Temsirolimus_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Temsirolimus perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Temsirolimus_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0699746
NAV2 neuron navigator 2 0.0698434
SPAG9 sperm associated antigen 9 0.060308
TRIO trio Rho guanine nucleotide exchange factor 0.0489587
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0405909
FN1 fibronectin 1 0.0394081
TSC22D2 TSC22 domain family, member 2 0.0380759
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0348318
MYH9 myosin, heavy chain 9, non-muscle 0.0319047
HELZ helicase with zinc finger 0.0293455
RPL3 ribosomal protein L3 0.0255339
ESYT2 extended synaptotagmin-like protein 2 0.0229478
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 0.0226636
BACE2 beta-site APP-cleaving enzyme 2 0.0215074
DUSP10 dual specificity phosphatase 10 0.0210831
OGA O-GlcNAcase 0.0206408
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0202158
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0194404
GOLGA4 golgin A4 0.0193353
FLNA filamin A, alpha 0.019224
NEK7 NIMA-related kinase 7 0.01867
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0185165
USP9X ubiquitin specific peptidase 9, X-linked 0.0183728
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0183076
CEP250 centrosomal protein 250kDa 0.0180889
EPS8 epidermal growth factor receptor pathway substrate 8 0.0180597
KYNU kynureninase 0.0178097
NT5C2 5'-nucleotidase, cytosolic II 0.0176999
WTAP Wilms tumor 1 associated protein 0.0176443
TXNRD1 thioredoxin reductase 1 0.0175889
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.017579
ZBTB38 zinc finger and BTB domain containing 38 0.0174146
HBS1L HBS1-like translational GTPase 0.0174142
HDAC9 histone deacetylase 9 0.0170964
NCKAP1 NCK-associated protein 1 0.0170798
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0169456
BHLHE40 basic helix-loop-helix family, member e40 0.0169054
UGCG UDP-glucose ceramide glucosyltransferase 0.016802
PTPRJ protein tyrosine phosphatase, receptor type, J 0.016743
NRIP1 nuclear receptor interacting protein 1 0.0162819
USP37 ubiquitin specific peptidase 37 0.0162718
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0162633
CLTC clathrin, heavy chain (Hc) 0.0162544
NUP153 nucleoporin 153kDa 0.0158463
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0155946
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0150894
FBXL7 F-box and leucine-rich repeat protein 7 0.0149535
MYOF myoferlin 0.0148737
AHR aryl hydrocarbon receptor 0.0146702
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0146564
ANLN anillin, actin binding protein 0.0146146
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0146112
FMNL2 formin-like 2 0.014584
ZFAND3 zinc finger, AN1-type domain 3 0.0144093
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0143829
TRA2A transformer 2 alpha homolog (Drosophila) 0.0142986
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0142588
KDM6A lysine (K)-specific demethylase 6A 0.0141377
CKAP5 cytoskeleton associated protein 5 0.0139415
CENPF centromere protein F, 350/400kDa 0.0139383
ADAM17 ADAM metallopeptidase domain 17 0.0139191
JMJD1C jumonji domain containing 1C 0.0138498
CCDC93 coiled-coil domain containing 93 0.0137247
YBX1 Y box binding protein 1 0.0136811
SRP54 signal recognition particle 54kDa 0.0136252
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0135549
ARRDC3 arrestin domain containing 3 0.0135236
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0134471
FNDC3B fibronectin type III domain containing 3B 0.0134184
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0132202
ZNF451 zinc finger protein 451 0.0132188
UBE2O ubiquitin-conjugating enzyme E2O 0.0131531
YEATS2 YEATS domain containing 2 0.0131321
TJP2 tight junction protein 2 0.0130728
PLEC plectin 0.0130646
SLC25A26 solute carrier family 25 (S-adenosylmethionine carrier), member 26 0.0130437
IARS1 isoleucyl-tRNA synthetase 1 0.012903
ABI1 abl-interactor 1 0.0127682
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0127515
EEF2 eukaryotic translation elongation factor 2 0.0126564
HOOK2 hook microtubule-tethering protein 2 0.0125761
GARS1 glycyl-tRNA synthetase 1 0.0125745
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0125587
XPO1 exportin 1 0.0125354
BLTP1 bridge-like lipid transfer protein family member 1 0.0124467
SH3BP4 SH3-domain binding protein 4 0.0124363
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.0124262
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 0.012413
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0122884
USP36 ubiquitin specific peptidase 36 0.0122841
ECPAS Ecm29 proteasome adaptor and scaffold 0.0122233
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0122007
HIPK2 homeodomain interacting protein kinase 2 0.0121561
GLS2 glutaminase 2 (liver, mitochondrial) 0.0121442
SEC23A Sec23 homolog A (S. cerevisiae) 0.012072
