Tazarotene_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tazarotene perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tazarotene_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PLAT plasminogen activator, tissue 0.16514
DLG1 discs, large homolog 1 (Drosophila) 0.0954536
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.067374
MYADM myeloid-associated differentiation marker 0.0513829
PSD3 pleckstrin and Sec7 domain containing 3 0.0419465
NDRG1 N-myc downstream regulated 1 0.0412303
HLA-B major histocompatibility complex, class I, B 0.0367201
SBF2 SET binding factor 2 0.0310866
GPC6 glypican 6 0.0309705
COL3A1 collagen, type III, alpha 1 0.0306917
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0303235
NRIP1 nuclear receptor interacting protein 1 0.0303139
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0297957
ATP13A3 ATPase type 13A3 0.0268843
LOXL2 lysyl oxidase-like 2 0.0261739
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0261075
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0245881
ADAM19 ADAM metallopeptidase domain 19 0.0244427
EIF1 eukaryotic translation initiation factor 1 0.0242254
GOLGA4 golgin A4 0.024069
ESYT2 extended synaptotagmin-like protein 2 0.0237376
NAV2 neuron navigator 2 0.022585
AVL9 AVL9 homolog (S. cerevisiase) 0.0221038
RHOBTB3 Rho-related BTB domain containing 3 0.022047
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0218159
MYO9A myosin IXA 0.0215666
FNIP1 folliculin interacting protein 1 0.0213071
ARHGAP5 Rho GTPase activating protein 5 0.0212511
MTSS1 metastasis suppressor 1 0.0202632
TMCC1 transmembrane and coiled-coil domain family 1 0.0192201
RASA2 RAS p21 protein activator 2 0.0188609
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.018269
CTSB cathepsin B 0.0180708
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0177832
COG5 component of oligomeric golgi complex 5 0.01766
TM4SF1 transmembrane 4 L six family member 1 0.0173097
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0172693
ZBTB20 zinc finger and BTB domain containing 20 0.0172564
DPYSL3 dihydropyrimidinase-like 3 0.017087
ABTB3 ankyrin repeat and BTB domain containing 3 0.0170042
MICU3 mitochondrial calcium uptake family, member 3 0.0166945
CD99 CD99 molecule 0.0166247
STC1 stanniocalcin 1 0.0165797
FTL ferritin, light polypeptide 0.0163775
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0163488
WDFY1 WD repeat and FYVE domain containing 1 0.0162946
HIP1 huntingtin interacting protein 1 0.0161878
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.0161704
AKAP9 A kinase (PRKA) anchor protein 9 0.0160671
SKAP2 src kinase associated phosphoprotein 2 0.015843
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.0157713
RPS6 ribosomal protein S6 0.0157109
FBXL2 F-box and leucine-rich repeat protein 2 0.0155759
FTH1 ferritin, heavy polypeptide 1 0.0154147
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0153986
SLC22A23 solute carrier family 22, member 23 0.015335
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0153042
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0152768
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0151991
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0151709
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0149866
FRMD5 FERM domain containing 5 0.0149822
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0146448
RPL37A ribosomal protein L37a 0.0146377
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0145171
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0145008
GCC2 GRIP and coiled-coil domain containing 2 0.0144529
RPS13 ribosomal protein S13 0.0143831
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0143223
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 0.0142421
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0142337
ANXA4 annexin A4 0.0141642
MBNL2 muscleblind-like splicing regulator 2 0.0141475
SPIRE1 spire-type actin nucleation factor 1 0.0140352
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0140092
SH3PXD2B SH3 and PX domains 2B 0.0136674
KIF16B kinesin family member 16B 0.0136162
NGLY1 N-glycanase 1 0.0135916
TIMP2 TIMP metallopeptidase inhibitor 2 0.0135867
SKIC3 SKI3 subunit of superkiller complex 0.0135803
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0134126
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.013355
WWTR1 WW domain containing transcription regulator 1 0.0131573
HIBCH 3-hydroxyisobutyryl-CoA hydrolase 0.0131235
SRRM2 serine/arginine repetitive matrix 2 0.0129497
OPTN optineurin 0.0129118
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0128365
ZEB2 zinc finger E-box binding homeobox 2 0.0127994
BPTF bromodomain PHD finger transcription factor 0.0126555
DPYSL2 dihydropyrimidinase-like 2 0.0125423
RPL31 ribosomal protein L31 0.0125283
ELL2 elongation factor, RNA polymerase II, 2 0.0125139
NMT2 N-myristoyltransferase 2 0.0124574
MAP4 microtubule-associated protein 4 0.0124284
SMG6 SMG6 nonsense mediated mRNA decay factor 0.0123846
IL1RAP interleukin 1 receptor accessory protein 0.0122781
