Temsirolimus_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Temsirolimus perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Temsirolimus_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TLE4 transducin-like enhancer of split 4 0.0660566
LPIN1 lipin 1 0.0591927
ZSWIM6 zinc finger, SWIM-type containing 6 0.058945
VCL vinculin 0.0516703
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0350545
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0341317
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0327114
HSPA1B heat shock 70kDa protein 1B 0.032467
NRIP1 nuclear receptor interacting protein 1 0.0319009
MED13 mediator complex subunit 13 0.0305772
HOMER1 homer scaffolding protein 1 0.0294204
INTS6 integrator complex subunit 6 0.0285671
RIGI RNA sensor RIG-I 0.0278677
PTPRK protein tyrosine phosphatase, receptor type, K 0.0273433
TENT5A terminal nucleotidyltransferase 5A 0.0267056
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0261692
KAT6A K(lysine) acetyltransferase 6A 0.0261432
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0254422
RNF213 ring finger protein 213 0.0254222
NCOR2 nuclear receptor corepressor 2 0.0253094
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0250303
PARD3 par-3 family cell polarity regulator 0.025019
ACTN1 actinin, alpha 1 0.0245937
VMP1 vacuole membrane protein 1 0.0244689
KDM4C lysine (K)-specific demethylase 4C 0.0240684
CTBP2 C-terminal binding protein 2 0.0237935
SEPTIN9 septin 9 0.0237816
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0236501
RBM33 RNA binding motif protein 33 0.0233824
RC3H1 ring finger and CCCH-type domains 1 0.0229311
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0228389
PSD3 pleckstrin and Sec7 domain containing 3 0.0228137
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.022466
CHD6 chromodomain helicase DNA binding protein 6 0.0220163
EGFR epidermal growth factor receptor 0.0219133
GOLGB1 golgin B1 0.0219081
HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 0.0218698
MYH9 myosin, heavy chain 9, non-muscle 0.0216511
FAM13B family with sequence similarity 13, member B 0.0216143
TRA2A transformer 2 alpha homolog (Drosophila) 0.0213723
DUSP10 dual specificity phosphatase 10 0.0209692
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.020956
GLCCI1 glucocorticoid induced 1 0.0208302
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0207998
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.020732
AUTS2 autism susceptibility candidate 2 0.0203989
EHMT1 euchromatic histone-lysine N-methyltransferase 1 0.02035
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0200957
USP34 ubiquitin specific peptidase 34 0.0199196
CHD9 chromodomain helicase DNA binding protein 9 0.0198834
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0198687
MYO1E myosin IE 0.0198461
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0198453
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0196634
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0195485
ZNF644 zinc finger protein 644 0.0194907
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0194423
SMAD3 SMAD family member 3 0.0192088
EPG5 ectopic P-granules autophagy protein 5 homolog (C. elegans) 0.0191573
GLG1 golgi glycoprotein 1 0.0191004
EP300 E1A binding protein p300 0.0190577
KCNT2 potassium channel, sodium activated subfamily T, member 2 0.0190094
PALLD palladin, cytoskeletal associated protein 0.0185311
MED13L mediator complex subunit 13-like 0.0185228
RASAL2 RAS protein activator like 2 0.0185197
KIF21A kinesin family member 21A 0.0184822
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.018272
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 0.0181672
BCL2L13 BCL2-like 13 (apoptosis facilitator) 0.0181296
ATXN1 ataxin 1 0.0180979
IARS1 isoleucyl-tRNA synthetase 1 0.017917
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0178904
PRKCA protein kinase C, alpha 0.0177161
RBM25 RNA binding motif protein 25 0.0176953
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0176479
STXBP4 syntaxin binding protein 4 0.0175534
WDFY3 WD repeat and FYVE domain containing 3 0.017527
RBM26 RNA binding motif protein 26 0.0174824
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.0173831
EIF4B eukaryotic translation initiation factor 4B 0.01737
MBD5 methyl-CpG binding domain protein 5 0.0173616
SHB Src homology 2 domain containing adaptor protein B 0.0173601
TIMP2 TIMP metallopeptidase inhibitor 2 0.0173089
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0172433
ARL15 ADP-ribosylation factor-like 15 0.0170421
NPAS2 neuronal PAS domain protein 2 0.016988
CEP350 centrosomal protein 350kDa 0.0169057
EP400 E1A binding protein p400 0.0168911
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.016858
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.0165902
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0165267
FLNA filamin A, alpha 0.0165186
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0164768
OXSR1 oxidative stress responsive 1 0.0162838
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.0162418
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0162043
