Thymidine Gene Set

Dataset DeepCoverMOA Drug Mechanisms of Action
Category proteomics
Type drug perturbation
Description A pyrimidine 2'-deoxyribonucleoside having thymine as the nucleobase. (Chemical Entities of Biological Interest Ontology, CHEBI_17748)
External Link https://pubchem.ncbi.nlm.nih.gov/compound/5789
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Genes

200 proteins with high or low expression in Thymidine relative to other proteins from the DeepCoverMOA Drug Mechanisms of Action dataset.

high expression

Symbol Name Standardized Value
JAK3 Janus kinase 3 1.03
ADCY10 adenylate cyclase 10 (soluble) 0.66
CASTOR2 cytosolic arginine sensor for mTORC1 subunit 2 0.64
RAD23B RAD23 homolog B (S. cerevisiae) 0.61
TP73 tumor protein p73 0.57
CEP128 centrosomal protein 128kDa 0.54
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.53
RNF220 ring finger protein 220 0.52
SELENOI selenoprotein I 0.49
TPM2 tropomyosin 2 (beta) 0.48
KMT2B lysine (K)-specific methyltransferase 2B 0.48
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme 0.48
PRPF38A pre-mRNA processing factor 38A 0.48
ARID5B AT rich interactive domain 5B (MRF1-like) 0.46
DONSON downstream neighbor of SON 0.46
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.46
FUNDC1 FUN14 domain containing 1 0.45
RTN4R reticulon 4 receptor 0.45
METTL22 methyltransferase like 22 0.45
GPALPP1 GPALPP motifs containing 1 0.44
CACNA2D2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 0.43
KLHL15 kelch-like family member 15 0.39
PCLAF PCNA clamp associated factor 0.39
RPL17 ribosomal protein L17 0.39
NUP62 nucleoporin 62kDa 0.38
ENO1 enolase 1, (alpha) 0.38
TJP1 tight junction protein 1 0.38
CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 0.37
DCTN2 dynactin 2 (p50) 0.36
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.35
TNNC2 troponin C type 2 (fast) 0.35
FAAH fatty acid amide hydrolase 0.35
PIH1D1 PIH1 domain containing 1 0.35
POTEE POTE ankyrin domain family, member E 0.35
SLC43A3 solute carrier family 43, member 3 0.35
PCNX1 pecanex 1 0.35
SYAP1 synapse associated protein 1 0.34
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 0.34
KIF21A kinesin family member 21A 0.34
INO80B INO80 complex subunit B 0.34
RGL2 ral guanine nucleotide dissociation stimulator-like 2 0.33
GCSH glycine cleavage system protein H (aminomethyl carrier) 0.33
DENND5A DENN/MADD domain containing 5A 0.32
CDC37L1 cell division cycle 37-like 1 0.32
HMGN3 high mobility group nucleosomal binding domain 3 0.32
VGF VGF nerve growth factor inducible 0.32
NFU1 NFU1 iron-sulfur cluster scaffold 0.32
TMC4 transmembrane channel-like 4 0.32
CCDC9B coiled-coil domain containing 9B 0.32
FAM177A1 family with sequence similarity 177, member A1 0.32
PEX5 peroxisomal biogenesis factor 5 0.31
MREG melanoregulin 0.31
RWDD1 RWD domain containing 1 0.31
UBQLN2 ubiquilin 2 0.31
ATXN7L3 ataxin 7-like 3 0.31
MIEF1 mitochondrial elongation factor 1 0.31
RBMX RNA binding motif protein, X-linked 0.3
ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 0.3
SELENOF selenoprotein F 0.3
ALG3 ALG3, alpha-1,3- mannosyltransferase 0.3
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 0.3
RIPK4 receptor-interacting serine-threonine kinase 4 0.29
MXRA7 matrix-remodelling associated 7 0.29
PLAAT3 phospholipase A and acyltransferase 3 0.29
ARL6 ADP-ribosylation factor-like 6 0.29
RPN2 ribophorin II 0.29
ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 0.29
DESI1 desumoylating isopeptidase 1 0.29
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) 0.29
ATP9B ATPase, class II, type 9B 0.28
ZNF503 zinc finger protein 503 0.28
CNTNAP3 contactin associated protein-like 3 0.28
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.28
ZNF444 zinc finger protein 444 0.27
TRIML2 tripartite motif family-like 2 0.27
RAB6D RAB6D, member RAS oncogene family 0.27
FAT3 FAT atypical cadherin 3 0.27
NEMP1 nuclear envelope integral membrane protein 1 0.27
RPAIN RPA interacting protein 0.27
ASF1B anti-silencing function 1B histone chaperone 0.27
ANKRD44 ankyrin repeat domain 44 0.27
TPBG trophoblast glycoprotein 0.27
PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 0.27
TCHP trichoplein, keratin filament binding 0.27
SLC16A10 solute carrier family 16 (aromatic amino acid transporter), member 10 0.27
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.27
SPC24 SPC24, NDC80 kinetochore complex component 0.27
CABLES2 Cdk5 and Abl enzyme substrate 2 0.27
FUBP1 far upstream element (FUSE) binding protein 1 0.26
HAUS7 HAUS augmin-like complex, subunit 7 0.26
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.26
SELENOK selenoprotein K 0.26
PTMS parathymosin 0.26
DYNLL1 dynein, light chain, LC8-type 1 0.26
TTC7A tetratricopeptide repeat domain 7A 0.26
BSDC1 BSD domain containing 1 0.25
TEN1 TEN1 CST complex subunit 0.25
ZC3HAV1L zinc finger CCCH-type, antiviral 1-like 0.25
RCN2 reticulocalbin 2, EF-hand calcium binding domain 0.25
MYADM myeloid-associated differentiation marker 0.25

