Talc_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Talc perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Talc_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.181207
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.175439
FN1 fibronectin 1 0.171807
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.170922
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.16416
FTH1 ferritin, heavy polypeptide 1 0.0910608
FAM13A family with sequence similarity 13, member A 0.0902612
ERRFI1 ERBB receptor feedback inhibitor 1 0.0892067
ELL2 elongation factor, RNA polymerase II, 2 0.0885047
IGFBP3 insulin-like growth factor binding protein 3 0.0838594
NAMPT nicotinamide phosphoribosyltransferase 0.0832707
S100A6 S100 calcium binding protein A6 0.0757322
DSCAM Down syndrome cell adhesion molecule 0.0750795
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0721524
GOLGA4 golgin A4 0.060088
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0599661
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0555833
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0550856
LMO7 LIM domain 7 0.0547154
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0521673
TM4SF1 transmembrane 4 L six family member 1 0.0515688
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0508934
TFG TRK-fused gene 0.0494798
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0451907
RNF145 ring finger protein 145 0.0447995
BZW1 basic leucine zipper and W2 domains 1 0.0438796
RAD21 RAD21 homolog (S. pombe) 0.0433697
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0433037
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0432022
NDRG1 N-myc downstream regulated 1 0.0430588
ARRDC3 arrestin domain containing 3 0.0427394
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0420374
SEC23A Sec23 homolog A (S. cerevisiae) 0.0411586
PGK1 phosphoglycerate kinase 1 0.040761
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0404701
RACK1 receptor for activated C kinase 1 0.0400911
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0396809
RPL4 ribosomal protein L4 0.0393484
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0383573
CLINT1 clathrin interactor 1 0.038162
DSG2 desmoglein 2 0.0378728
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0377834
FNDC3B fibronectin type III domain containing 3B 0.0371765
ALCAM activated leukocyte cell adhesion molecule 0.0370217
CANX calnexin 0.036874
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0366497
RAB1A RAB1A, member RAS oncogene family 0.0362898
ASPH aspartate beta-hydroxylase 0.0362098
TMSB4X thymosin beta 4, X-linked 0.0359587
CDCP1 CUB domain containing protein 1 0.0357454
RPLP0 ribosomal protein, large, P0 0.0357398
H1-0 H1.0 linker histone 0.0344435
HMGB2 high mobility group box 2 0.0335444
PRRC1 proline-rich coiled-coil 1 0.0334372
TMEM123 transmembrane protein 123 0.0333516
CALU calumenin 0.0331872
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.03306
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0325977
UBA6 ubiquitin-like modifier activating enzyme 6 0.0325926
NPEPPS aminopeptidase puromycin sensitive 0.0325011
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0317578
MCTP2 multiple C2 domains, transmembrane 2 0.0308994
LDHA lactate dehydrogenase A 0.0307125
ADAR adenosine deaminase, RNA-specific 0.0305495
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0299376
SGMS2 sphingomyelin synthase 2 0.0298867
TMEM39A transmembrane protein 39A 0.0294851
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0289347
STEAP4 STEAP family member 4 0.0282134
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.028155
TSC22D2 TSC22 domain family, member 2 0.0280783
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0280056
COPA coatomer protein complex, subunit alpha 0.027858
ENO1 enolase 1, (alpha) 0.0278097
UBC ubiquitin C 0.0276265
CSDE1 cold shock domain containing E1, RNA-binding 0.0274057
ANXA2 annexin A2 0.0269403
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0266293
ADAM9 ADAM metallopeptidase domain 9 0.0265794
PTBP3 polypyrimidine tract binding protein 3 0.026502
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0261014
AHNAK AHNAK nucleoprotein 0.0259771
ESYT2 extended synaptotagmin-like protein 2 0.0259025
DUSP10 dual specificity phosphatase 10 0.0258263
EREG epiregulin 0.0256691
NRIP1 nuclear receptor interacting protein 1 0.0254195
TES testin LIM domain protein 0.0254095
RAB11FIP1 RAB11 family interacting protein 1 (class I) 0.0254092
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0250512
HDLBP high density lipoprotein binding protein 0.0245326
PELI1 pellino E3 ubiquitin protein ligase 1 0.0238522
ARL5B ADP-ribosylation factor-like 5B 0.0237724
TKT transketolase 0.0234615
DSPP dentin sialophosphoprotein 0.0233271
ANXA1 annexin A1 0.0231988
CNN3 calponin 3, acidic 0.0228132
PDE8A phosphodiesterase 8A 0.0227988
TOP1 topoisomerase (DNA) I 0.0227099
