Temsirolimus_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Temsirolimus perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Temsirolimus_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.090985
SOD2 superoxide dismutase 2, mitochondrial 0.0858924
IL6 interleukin 6 0.0756451
FNDC3B fibronectin type III domain containing 3B 0.0735579
CXCL8 chemokine (C-X-C motif) ligand 8 0.0699402
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0679526
EGFR epidermal growth factor receptor 0.0640704
IGFBP3 insulin-like growth factor binding protein 3 0.0573007
FNIP1 folliculin interacting protein 1 0.0550196
COL5A1 collagen, type V, alpha 1 0.0516011
VEGFA vascular endothelial growth factor A 0.0476614
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0432483
ZCCHC7 zinc finger, CCHC domain containing 7 0.039997
ZNF638 zinc finger protein 638 0.0388555
KYNU kynureninase 0.0379075
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0378668
PLEC plectin 0.0374888
PRELID2 PRELI domain containing 2 0.0373892
NCOR2 nuclear receptor corepressor 2 0.0369175
ZSWIM6 zinc finger, SWIM-type containing 6 0.0368504
MSN moesin 0.0362877
VEGFC vascular endothelial growth factor C 0.0359637
NRXN3 neurexin 3 0.0355727
SAMD4A sterile alpha motif domain containing 4A 0.0346112
RUNX1 runt-related transcription factor 1 0.0336427
CDH13 cadherin 13 0.0332092
TNS3 tensin 3 0.0326338
NBAS neuroblastoma amplified sequence 0.0323973
TTC3 tetratricopeptide repeat domain 3 0.0323665
LPP LIM domain containing preferred translocation partner in lipoma 0.0314591
FN1 fibronectin 1 0.0313456
STC2 stanniocalcin 2 0.0306836
NAV2 neuron navigator 2 0.0305076
POTEF POTE ankyrin domain family, member F 0.0304283
DST dystonin 0.030291
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0292669
CSNK1A1 casein kinase 1, alpha 1 0.0288452
SDK1 sidekick cell adhesion molecule 1 0.0281155
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0279559
GRB10 growth factor receptor-bound protein 10 0.0275977
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.0273124
ATXN1 ataxin 1 0.0271908
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0266565
INSIG2 insulin induced gene 2 0.0266519
HYOU1 hypoxia up-regulated 1 0.0255094
FBXL7 F-box and leucine-rich repeat protein 7 0.0254664
BRD2 bromodomain containing 2 0.0254436
CALR calreticulin 0.0253321
TPST1 tyrosylprotein sulfotransferase 1 0.0248295
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0247815
FLNA filamin A, alpha 0.0247238
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0244467
IGF2 insulin-like growth factor 2 0.0243729
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0243266
INTS6 integrator complex subunit 6 0.0239144
ABLIM3 actin binding LIM protein family, member 3 0.0238851
RNF145 ring finger protein 145 0.0238227
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0234952
GSE1 Gse1 coiled-coil protein 0.0233387
CYLD cylindromatosis (turban tumor syndrome) 0.0233179
TGFB1 transforming growth factor, beta 1 0.0233101
NFE2L1 nuclear factor, erythroid 2-like 1 0.0232944
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.023194
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0230887
FER fer (fps/fes related) tyrosine kinase 0.023024
TNIP1 TNFAIP3 interacting protein 1 0.0229701
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.022618
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0225593
SCFD1 sec1 family domain containing 1 0.0223421
SENP6 SUMO1/sentrin specific peptidase 6 0.0220886
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0219338
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0219305
KDM7A lysine (K)-specific demethylase 7A 0.0218769
LRRC8C leucine rich repeat containing 8 family, member C 0.0217175
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 0.0213094
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0211938
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 0.0210921
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0210678
F3 coagulation factor III (thromboplastin, tissue factor) 0.0210061
DPYD dihydropyrimidine dehydrogenase 0.0209088
NOTCH2 notch 2 0.0208313
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0207671
N4BP2L2 NEDD4 binding protein 2-like 2 0.0207604
RND3 Rho family GTPase 3 0.020759
KDM3B lysine (K)-specific demethylase 3B 0.0207552
HDAC9 histone deacetylase 9 0.0206277
FAM219A family with sequence similarity 219, member A 0.0205753
BIRC3 baculoviral IAP repeat containing 3 0.0202954
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0202373
IRAK2 interleukin-1 receptor-associated kinase 2 0.0202173
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0201882
YAP1 Yes-associated protein 1 0.0200827
ITCH itchy E3 ubiquitin protein ligase 0.0198495
MAGT1 magnesium transporter 1 0.0198082
SH3GL1 SH3-domain GRB2-like 1 0.0197991
ARB2A ARB2 cotranscriptional regulator A 0.0196783
FAM13B family with sequence similarity 13, member B 0.0195344
