Temsirolimus_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Temsirolimus perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Temsirolimus_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZCCHC7 zinc finger, CCHC domain containing 7 0.0942904
MCL1 myeloid cell leukemia 1 0.0609347
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0577136
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0562102
GRAMD1B GRAM domain containing 1B 0.0554812
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0531366
POTEF POTE ankyrin domain family, member F 0.0504303
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0503824
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.049225
VCL vinculin 0.0471488
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0464346
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0450975
PDE10A phosphodiesterase 10A 0.0444085
ATXN1 ataxin 1 0.0429176
PDLIM5 PDZ and LIM domain 5 0.0414375
MYH9 myosin, heavy chain 9, non-muscle 0.0413878
COPA coatomer protein complex, subunit alpha 0.0406605
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0403868
RPL3 ribosomal protein L3 0.0393493
CAMTA1 calmodulin binding transcription activator 1 0.0384813
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0383848
INTS6 integrator complex subunit 6 0.037522
SND1 staphylococcal nuclease and tudor domain containing 1 0.0374878
DOCK5 dedicator of cytokinesis 5 0.0371299
USP34 ubiquitin specific peptidase 34 0.0370759
AEBP2 AE binding protein 2 0.0362965
PRELID2 PRELI domain containing 2 0.0359913
THSD4 thrombospondin, type I, domain containing 4 0.035963
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0353687
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0349503
WWOX WW domain containing oxidoreductase 0.0336086
FNIP1 folliculin interacting protein 1 0.0330646
WNK1 WNK lysine deficient protein kinase 1 0.0327489
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0325935
PRH1 proline-rich protein HaeIII subfamily 1 0.0321797
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0319266
PDIA6 protein disulfide isomerase family A, member 6 0.0318611
YAP1 Yes-associated protein 1 0.030705
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0298633
ZNF644 zinc finger protein 644 0.0294977
SETD5 SET domain containing 5 0.0287272
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0282328
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0277654
PCBP2 poly(rC) binding protein 2 0.0275692
ZSWIM6 zinc finger, SWIM-type containing 6 0.0271686
TRIO trio Rho guanine nucleotide exchange factor 0.02711
N4BP2L2 NEDD4 binding protein 2-like 2 0.0269101
HOMER1 homer scaffolding protein 1 0.0268443
WNT2B wingless-type MMTV integration site family, member 2B 0.0267058
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) 0.0265648
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0261776
SFPQ splicing factor proline/glutamine-rich 0.0258323
GSK3B glycogen synthase kinase 3 beta 0.0255693
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0255209
ZNF207 zinc finger protein 207 0.0254277
PYGL phosphorylase, glycogen, liver 0.0252757
SETX senataxin 0.0251058
TPM2 tropomyosin 2 (beta) 0.0248293
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0247743
EPAS1 endothelial PAS domain protein 1 0.0246093
CPNE1 copine I 0.0245411
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0243968
CCNL1 cyclin L1 0.0243139
HYOU1 hypoxia up-regulated 1 0.0242656
PDE4D phosphodiesterase 4D, cAMP-specific 0.0238226
ZNF407 zinc finger protein 407 0.0233988
NBAS neuroblastoma amplified sequence 0.0231645
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0231086
ARMH4 armadillo like helical domain containing 4 0.0228896
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0227957
TRIM59 tripartite motif containing 59 0.0226754
EXOC4 exocyst complex component 4 0.0225947
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0224635
ZNF638 zinc finger protein 638 0.0222454
SNAP25 synaptosomal-associated protein, 25kDa 0.0221179
SMAD3 SMAD family member 3 0.0219041
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0216329
CMIP c-Maf inducing protein 0.0215831
C6ORF62 chromosome 6 open reading frame 62 0.0215078
JMJD1C jumonji domain containing 1C 0.0214172
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0212903
CAMKMT calmodulin-lysine N-methyltransferase 0.0210993
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0210587
ARB2A ARB2 cotranscriptional regulator A 0.020815
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0205373
TTC17 tetratricopeptide repeat domain 17 0.0204841
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0204202
ACTN1 actinin, alpha 1 0.0203006
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0198647
EIF4B eukaryotic translation initiation factor 4B 0.0197797
MED13L mediator complex subunit 13-like 0.0196419
GOSR2 golgi SNAP receptor complex member 2 0.0196279
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0196123
ETNK1 ethanolamine kinase 1 0.019488