low expression

Symbol Name Standardized Value
PIP prolactin-induced protein -1.12
AZGP1 alpha-2-glycoprotein 1, zinc-binding -1.01
B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 -0.68
ANKRD12 ankyrin repeat domain 12 -0.6
ELF2 E74-like factor 2 (ets domain transcription factor) -0.58
ALDOA aldolase A, fructose-bisphosphate -0.51
BOD1 biorientation of chromosomes in cell division 1 -0.5
PARPBP PARP1 binding protein -0.49
TMEM39A transmembrane protein 39A -0.48
OBSL1 obscurin-like 1 -0.48
KIAA1958 KIAA1958 -0.47
VGLL4 vestigial-like family member 4 -0.47
CD58 CD58 molecule -0.45
LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2 -0.45
TMEM63A transmembrane protein 63A -0.43
UCHL5 ubiquitin carboxyl-terminal hydrolase L5 -0.43
MYH15 myosin, heavy chain 15 -0.42
WRB tryptophan rich basic protein -0.4
POMP proteasome maturation protein -0.39
YIF1A Yip1 interacting factor homolog A (S. cerevisiae) -0.39
MDK midkine (neurite growth-promoting factor 2) -0.38
YDJC YdjC homolog (bacterial) -0.38
POLR2M polymerase (RNA) II (DNA directed) polypeptide M -0.38
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.37
KLC1 kinesin light chain 1 -0.36
DDA1 DET1 and DDB1 associated 1 -0.36
WDR25 WD repeat domain 25 -0.35
C12ORF4 chromosome 12 open reading frame 4 -0.35
TRIAP1 TP53 regulated inhibitor of apoptosis 1 -0.35
ZNF264 zinc finger protein 264 -0.34
EFNB1 ephrin-B1 -0.34
RFX7 regulatory factor X, 7 -0.34
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 -0.33
DOLK dolichol kinase -0.33
MEX3A mex-3 RNA binding family member A -0.33
DERL1 derlin 1 -0.32
SLC35B1 solute carrier family 35, member B1 -0.32
CNTROB centrobin, centrosomal BRCA2 interacting protein -0.32
ERCC8 excision repair cross-complementation group 8 -0.32
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C -0.31
GJC1 gap junction protein, gamma 1, 45kDa -0.31
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa -0.31
FZD3 frizzled class receptor 3 -0.31
TJP3 tight junction protein 3 -0.31
ESYT2 extended synaptotagmin-like protein 2 -0.31
EPHX4 epoxide hydrolase 4 -0.31
TUFT1 tuftelin 1 -0.3
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.3
KLF10 Kruppel-like factor 10 -0.3
OGDHL oxoglutarate dehydrogenase-like -0.3
SUMF1 sulfatase modifying factor 1 -0.3
MPDU1 mannose-P-dolichol utilization defect 1 -0.3
ZNF624 zinc finger protein 624 -0.3
LOXL2 lysyl oxidase-like 2 -0.3
MED22 mediator complex subunit 22 -0.3
SHKBP1 SH3KBP1 binding protein 1 -0.3
CENPT centromere protein T -0.3
TTN titin -0.29
C12ORF66 chromosome 12 open reading frame 66 -0.29
P3H2 prolyl 3-hydroxylase 2 -0.29
NAAA N-acylethanolamine acid amidase -0.29
PPIP5K1 diphosphoinositol pentakisphosphate kinase 1 -0.29
HSP90AB4P heat shock protein 90kDa alpha (cytosolic), class B member 4, pseudogene -0.28
TMEM222 transmembrane protein 222 -0.28
HM13 histocompatibility (minor) 13 -0.28
RGL3 ral guanine nucleotide dissociation stimulator-like 3 -0.28
ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 -0.28
NOP10 NOP10 ribonucleoprotein -0.28
ICAM1 intercellular adhesion molecule 1 -0.28
MBLAC2 metallo-beta-lactamase domain containing 2 -0.28
KCTD1 potassium channel tetramerization domain containing 1 -0.27
PIGX phosphatidylinositol glycan anchor biosynthesis, class X -0.27
NDFIP1 Nedd4 family interacting protein 1 -0.27
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2 -0.27
PECR peroxisomal trans-2-enoyl-CoA reductase -0.27
ZDHHC23 zinc finger, DHHC-type containing 23 -0.27
WIPF3 WAS/WASL interacting protein family, member 3 -0.27
WASF3 WAS protein family, member 3 -0.27
LTBR lymphotoxin beta receptor (TNFR superfamily, member 3) -0.27
BOLA1 bolA family member 1 -0.27
LYPLA2 lysophospholipase II -0.27
CCDC90B coiled-coil domain containing 90B -0.27
MIIP migration and invasion inhibitory protein -0.27
SYDE1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans) -0.27
BAHCC1 BAH domain and coiled-coil containing 1 -0.27
PRMT2IP PRMT2 interacting protein -0.26
NEB nebulin -0.26
PCNX3 pecanex 3 -0.26
PREX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 -0.26
COQ2 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase -0.26
FN1 fibronectin 1 -0.25
SNAPIN SNAP-associated protein -0.25
HLA-A major histocompatibility complex, class I, A -0.25
UBE2C ubiquitin-conjugating enzyme E2C -0.25
PCGF6 polycomb group ring finger 6 -0.25
ARSD arylsulfatase D -0.25
R3HDM2 R3H domain containing 2 -0.25
HMGXB4 HMG box domain containing 4 -0.25
ANAPC10 anaphase promoting complex subunit 10 -0.24
ALAS1 5'-aminolevulinate synthase 1 -0.24