UVRAG UV radiation resistance associated 0.0120403
CUL3 cullin 3 0.0120221
HLA-C major histocompatibility complex, class I, C 0.0120163
PPP1R10 protein phosphatase 1, regulatory subunit 10 0.0120096
AFF1 AF4/FMR2 family, member 1 0.0120042

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.334287
CD44 CD44 molecule (Indian blood group) -0.136071
GLIS3 GLIS family zinc finger 3 -0.133982
VCL vinculin -0.119438
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.119078
FRMD4A FERM domain containing 4A -0.114885
HLA-B major histocompatibility complex, class I, B -0.113288
FTL ferritin, light polypeptide -0.110588
LDHA lactate dehydrogenase A -0.108706
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0984352
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0924262
EGR1 early growth response 1 -0.0803835
ENO1 enolase 1, (alpha) -0.080379
IER3 immediate early response 3 -0.0801628
IGFBP3 insulin-like growth factor binding protein 3 -0.0755922
EXT1 exostosin glycosyltransferase 1 -0.0755109
TPT1 tumor protein, translationally-controlled 1 -0.0733001
BICC1 BicC family RNA binding protein 1 -0.0666742
ZMYND8 zinc finger, MYND-type containing 8 -0.0665171
B2M beta-2-microglobulin -0.0659303
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0633106
HLA-A major histocompatibility complex, class I, A -0.0627574
TMSB10 thymosin beta 10 -0.062743
NDRG1 N-myc downstream regulated 1 -0.0609966
TPM4 tropomyosin 4 -0.0594223
PGK1 phosphoglycerate kinase 1 -0.0592905
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0587068
RPS3 ribosomal protein S3 -0.0569179
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0563576
PLIN2 perilipin 2 -0.0556526
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0534422
PTMA prothymosin, alpha -0.0532249
HLA-E major histocompatibility complex, class I, E -0.0531995
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0526558
GPC6 glypican 6 -0.0514766
RPS12 ribosomal protein S12 -0.0489502
RPL37A ribosomal protein L37a -0.0482623
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.047639
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0475788
VCAN versican -0.0471378
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0454319
IFITM3 interferon induced transmembrane protein 3 -0.0447694
MT2A metallothionein 2A -0.0446681
IFI6 interferon, alpha-inducible protein 6 -0.0436844
CTSB cathepsin B -0.0434423
IFI16 interferon, gamma-inducible protein 16 -0.0430299
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0430245
BTG1 B-cell translocation gene 1, anti-proliferative -0.0429363
SLC38A1 solute carrier family 38, member 1 -0.0420862
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0420109
COL6A3 collagen, type VI, alpha 3 -0.0417263
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0414061
BASP1 brain abundant, membrane attached signal protein 1 -0.040762
NAV1 neuron navigator 1 -0.0397352
CTSD cathepsin D -0.0392386
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0388716
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0388222
DIAPH2 diaphanous-related formin 2 -0.0383871
ARL4C ADP-ribosylation factor-like 4C -0.0377319
RPL9 ribosomal protein L9 -0.0374842
HMGA2 high mobility group AT-hook 2 -0.0369786
PDE10A phosphodiesterase 10A -0.0369062
RAI14 retinoic acid induced 14 -0.0364891
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0364692
C3 complement component 3 -0.0361394
IGFBP7 insulin-like growth factor binding protein 7 -0.0354312
NAMPT nicotinamide phosphoribosyltransferase -0.0343029
RPL36A ribosomal protein L36a -0.0339543
SOX5 SRY (sex determining region Y)-box 5 -0.033626
ENO2 enolase 2 (gamma, neuronal) -0.0334979
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0333231
VMP1 vacuole membrane protein 1 -0.0331645
ANKRD12 ankyrin repeat domain 12 -0.0331201
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0330133
RPS6 ribosomal protein S6 -0.0329686
PALLD palladin, cytoskeletal associated protein -0.0323022
OSMR oncostatin M receptor -0.032268
STC1 stanniocalcin 1 -0.0315041
ADM adrenomedullin -0.0313843
SOD2 superoxide dismutase 2, mitochondrial -0.0307895
UBC ubiquitin C -0.0306847
EGFR epidermal growth factor receptor -0.0299351
RPS8 ribosomal protein S8 -0.0298365
EIF1 eukaryotic translation initiation factor 1 -0.0297497
KRT19 keratin 19, type I -0.0296021
NABP1 nucleic acid binding protein 1 -0.0295342
RPS27A ribosomal protein S27a -0.029522
CDH13 cadherin 13 -0.0292626
JUN jun proto-oncogene -0.0289914
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0289243
IER2 immediate early response 2 -0.0283962
COL1A1 collagen, type I, alpha 1 -0.0283189
THBS1 thrombospondin 1 -0.0281996
ANXA2 annexin A2 -0.0279614
TPM1 tropomyosin 1 (alpha) -0.027815
RTN4 reticulon 4 -0.0274338
GNAS GNAS complex locus -0.0268189
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.026558
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0261636
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0256732