Talc_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Talc perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Talc_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.0997537
TM4SF1 transmembrane 4 L six family member 1 0.0873881
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0718239
PGK1 phosphoglycerate kinase 1 0.0581833
EFNA5 ephrin-A5 0.053911
RGS2 regulator of G-protein signaling 2 0.0519616
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0510105
TFPI2 tissue factor pathway inhibitor 2 0.0471879
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0464843
CXCL8 chemokine (C-X-C motif) ligand 8 0.044921
PCBP3 poly(rC) binding protein 3 0.0438222
ERRFI1 ERBB receptor feedback inhibitor 1 0.0437544
DDIT4 DNA-damage-inducible transcript 4 0.0409956
NEK7 NIMA-related kinase 7 0.0406555
FAM13A family with sequence similarity 13, member A 0.0404963
TGFBI transforming growth factor, beta-induced, 68kDa 0.0395474
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0388407
TRIO trio Rho guanine nucleotide exchange factor 0.0384008
NCKAP1 NCK-associated protein 1 0.0379512
AGFG1 ArfGAP with FG repeats 1 0.0342694
TGFBR1 transforming growth factor, beta receptor 1 0.0334397
BZW1 basic leucine zipper and W2 domains 1 0.0330975
RAB3B RAB3B, member RAS oncogene family 0.0330011
SRGN serglycin 0.0320835
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0317553
ITPRID2 ITPR interacting domain containing 2 0.0315034
MXI1 MAX interactor 1, dimerization protein 0.0314924
ELL2 elongation factor, RNA polymerase II, 2 0.0310633
DGKD diacylglycerol kinase, delta 130kDa 0.0307605
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0304221
ESYT2 extended synaptotagmin-like protein 2 0.0290761
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0271596
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0268064
ENO1 enolase 1, (alpha) 0.0257981
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.025683
ATP13A3 ATPase type 13A3 0.0256823
RAI1 retinoic acid induced 1 0.0256794
ECT2 epithelial cell transforming 2 0.025469
PLAUR plasminogen activator, urokinase receptor 0.0252329
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0252236
SEPTIN10 septin 10 0.024763
OGA O-GlcNAcase 0.0246118
MKI67 marker of proliferation Ki-67 0.0237888
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.0237199
BIRC2 baculoviral IAP repeat containing 2 0.0232494
RPL4 ribosomal protein L4 0.02272
ARHGAP29 Rho GTPase activating protein 29 0.0225789
RO60 Ro60, Y RNA binding protein 0.0224822
TBXT T-box transcription factor T 0.0217915
USP3 ubiquitin specific peptidase 3 0.0217571
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0212735
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0211571
SRP9 signal recognition particle 9kDa 0.0210533
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0208693
SFXN1 sideroflexin 1 0.020536
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.020203
PUM2 pumilio RNA-binding family member 2 0.0201698
KIAA1958 KIAA1958 0.0200392
NGLY1 N-glycanase 1 0.0199573
H1-4 H1.4 linker histone, cluster member 0.019698
RPL6 ribosomal protein L6 0.0193909
STC1 stanniocalcin 1 0.0192076
TMEM263 transmembrane protein 263 0.0187279
LIMCH1 LIM and calponin homology domains 1 0.0186563
TM9SF2 transmembrane 9 superfamily member 2 0.0182919
BRWD3 bromodomain and WD repeat domain containing 3 0.0181851
SAMD4A sterile alpha motif domain containing 4A 0.0181035
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0180059
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0179791
RSL1D1 ribosomal L1 domain containing 1 0.0179166
CKAP5 cytoskeleton associated protein 5 0.0178811
RPL3 ribosomal protein L3 0.0176585
SUB1 SUB1 homolog (S. cerevisiae) 0.017212
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0170694
MLKL mixed lineage kinase domain-like 0.0168666
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.0168341
CLDN1 claudin 1 0.0168284
CTSC cathepsin C 0.0166911
ZFR zinc finger RNA binding protein 0.0164728
HP1BP3 heterochromatin protein 1, binding protein 3 0.0162197
FMNL2 formin-like 2 0.0161477
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0161405
TNPO1 transportin 1 0.0160418
ANKRD36 ankyrin repeat domain 36 0.0159748
KDM3A lysine (K)-specific demethylase 3A 0.0157851
BCLAF1 BCL2-associated transcription factor 1 0.0156726
ECPAS Ecm29 proteasome adaptor and scaffold 0.0155898
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0155864
AFDN afadin, adherens junction formation factor 0.0154811
ACSL4 acyl-CoA synthetase long-chain family member 4 0.015459
IL1RAP interleukin 1 receptor accessory protein 0.0152972
TNIP1 TNFAIP3 interacting protein 1 0.015275
SLC16A6 solute carrier family 16, member 6 0.0152381
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.015093
WWTR1 WW domain containing transcription regulator 1 0.0146553
CFLAR CASP8 and FADD-like apoptosis regulator 0.0146147
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0145688
KLF6 Kruppel-like factor 6 0.014528