PI4KB phosphatidylinositol 4-kinase, catalytic, beta 0.0161726
EXT1 exostosin glycosyltransferase 1 0.0160995
USP36 ubiquitin specific peptidase 36 0.0160891
PICALM phosphatidylinositol binding clathrin assembly protein 0.0160789

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.255055
IGF2 insulin-like growth factor 2 -0.177343
VIM vimentin -0.118183
LSAMP limbic system-associated membrane protein -0.116345
PTMA prothymosin, alpha -0.11115
AKAP12 A kinase (PRKA) anchor protein 12 -0.105387
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0963604
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0958248
NALF1 NALCN channel auxiliary factor 1 -0.0932965
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0837811
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0755645
FAM13A family with sequence similarity 13, member A -0.0738104
RPS6 ribosomal protein S6 -0.0677677
NDRG1 N-myc downstream regulated 1 -0.0586636
NAMPT nicotinamide phosphoribosyltransferase -0.0578566
RPS24 ribosomal protein S24 -0.057731
MEIS2 Meis homeobox 2 -0.0547071
TPT1 tumor protein, translationally-controlled 1 -0.054247
RPL35A ribosomal protein L35a -0.0517349
MAP1B microtubule-associated protein 1B -0.0516193
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0508695
MEF2A myocyte enhancer factor 2A -0.0493585
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0486516
FMN1 formin 1 -0.0484372
CSDE1 cold shock domain containing E1, RNA-binding -0.0475691
DTNA dystrobrevin, alpha -0.0474769
SYT1 synaptotagmin I -0.044437
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0442599
B2M beta-2-microglobulin -0.0439167
RPL23 ribosomal protein L23 -0.0438629
COL1A1 collagen, type I, alpha 1 -0.043408
HELZ helicase with zinc finger -0.0431198
RPS8 ribosomal protein S8 -0.0406692
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0403665
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0400658
PDIA3 protein disulfide isomerase family A, member 3 -0.0398034
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0397997
RPL19 ribosomal protein L19 -0.0391794
RPLP1 ribosomal protein, large, P1 -0.0389057
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0383857
CADM2 cell adhesion molecule 2 -0.0371748
RPS3 ribosomal protein S3 -0.0371019
CRH corticotropin releasing hormone -0.0369962
ENO1 enolase 1, (alpha) -0.0368094
RPL12 ribosomal protein L12 -0.0355433
RPS12 ribosomal protein S12 -0.0349787
FAM162A family with sequence similarity 162, member A -0.0349729
RPLP0 ribosomal protein, large, P0 -0.0342733
IER3 immediate early response 3 -0.0341342
RPL31 ribosomal protein L31 -0.0341237
RPS19 ribosomal protein S19 -0.0338673
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0338545
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0337352
PGK1 phosphoglycerate kinase 1 -0.0335944
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0335232
ZBTB20 zinc finger and BTB domain containing 20 -0.0334863
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0325365
SLITRK6 SLIT and NTRK-like family, member 6 -0.0322474
WDR45B WD repeat domain 45B -0.0317146
SETD5 SET domain containing 5 -0.031639
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0316221
RPL34 ribosomal protein L34 -0.0314529
EIF1 eukaryotic translation initiation factor 1 -0.0314107
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0312924
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.031071
TRIB2 tribbles pseudokinase 2 -0.031019
HAND2 heart and neural crest derivatives expressed 2 -0.0308656
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0307947
NCAM2 neural cell adhesion molecule 2 -0.0306218
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0302832
RPS2 ribosomal protein S2 -0.0298117
GNAS GNAS complex locus -0.0297355
DDIT4 DNA-damage-inducible transcript 4 -0.029654
KDM5B lysine (K)-specific demethylase 5B -0.0293301
FTL ferritin, light polypeptide -0.0289969
IGFBP3 insulin-like growth factor binding protein 3 -0.0287952
DNAH14 dynein, axonemal, heavy chain 14 -0.0283319
RPL36 ribosomal protein L36 -0.028155
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0278475
RPS5 ribosomal protein S5 -0.0276514
SOS1 son of sevenless homolog 1 (Drosophila) -0.0275929
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0270327
FNBP1 formin binding protein 1 -0.0269893
DCAF7 DDB1 and CUL4 associated factor 7 -0.0269335
RPL32 ribosomal protein L32 -0.0267969
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0265524
CALD1 caldesmon 1 -0.0262498
SCAF11 SR-related CTD-associated factor 11 -0.026048
SET SET nuclear proto-oncogene -0.0259898
C1ORF21 chromosome 1 open reading frame 21 -0.0255938
COL4A5 collagen, type IV, alpha 5 -0.0253274
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0253216
NUP58 nucleoporin 58 -0.0246886
RPS27A ribosomal protein S27a -0.0246799
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0242434
RPL26 ribosomal protein L26 -0.0241313
KMT2C lysine (K)-specific methyltransferase 2C -0.0241005
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0239561
ANGPT1 angiopoietin 1 -0.0236136
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0234747