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0194771
SVIL supervillin 0.019347
FNDC3B fibronectin type III domain containing 3B 0.0192775
RAB7A RAB7A, member RAS oncogene family 0.0192213
TAS2R14 taste receptor, type 2, member 14 0.0191384
RYR3 ryanodine receptor 3 0.0190992

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.184347
TFPI2 tissue factor pathway inhibitor 2 -0.165049
AKAP12 A kinase (PRKA) anchor protein 12 -0.129246
PTMA prothymosin, alpha -0.0891272
VIM vimentin -0.0827749
TMSB10 thymosin beta 10 -0.0779425
RPS8 ribosomal protein S8 -0.0768979
RPL12 ribosomal protein L12 -0.0747525
RPL37A ribosomal protein L37a -0.0728207
RPL26 ribosomal protein L26 -0.0688139
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.064182
RPLP1 ribosomal protein, large, P1 -0.0637356
RPS3 ribosomal protein S3 -0.0633725
MT2A metallothionein 2A -0.0632615
CAVIN1 caveolae associated protein 1 -0.0620054
TPT1 tumor protein, translationally-controlled 1 -0.0619313
RPL37 ribosomal protein L37 -0.0616475
NAP1L1 nucleosome assembly protein 1-like 1 -0.0600748
MYL12B myosin, light chain 12B, regulatory -0.0594693
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0590415
STC1 stanniocalcin 1 -0.057082
RPL31 ribosomal protein L31 -0.0551579
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0551442
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0547121
WSB1 WD repeat and SOCS box containing 1 -0.053966
IER3 immediate early response 3 -0.0531949
YBX3 Y box binding protein 3 -0.0522329
KDM3A lysine (K)-specific demethylase 3A -0.0507328
RPL11 ribosomal protein L11 -0.0505911
SEPTIN7 septin 7 -0.0498848
RPS27 ribosomal protein S27 -0.0492457
RPL9 ribosomal protein L9 -0.0491351
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0479308
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.047309
RPL38 ribosomal protein L38 -0.0461755
RPL35A ribosomal protein L35a -0.0459872
RPS29 ribosomal protein S29 -0.0450323
RACK1 receptor for activated C kinase 1 -0.0442938
PGK1 phosphoglycerate kinase 1 -0.0442334
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.043353
FTL ferritin, light polypeptide -0.0426249
EIF5B eukaryotic translation initiation factor 5B -0.0424438
RPL34 ribosomal protein L34 -0.0414269
RTN4 reticulon 4 -0.0412925
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0409339
TM4SF1 transmembrane 4 L six family member 1 -0.0399679
RPLP0 ribosomal protein, large, P0 -0.0393753
NACA nascent polypeptide-associated complex alpha subunit -0.0385476
ACTG1 actin gamma 1 -0.0374121
RPL5 ribosomal protein L5 -0.0366985
VDAC1 voltage-dependent anion channel 1 -0.036127
RPS27A ribosomal protein S27a -0.0354404
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0353154
RPL19 ribosomal protein L19 -0.0351963
RPL36 ribosomal protein L36 -0.0340208
LOC112694756 uncharaterized LOC112694756 -0.0336339
BZW1 basic leucine zipper and W2 domains 1 -0.0335333
KPNB1 karyopherin (importin) beta 1 -0.0334836
NIPBL Nipped-B homolog (Drosophila) -0.0334428
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0333282
PRRC2C proline-rich coiled-coil 2C -0.032911
TPI1 triosephosphate isomerase 1 -0.0320989
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0315225
RPS10 ribosomal protein S10 -0.0314864
STAT1 signal transducer and activator of transcription 1, 91kDa -0.03125
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0310205
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0309429
S100A11 S100 calcium binding protein A11 -0.0305474
RPS15 ribosomal protein S15 -0.0301097
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0298891
SRP72 signal recognition particle 72kDa -0.0296583
RPS12 ribosomal protein S12 -0.0295326
RPLP2 ribosomal protein, large, P2 -0.0293039
NAMPT nicotinamide phosphoribosyltransferase -0.0292356
EIF1 eukaryotic translation initiation factor 1 -0.0292025
LMAN1 lectin, mannose-binding, 1 -0.029191
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0291794
S100A6 S100 calcium binding protein A6 -0.0290983
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0290552
STK4 serine/threonine kinase 4 -0.0289674
UBB ubiquitin B -0.0289479
ZFR zinc finger RNA binding protein -0.0287006
TPM4 tropomyosin 4 -0.0284659
RPL23 ribosomal protein L23 -0.0282157
EPN2 epsin 2 -0.0281231
RPL8 ribosomal protein L8 -0.0278821
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0278146
CHD4 chromodomain helicase DNA binding protein 4 -0.0276417
PTPRF protein tyrosine phosphatase, receptor type, F -0.0275979
RPL35 ribosomal protein L35 -0.0273236
GCC2 GRIP and coiled-coil domain containing 2 -0.0272014
RPS19 ribosomal protein S19 -0.0270718
RPS2 ribosomal protein S2 -0.0269536
GNAS GNAS complex locus -0.0263347
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0263001
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0260195
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0260101
KIF5B kinesin family member 5B -0.0259965
ZMYND8 zinc finger, MYND-type containing 8 -0.0257852
RPS25 ribosomal protein S25 -0.0257416