MARCHF6 membrane associated ring-CH-type finger 6 0.0226933
TMEM263 transmembrane protein 263 0.0221767

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.169378
RPL35A ribosomal protein L35a -0.111403
FTL ferritin, light polypeptide -0.105841
SAMD4A sterile alpha motif domain containing 4A -0.0916488
LPP LIM domain containing preferred translocation partner in lipoma -0.0903285
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0805897
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0793428
TPT1 tumor protein, translationally-controlled 1 -0.0775112
TMSB10 thymosin beta 10 -0.0707884
HLA-B major histocompatibility complex, class I, B -0.0672125
RPS29 ribosomal protein S29 -0.0637389
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0567971
RNF213 ring finger protein 213 -0.0547708
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.052704
POTEF POTE ankyrin domain family, member F -0.0496605
EXT1 exostosin glycosyltransferase 1 -0.0488737
RBM47 RNA binding motif protein 47 -0.0482763
MCL1 myeloid cell leukemia 1 -0.0469845
ZFAND3 zinc finger, AN1-type domain 3 -0.0448858
PKM pyruvate kinase, muscle -0.0429132
ENO2 enolase 2 (gamma, neuronal) -0.0428522
CCND1 cyclin D1 -0.0416556
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0413751
MAP3K13 mitogen-activated protein kinase kinase kinase 13 -0.0407064
NAV2 neuron navigator 2 -0.0402561
RPL38 ribosomal protein L38 -0.0396415
WSB1 WD repeat and SOCS box containing 1 -0.0389473
INTS6 integrator complex subunit 6 -0.0389266
RPS13 ribosomal protein S13 -0.0385975
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0379671
RPL31 ribosomal protein L31 -0.0378396
RPL9 ribosomal protein L9 -0.0376545
ACTG1 actin gamma 1 -0.0372343
VCL vinculin -0.0369848
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0365443
PTK2 protein tyrosine kinase 2 -0.0364249
ERBIN erbb2 interacting protein -0.0361299
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0353645
RBM25 RNA binding motif protein 25 -0.0344634
MX2 MX dynamin-like GTPase 2 -0.0344014
RPL37A ribosomal protein L37a -0.0339526
RAD51B RAD51 paralog B -0.0323698
RIGI RNA sensor RIG-I -0.0321382
PDLIM5 PDZ and LIM domain 5 -0.0320183
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0319768
RPS10 ribosomal protein S10 -0.0319147
MED13 mediator complex subunit 13 -0.0318206
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0315182
LMNA lamin A/C -0.0313215
RPS23 ribosomal protein S23 -0.0305857
IFI16 interferon, gamma-inducible protein 16 -0.0304756
RPLP2 ribosomal protein, large, P2 -0.0303586
TBCA tubulin folding cofactor A -0.0299752
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0298898
CTBP2 C-terminal binding protein 2 -0.0296086
VEGFA vascular endothelial growth factor A -0.0294325
EGR1 early growth response 1 -0.0288541
UQCRB ubiquinol-cytochrome c reductase binding protein -0.028569
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.0285395
IFIH1 interferon induced with helicase C domain 1 -0.0284306
CAVIN1 caveolae associated protein 1 -0.0282808
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0282355
MYH9 myosin, heavy chain 9, non-muscle -0.0281947
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0277387
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0276937
CTSD cathepsin D -0.0275444
ZNF207 zinc finger protein 207 -0.0272678
MON2 MON2 homolog (S. cerevisiae) -0.0272154
PLEC plectin -0.0271894
NABP1 nucleic acid binding protein 1 -0.0264861
RPS24 ribosomal protein S24 -0.0264515
WARS1 tryptophanyl-tRNA synthetase 1 -0.0261746
BAZ1A bromodomain adjacent to zinc finger domain, 1A -0.026125
PGBD5 piggyBac transposable element derived 5 -0.0261225
ZBTB20 zinc finger and BTB domain containing 20 -0.0257218
DST dystonin -0.0256977
KPNB1 karyopherin (importin) beta 1 -0.0253266
PDXK pyridoxal (pyridoxine, vitamin B6) kinase -0.0252573
SP100 SP100 nuclear antigen -0.025233
FNBP4 formin binding protein 4 -0.0250857
ZNF609 zinc finger protein 609 -0.0250267
KDM4B lysine (K)-specific demethylase 4B -0.0248551
PPP1R13B protein phosphatase 1, regulatory subunit 13B -0.0247514
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 -0.0247373
RPS3 ribosomal protein S3 -0.024651
AEBP2 AE binding protein 2 -0.0245876
GOLGB1 golgin B1 -0.0244924
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0243977
TBC1D22A TBC1 domain family, member 22A -0.0241457
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 -0.024096
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0240055
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.023997
RPS21 ribosomal protein S21 -0.0239838
G0S2 G0/G1 switch 2 -0.0238684
ATXN1 ataxin 1 -0.0236868
HLA-E major histocompatibility complex, class I, E -0.0235678
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0235512
BPTF bromodomain PHD finger transcription factor -0.0235429
RPL28 ribosomal protein L28 -0.023542
RPS25 ribosomal protein S25 -0.0231967