EPSTI1 epithelial stromal interaction 1 (breast) -0.128443
STS steroid sulfatase (microsomal), isozyme S -0.113629
LYZ lysozyme -0.110775
LCN2 lipocalin 2 -0.0907986
RNF213 ring finger protein 213 -0.0884238
ERBIN erbb2 interacting protein -0.0794763
C6ORF132 chromosome 6 open reading frame 132 -0.072624
TSHZ2 teashirt zinc finger homeobox 2 -0.0672289
ARHGAP26 Rho GTPase activating protein 26 -0.0644638
MX1 MX dynamin-like GTPase 1 -0.062092
MX2 MX dynamin-like GTPase 2 -0.0569439
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0565493
NPSR1 neuropeptide S receptor 1 -0.0563258
MSI2 musashi RNA-binding protein 2 -0.0535024
GMDS GDP-mannose 4,6-dehydratase -0.0521608
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.050653
RIGI RNA sensor RIG-I -0.0470374
ITGA6 integrin, alpha 6 -0.046825
PRKCA protein kinase C, alpha -0.0464824
LAMA4 laminin, alpha 4 -0.0462423
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0459024
VCL vinculin -0.0450613
PKM pyruvate kinase, muscle -0.0446729
SP100 SP100 nuclear antigen -0.0417996
POTEF POTE ankyrin domain family, member F -0.0388987
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0387368
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0386693
LPP LIM domain containing preferred translocation partner in lipoma -0.0382356
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0379789
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0374171
RABGAP1L RAB GTPase activating protein 1-like -0.0373003
TJP1 tight junction protein 1 -0.0340873
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0339259
PERP PERP, TP53 apoptosis effector -0.0334975
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0332336
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0331126
MYH14 myosin, heavy chain 14, non-muscle -0.0328252
TM4SF19 transmembrane 4 L six family member 19 -0.0325095
IGFBP3 insulin-like growth factor binding protein 3 -0.0319899
IFIH1 interferon induced with helicase C domain 1 -0.0318044
EFHD2 EF-hand domain family, member D2 -0.0317549
ADAM10 ADAM metallopeptidase domain 10 -0.0309047
SETX senataxin -0.029095
PUM1 pumilio RNA-binding family member 1 -0.0290941
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0278801
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0277332
TSC22D1 TSC22 domain family, member 1 -0.0275141
BCL2L1 BCL2-like 1 -0.0273728
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0273728
ATP11A ATPase, class VI, type 11A -0.0271989
CTSD cathepsin D -0.0267253
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0266324
IFI27 interferon, alpha-inducible protein 27 -0.0256641
AKAP13 A kinase (PRKA) anchor protein 13 -0.0256193
ZNF148 zinc finger protein 148 -0.0255715
UBAP2 ubiquitin associated protein 2 -0.0255274
SRRM2 serine/arginine repetitive matrix 2 -0.0254707
NCEH1 neutral cholesterol ester hydrolase 1 -0.025464
TMSB10 thymosin beta 10 -0.0249788
PLSCR2 phospholipid scramblase 2 -0.0248816
RPL35A ribosomal protein L35a -0.0245514
TXNRD1 thioredoxin reductase 1 -0.0243385
PSEN1 presenilin 1 -0.0242721
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0241551
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.024003
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0238033
GTF2IRD1 GTF2I repeat domain containing 1 -0.0236827
FTL ferritin, light polypeptide -0.0234757
ZNF207 zinc finger protein 207 -0.0231536
PNN pinin, desmosome associated protein -0.0231151
SAMHD1 SAM domain and HD domain 1 -0.0230895
PARP9 poly (ADP-ribose) polymerase family, member 9 -0.022876
LIMA1 LIM domain and actin binding 1 -0.022711
TRIO trio Rho guanine nucleotide exchange factor -0.0226996
LOC112694756 uncharaterized LOC112694756 -0.0226366
LY6E lymphocyte antigen 6 complex, locus E -0.0225809
PMP22 peripheral myelin protein 22 -0.0223442
TXNIP thioredoxin interacting protein -0.0223176
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 -0.0222994
VDAC1 voltage-dependent anion channel 1 -0.0221837
ZHX2 zinc fingers and homeoboxes 2 -0.022071
LYN LYN proto-oncogene, Src family tyrosine kinase -0.0220381
RAB7A RAB7A, member RAS oncogene family -0.0219187
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0215509
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0209675
ACTG1 actin gamma 1 -0.0207952
FNDC3A fibronectin type III domain containing 3A -0.020664
NAV1 neuron navigator 1 -0.0205562
IFI6 interferon, alpha-inducible protein 6 -0.0203494
KDM2A lysine (K)-specific demethylase 2A -0.02029
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0202366
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0201594
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0201326
SAMD9L sterile alpha motif domain containing 9-like -0.0198032
ETV6 ets variant 6 -0.0195493
LMTK2 lemur tyrosine kinase 2 -0.0194231
PFN1 profilin 1 -0.0193624
MAML2 mastermind-like 2 (Drosophila) -0.0193547
RBM25 RNA binding motif protein 25 -0.0193542
AKR1C2 aldo-keto reductase family 1, member C2 -0.0192419