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0144498
CORO1C coronin, actin binding protein, 1C 0.0143809

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.268835
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.258526
FN1 fibronectin 1 -0.129588
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.116597
VIM vimentin -0.106113
FTH1 ferritin, heavy polypeptide 1 -0.0852108
RPS6 ribosomal protein S6 -0.0850917
TMSB10 thymosin beta 10 -0.0836173
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0835061
PDE4D phosphodiesterase 4D, cAMP-specific -0.0807238
RPLP1 ribosomal protein, large, P1 -0.0806716
RPL35A ribosomal protein L35a -0.0792134
EEF2 eukaryotic translation elongation factor 2 -0.0707412
IGFBP3 insulin-like growth factor binding protein 3 -0.0643699
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.06032
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.060308
PKM pyruvate kinase, muscle -0.0589028
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0569907
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0565768
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0564597
S100A6 S100 calcium binding protein A6 -0.0554505
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0541109
EGR1 early growth response 1 -0.0539936
TPT1 tumor protein, translationally-controlled 1 -0.053923
COL5A2 collagen, type V, alpha 2 -0.0537884
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0536421
RPS24 ribosomal protein S24 -0.0532979
CALR calreticulin -0.0528195
RPL23 ribosomal protein L23 -0.0522956
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0514891
FTL ferritin, light polypeptide -0.0514864
LOC112694756 uncharaterized LOC112694756 -0.0514484
MCL1 myeloid cell leukemia 1 -0.0508743
PDE10A phosphodiesterase 10A -0.0502244
COL4A5 collagen, type IV, alpha 5 -0.0470973
LDHA lactate dehydrogenase A -0.0464246
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0453642
RPLP0 ribosomal protein, large, P0 -0.0443584
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0439726
NALF1 NALCN channel auxiliary factor 1 -0.0438845
NDRG1 N-myc downstream regulated 1 -0.0435424
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0428234
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0426495
RPS19 ribosomal protein S19 -0.0422939
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0418785
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.041477
UBC ubiquitin C -0.0413485
RPS4X ribosomal protein S4, X-linked -0.0400327
PDIA3 protein disulfide isomerase family A, member 3 -0.0399335
POTEF POTE ankyrin domain family, member F -0.0393726
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0387264
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0386808
RPS23 ribosomal protein S23 -0.0384377
RPL28 ribosomal protein L28 -0.0380722
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0373381
RPS8 ribosomal protein S8 -0.0365388
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0365156
RPL39 ribosomal protein L39 -0.0363523
ZNF207 zinc finger protein 207 -0.0361581
RTN1 reticulon 1 -0.0360132
YBX1 Y box binding protein 1 -0.0356316
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0355974
PCBP2 poly(rC) binding protein 2 -0.0355259
RPL9 ribosomal protein L9 -0.0350339
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0347947
RPLP2 ribosomal protein, large, P2 -0.0345814
RPS21 ribosomal protein S21 -0.0345305
FNDC3B fibronectin type III domain containing 3B -0.0344037
EEF1G eukaryotic translation elongation factor 1 gamma -0.0342005
LAMA5 laminin, alpha 5 -0.033969
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0338933
HLA-B major histocompatibility complex, class I, B -0.0336339
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0334413
GLRX glutaredoxin (thioltransferase) -0.0330481
RPL34 ribosomal protein L34 -0.03278
TXNRD1 thioredoxin reductase 1 -0.0327431
RPL31 ribosomal protein L31 -0.0322724
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0319529
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0318616
RPS16 ribosomal protein S16 -0.0317577
RPS28 ribosomal protein S28 -0.0317438
DPP10 dipeptidyl-peptidase 10 (non-functional) -0.0315836
DOCK4 dedicator of cytokinesis 4 -0.0315703
GRB10 growth factor receptor-bound protein 10 -0.030899
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0304946
RPL27A ribosomal protein L27a -0.0300433
RPL11 ribosomal protein L11 -0.0296186
RPL38 ribosomal protein L38 -0.0296083
PFN1 profilin 1 -0.0295727
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0294381
RPS14 ribosomal protein S14 -0.0291438
DOCK5 dedicator of cytokinesis 5 -0.0289706
EXT1 exostosin glycosyltransferase 1 -0.028624
GNAS GNAS complex locus -0.0282668
TOB1 transducer of ERBB2, 1 -0.0280972
RPS20 ribosomal protein S20 -0.0280958
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0276694
SLC38A2 solute carrier family 38, member 2 -0.0276148
S100A10 S100 calcium binding protein A10 -0.0273419
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0273124