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.019478
LSAMP limbic system-associated membrane protein 0.0193843
MMP12 matrix metallopeptidase 12 0.0192138

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.361822
MT2A metallothionein 2A -0.224734
TMSB10 thymosin beta 10 -0.157207
VIM vimentin -0.148208
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.123783
HLA-B major histocompatibility complex, class I, B -0.0930915
COL6A3 collagen, type VI, alpha 3 -0.0898419
LOX lysyl oxidase -0.0808875
PTMA prothymosin, alpha -0.0779882
ANXA2 annexin A2 -0.0776275
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0767669
COL1A2 collagen, type I, alpha 2 -0.0755848
B2M beta-2-microglobulin -0.072498
MT1X metallothionein 1X -0.0626584
LOXL2 lysyl oxidase-like 2 -0.0608964
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0567481
COL1A1 collagen, type I, alpha 1 -0.0561368
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0518843
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0514448
NDRG1 N-myc downstream regulated 1 -0.0489493
H3-3B H3.3 histone B -0.0483013
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0470048
IGFBP7 insulin-like growth factor binding protein 7 -0.0457286
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0452777
PRSS23 protease, serine, 23 -0.044298
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0420758
STC1 stanniocalcin 1 -0.0414703
FTL ferritin, light polypeptide -0.0406928
AKAP12 A kinase (PRKA) anchor protein 12 -0.038289
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.037325
ZNF292 zinc finger protein 292 -0.0371324
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0366381
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0365144
S100A10 S100 calcium binding protein A10 -0.0360513
SMAD3 SMAD family member 3 -0.0359355
FKBP10 FK506 binding protein 10, 65 kDa -0.0357234
OGA O-GlcNAcase -0.0356974
AHNAK AHNAK nucleoprotein -0.0354797
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0343609
HLA-C major histocompatibility complex, class I, C -0.034309
RPL34 ribosomal protein L34 -0.0340596
GNAS GNAS complex locus -0.0339366
CAV1 caveolin 1, caveolae protein, 22kDa -0.0339249
NRP1 neuropilin 1 -0.0334432
RNF24 ring finger protein 24 -0.0332432
UBE2H ubiquitin-conjugating enzyme E2H -0.032566
TMSB4X thymosin beta 4, X-linked -0.0325574
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0322133
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0321285
SFTPA2 surfactant protein A2 -0.0313809
LOC112694756 uncharaterized LOC112694756 -0.0303848
TAGLN2 transgelin 2 -0.0300463
MARCKS myristoylated alanine-rich protein kinase C substrate -0.029916
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0295646
RBM25 RNA binding motif protein 25 -0.0295241
RPLP1 ribosomal protein, large, P1 -0.0293706
S100A9 S100 calcium binding protein A9 -0.0290191
ELL2 elongation factor, RNA polymerase II, 2 -0.0286719
RPL35A ribosomal protein L35a -0.0285646
RPL37 ribosomal protein L37 -0.028206
RPL23 ribosomal protein L23 -0.0281667
ENO1 enolase 1, (alpha) -0.0278722
CD44 CD44 molecule (Indian blood group) -0.0278046
EFNA5 ephrin-A5 -0.0275287
RPL31 ribosomal protein L31 -0.0271419
EIF1 eukaryotic translation initiation factor 1 -0.0268716
ASPH aspartate beta-hydroxylase -0.0267145
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0266899
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0263534
HLA-A major histocompatibility complex, class I, A -0.026213
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0262126
RPS24 ribosomal protein S24 -0.0261249
RLF rearranged L-myc fusion -0.0261127
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0257908
MAP1B microtubule-associated protein 1B -0.0257374
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0253667
COG5 component of oligomeric golgi complex 5 -0.0253395
CTSB cathepsin B -0.0251559
AKAP9 A kinase (PRKA) anchor protein 9 -0.0251242
PCCA propionyl CoA carboxylase, alpha polypeptide -0.0243763
CALU calumenin -0.024189
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.024105
ANKRD12 ankyrin repeat domain 12 -0.0239648
LDHA lactate dehydrogenase A -0.0239076
RPS13 ribosomal protein S13 -0.0238736
PCM1 pericentriolar material 1 -0.0235908
RPS23 ribosomal protein S23 -0.0235395
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0231513
MEF2A myocyte enhancer factor 2A -0.0231165
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0228417
CLEC1B C-type lectin domain family 1, member B -0.0226659
DSCAM Down syndrome cell adhesion molecule -0.0226264
SUB1 SUB1 homolog (S. cerevisiae) -0.022579
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0224833
SSR1 signal sequence receptor, alpha -0.0224712
PXMP2 peroxisomal membrane protein 2, 22kDa -0.0222534
CNOT8 CCR4-NOT transcription complex, subunit 8 -0.0221595
CFDP1 craniofacial development protein 1 -0.0221121
MMP14 matrix metallopeptidase 14 (membrane-inserted) -0.022082
KLHDC10 kelch domain containing 10 -0.0220058