Talc_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Talc perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Talc_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.13397
RPS2 ribosomal protein S2 0.113194
ANXA1 annexin A1 0.101255
EZR ezrin 0.0968313
FAM13A family with sequence similarity 13, member A 0.0775486
H1-0 H1.0 linker histone 0.073714
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0665787
PTMA prothymosin, alpha 0.064902
ANXA2 annexin A2 0.0633191
PIGR polymeric immunoglobulin receptor 0.062782
DSPP dentin sialophosphoprotein 0.0609925
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0543165
LMO7 LIM domain 7 0.0534714
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0515094
EMP1 epithelial membrane protein 1 0.0510754
RPL12 ribosomal protein L12 0.048615
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.045062
DDIT4 DNA-damage-inducible transcript 4 0.0443092
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0436679
RPL18 ribosomal protein L18 0.0428806
KLF6 Kruppel-like factor 6 0.0416989
AFF1 AF4/FMR2 family, member 1 0.0415133
PTPRR protein tyrosine phosphatase, receptor type, R 0.0398725
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0390043
DSG2 desmoglein 2 0.0381697
LOC102724023 ES1 protein homolog, mitochondrial 0.0373637
ATF4 activating transcription factor 4 0.0373007
NAMPT nicotinamide phosphoribosyltransferase 0.0371505
WASF2 WAS protein family, member 2 0.0370557
RNF145 ring finger protein 145 0.0363341
RPL3 ribosomal protein L3 0.0350972
ZNF292 zinc finger protein 292 0.0349387
RACK1 receptor for activated C kinase 1 0.0346281
USP6NL USP6 N-terminal like 0.0342675
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0338297
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0336628
ITGA6 integrin, alpha 6 0.0333986
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0324162
GDF15 growth differentiation factor 15 0.0323596
EREG epiregulin 0.032254
RPL36 ribosomal protein L36 0.0322524
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0320938
CSDE1 cold shock domain containing E1, RNA-binding 0.032062
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0316402
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 0.0311205
BHLHE40 basic helix-loop-helix family, member e40 0.030442
RORA RAR-related orphan receptor A 0.0304167
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0303259
ERRFI1 ERBB receptor feedback inhibitor 1 0.0302849
KITLG KIT ligand 0.0298563
ESYT2 extended synaptotagmin-like protein 2 0.0297943
RPS3 ribosomal protein S3 0.0293607
CCNY cyclin Y 0.0292062
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0288395
FBXO32 F-box protein 32 0.0286501
CLCN3 chloride channel, voltage-sensitive 3 0.0284637
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0282544
PER2 period circadian clock 2 0.0279672
RPL4 ribosomal protein L4 0.0276285
MUC17 mucin 17, cell surface associated 0.0270862
MLF1 myeloid leukemia factor 1 0.026185
ARHGAP21 Rho GTPase activating protein 21 0.0261081
TPD52 tumor protein D52 0.0260494
PUM2 pumilio RNA-binding family member 2 0.0260491
CCNL1 cyclin L1 0.0255262
RPL6 ribosomal protein L6 0.0254307
EXPH5 exophilin 5 0.0253936
HELZ helicase with zinc finger 0.0249092
SHROOM3 shroom family member 3 0.0248407
DSCAM Down syndrome cell adhesion molecule 0.0247735
CASZ1 castor zinc finger 1 0.0241634
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0240852
PPARG peroxisome proliferator-activated receptor gamma 0.0240748
ARHGAP42 Rho GTPase activating protein 42 0.0240463
RPL32 ribosomal protein L32 0.023904
YBX3 Y box binding protein 3 0.0237888
DERA deoxyribose-phosphate aldolase (putative) 0.0237352
KMT2E lysine (K)-specific methyltransferase 2E 0.0237039
NUP54 nucleoporin 54kDa 0.0234974
RHPN2 rhophilin, Rho GTPase binding protein 2 0.0232458
RPS12 ribosomal protein S12 0.0232137
MUC13 mucin 13, cell surface associated 0.0230014
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0226975
ZFP36L1 ZFP36 ring finger protein-like 1 0.0226601
H1-4 H1.4 linker histone, cluster member 0.0225584
RSRC2 arginine/serine-rich coiled-coil 2 0.0223735
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.0222466
GATA6 GATA binding protein 6 0.0218963
UGCG UDP-glucose ceramide glucosyltransferase 0.0218156
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0214615
TRIB1 tribbles pseudokinase 1 0.0214282
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.02122
ATF3 activating transcription factor 3 0.0211529
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0206183
MACF1 microtubule-actin crosslinking factor 1 0.0205478
LGALS4 lectin, galactoside-binding, soluble, 4 0.0204085
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0201935
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0201346
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0200588