NPC1 Niemann-Pick disease, type C1 0.0122736
DCAF7 DDB1 and CUL4 associated factor 7 0.0122524
ITCH itchy E3 ubiquitin protein ligase 0.0122503
USP9Y ubiquitin specific peptidase 9, Y-linked 0.0122081

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.228478
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.181696
CDH13 cadherin 13 -0.174249
AHNAK AHNAK nucleoprotein -0.166823
COL5A1 collagen, type V, alpha 1 -0.144315
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.130983
TRIO trio Rho guanine nucleotide exchange factor -0.129414
FN1 fibronectin 1 -0.118588
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.118028
RIGI RNA sensor RIG-I -0.11358
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.110414
MAP1B microtubule-associated protein 1B -0.106549
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.101409
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.100909
ABI3BP ABI family, member 3 (NESH) binding protein -0.0989962
SAMD9 sterile alpha motif domain containing 9 -0.0983787
IGFBP3 insulin-like growth factor binding protein 3 -0.0953095
CANX calnexin -0.0918467
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0834925
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0832904
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0760146
FSTL1 follistatin-like 1 -0.0703004
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0660285
NAV1 neuron navigator 1 -0.0650456
LOX lysyl oxidase -0.0624908
COL8A1 collagen, type VIII, alpha 1 -0.0622873
POTEF POTE ankyrin domain family, member F -0.0614528
MACF1 microtubule-actin crosslinking factor 1 -0.060983
SP100 SP100 nuclear antigen -0.0605581
PRSS23 protease, serine, 23 -0.0597609
LDHA lactate dehydrogenase A -0.0596485
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0587058
COL5A2 collagen, type V, alpha 2 -0.0586825
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0584902
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0577122
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0565062
ASPH aspartate beta-hydroxylase -0.0544328
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0542328
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0535002
MX2 MX dynamin-like GTPase 2 -0.0521167
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0513105
DCLK2 doublecortin-like kinase 2 -0.0488308
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0485125
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0479906
DST dystonin -0.0472303
TAGLN2 transgelin 2 -0.0469721
EGFR epidermal growth factor receptor -0.0465207
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0463678
EFNA5 ephrin-A5 -0.0459029
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0456361
PKM pyruvate kinase, muscle -0.045217
MYOF myoferlin -0.044751
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.044249
SORBS2 sorbin and SH3 domain containing 2 -0.0433714
FNDC3A fibronectin type III domain containing 3A -0.0430314
MBNL1 muscleblind-like splicing regulator 1 -0.0425248
LMNA lamin A/C -0.0418544
IFI16 interferon, gamma-inducible protein 16 -0.0405483
ANKRD11 ankyrin repeat domain 11 -0.0393104
IL7R interleukin 7 receptor -0.0390421
OASL 2'-5'-oligoadenylate synthetase-like -0.0386928
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0385975
RUNX1 runt-related transcription factor 1 -0.0380046
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0376989
TPM4 tropomyosin 4 -0.0370804
SQSTM1 sequestosome 1 -0.0368967
TENM3 teneurin transmembrane protein 3 -0.03689
PLXNA2 plexin A2 -0.0367565
PDE4D phosphodiesterase 4D, cAMP-specific -0.0359273
SH3KBP1 SH3-domain kinase binding protein 1 -0.0358811
FLNA filamin A, alpha -0.0351762
SLC39A11 solute carrier family 39, member 11 -0.0349306
RNF213 ring finger protein 213 -0.0346624
CUX1 cut-like homeobox 1 -0.0342913
SEPTIN7 septin 7 -0.0341381
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 -0.0337783
JUN jun proto-oncogene -0.0337592
ANXA2 annexin A2 -0.0336583
PCDH7 protocadherin 7 -0.033415
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0332567
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.0330293
IFIH1 interferon induced with helicase C domain 1 -0.032966
SDK1 sidekick cell adhesion molecule 1 -0.0329176
TMSB10 thymosin beta 10 -0.0328098
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0325681
TMSB4X thymosin beta 4, X-linked -0.032458
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0320087
PRELID2 PRELI domain containing 2 -0.0318976
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 -0.0317421
LRRC17 leucine rich repeat containing 17 -0.0307541
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.030473
CALR calreticulin -0.0302292
SUCNR1 succinate receptor 1 -0.0299206
EXT1 exostosin glycosyltransferase 1 -0.0290458
RRBP1 ribosome binding protein 1 -0.0289031
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0288005
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.028792
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0287503
COL4A2 collagen, type IV, alpha 2 -0.0287474
LDLRAD4 low density lipoprotein receptor class A domain containing 4 -0.0283735