LRRC1 leucine rich repeat containing 1 0.0200401

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.243503
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.196997
TPT1 tumor protein, translationally-controlled 1 -0.144953
TMSB10 thymosin beta 10 -0.113069
UBC ubiquitin C -0.101009
CALR calreticulin -0.0940725
RPL35A ribosomal protein L35a -0.0893498
GMDS GDP-mannose 4,6-dehydratase -0.0805071
VCL vinculin -0.0792764
RPS27A ribosomal protein S27a -0.0779402
TPM4 tropomyosin 4 -0.0767292
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0756619
PKM pyruvate kinase, muscle -0.0697528
AHNAK AHNAK nucleoprotein -0.0651863
NPSR1 neuropeptide S receptor 1 -0.0624902
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0618364
PDIA3 protein disulfide isomerase family A, member 3 -0.0612088
PDIA4 protein disulfide isomerase family A, member 4 -0.0607238
RPS8 ribosomal protein S8 -0.0605321
RPS24 ribosomal protein S24 -0.060447
ACTG1 actin gamma 1 -0.0599249
EEF2 eukaryotic translation elongation factor 2 -0.0543476
KRT8 keratin 8, type II -0.0535428
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0530593
ALCAM activated leukocyte cell adhesion molecule -0.0525941
RPL31 ribosomal protein L31 -0.0491982
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0487231
RPLP2 ribosomal protein, large, P2 -0.0486538
RPL23 ribosomal protein L23 -0.0469842
SRRM2 serine/arginine repetitive matrix 2 -0.0461752
VDAC1 voltage-dependent anion channel 1 -0.0459351
DIAPH2 diaphanous-related formin 2 -0.044539
RPS13 ribosomal protein S13 -0.0435706
RPL9 ribosomal protein L9 -0.0429468
FHIT fragile histidine triad -0.041664
POTEF POTE ankyrin domain family, member F -0.0409006
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0399339
FTL ferritin, light polypeptide -0.0388883
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0379476
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.037629
CANX calnexin -0.0373723
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0369995
MAP4 microtubule-associated protein 4 -0.0368577
TFF1 trefoil factor 1 -0.0365569
NALF1 NALCN channel auxiliary factor 1 -0.03611
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0360877
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0358284
DEK DEK proto-oncogene -0.0353872
PATJ PATJ crumbs cell polarity complex component -0.035056
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0348007
EXT1 exostosin glycosyltransferase 1 -0.0345453
RPL7A ribosomal protein L7a -0.0341839
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0337344
TPM1 tropomyosin 1 (alpha) -0.0335372
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0334559
RPS25 ribosomal protein S25 -0.032721
ENO2 enolase 2 (gamma, neuronal) -0.0322908
HM13 histocompatibility (minor) 13 -0.0316831
TBC1D22A TBC1 domain family, member 22A -0.0314802
IER3 immediate early response 3 -0.0314499
BTBD9 BTB (POZ) domain containing 9 -0.0312325
S100A6 S100 calcium binding protein A6 -0.030771
ZBTB20 zinc finger and BTB domain containing 20 -0.0305232
ANTXR2 anthrax toxin receptor 2 -0.0304434
CCND1 cyclin D1 -0.0303219
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0298804
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0296421
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0293474
RPS29 ribosomal protein S29 -0.0290744
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.028628
SFPQ splicing factor proline/glutamine-rich -0.0285451
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0284653
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0283883
MYH9 myosin, heavy chain 9, non-muscle -0.0281118
EGFR epidermal growth factor receptor -0.0280804
RPS23 ribosomal protein S23 -0.0279821
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0279686
ENO1 enolase 1, (alpha) -0.0278451
PALLD palladin, cytoskeletal associated protein -0.0278171
ABR active BCR-related -0.0277526
ETV6 ets variant 6 -0.0275963
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0272302
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0270172
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle -0.0269278
FAF1 Fas (TNFRSF6) associated factor 1 -0.0268249
NUCB2 nucleobindin 2 -0.0267139
RPL38 ribosomal protein L38 -0.0261796
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0261287
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0261275
FRMD5 FERM domain containing 5 -0.0259141
LDHA lactate dehydrogenase A -0.0256926
ATP5F1B ATP synthase F1 subunit beta -0.0255249
KRT18 keratin 18, type I -0.0254736
MAML3 mastermind-like 3 (Drosophila) -0.025337
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0252639
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0252076
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0251826
RPL15 ribosomal protein L15 -0.0251521
ANKRD17 ankyrin repeat domain 17 -0.025128
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 -0.0247118