Thymol_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Thymol perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Thymol_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.234996
IGFBP3 insulin-like growth factor binding protein 3 0.201641
TRIO trio Rho guanine nucleotide exchange factor 0.18536
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.176189
DLG1 discs, large homolog 1 (Drosophila) 0.117097
PODXL podocalyxin-like 0.110812
FLNB filamin B, beta 0.107059
CDH13 cadherin 13 0.0968643
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0957759
VIM vimentin 0.0902754
CD44 CD44 molecule (Indian blood group) 0.085012
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0781426
EGFR epidermal growth factor receptor 0.0760554
RUNX1 runt-related transcription factor 1 0.0739541
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0733799
ELL2 elongation factor, RNA polymerase II, 2 0.0710035
SLC39A11 solute carrier family 39, member 11 0.0653171
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0632295
LOX lysyl oxidase 0.058497
SEPTIN9 septin 9 0.0583749
ERRFI1 ERBB receptor feedback inhibitor 1 0.0583702
TPM3 tropomyosin 3 0.0583327
NDRG1 N-myc downstream regulated 1 0.0563588
EFNA5 ephrin-A5 0.0556426
MYADM myeloid-associated differentiation marker 0.0549041
BHLHE40 basic helix-loop-helix family, member e40 0.0526777
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0523112
COL5A1 collagen, type V, alpha 1 0.052038
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0507352
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0483391
FN1 fibronectin 1 0.0481933
DCLK2 doublecortin-like kinase 2 0.0471503
ANXA5 annexin A5 0.0468122
AKAP12 A kinase (PRKA) anchor protein 12 0.0464924
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0460624
ZNF292 zinc finger protein 292 0.0457256
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0454716
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0444134
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0433829
CEP170 centrosomal protein 170kDa 0.0425906
SYTL3 synaptotagmin-like 3 0.0424795
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0421184
MYOF myoferlin 0.0412361
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0411912
ZEB1 zinc finger E-box binding homeobox 1 0.040907
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0379271
NFE2L1 nuclear factor, erythroid 2-like 1 0.0379253
RHOBTB3 Rho-related BTB domain containing 3 0.0377327
CD109 CD109 molecule 0.0372981
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0367854
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0365361
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0359681
RAI1 retinoic acid induced 1 0.0358687
SMYD3 SET and MYND domain containing 3 0.0358552
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0358547
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0358523
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0357554
SEPTIN7 septin 7 0.0357285
CD99 CD99 molecule 0.0355762
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0350635
DST dystonin 0.0350596
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0346732
YEATS2 YEATS domain containing 2 0.0342752
NAV1 neuron navigator 1 0.0340675
SETD5 SET domain containing 5 0.0339426
MB21D2 Mab-21 domain containing 2 0.033792
ADAM9 ADAM metallopeptidase domain 9 0.0337325
AXL AXL receptor tyrosine kinase 0.0321864
USP34 ubiquitin specific peptidase 34 0.0309308
HDAC9 histone deacetylase 9 0.0305514
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0303014
BACE2 beta-site APP-cleaving enzyme 2 0.0301461
PDIA3 protein disulfide isomerase family A, member 3 0.0300273
PKM pyruvate kinase, muscle 0.0298943
ZNF148 zinc finger protein 148 0.0298106
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0297927
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0297739
SLC38A1 solute carrier family 38, member 1 0.0295965
S100A10 S100 calcium binding protein A10 0.0293105
MKI67 marker of proliferation Ki-67 0.0290365
AFF4 AF4/FMR2 family, member 4 0.0288083
DOCK5 dedicator of cytokinesis 5 0.0287186
DPYSL2 dihydropyrimidinase-like 2 0.0284483
PFKP phosphofructokinase, platelet 0.0282745
ANXA2 annexin A2 0.02804
SMC4 structural maintenance of chromosomes 4 0.0279714
RTN4 reticulon 4 0.0279606
LIMCH1 LIM and calponin homology domains 1 0.0278741
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1 0.0275731
ESYT2 extended synaptotagmin-like protein 2 0.0272918
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0272859
HELZ helicase with zinc finger 0.0271822
PBX3 pre-B-cell leukemia homeobox 3 0.0269829
BCL2L1 BCL2-like 1 0.0268777
ANKRD11 ankyrin repeat domain 11 0.0268699
MSN moesin 0.0268242
PDIA6 protein disulfide isomerase family A, member 6 0.0265541
KMT2E lysine (K)-specific methyltransferase 2E 0.0265249
AFF3 AF4/FMR2 family, member 3 0.0263838
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.0263757

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.254928
FBN1 fibrillin 1 -0.089864
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0692526
TPT1 tumor protein, translationally-controlled 1 -0.0547435
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0524415
SOD2 superoxide dismutase 2, mitochondrial -0.049899
AHNAK AHNAK nucleoprotein -0.0493417
ACTG1 actin gamma 1 -0.0484956
VCL vinculin -0.0465454
INTS6 integrator complex subunit 6 -0.0461112
COL8A1 collagen, type VIII, alpha 1 -0.044035
LMNA lamin A/C -0.0423678
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0423174
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0414309
PTMA prothymosin, alpha -0.0405552
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0384642
COL1A2 collagen, type I, alpha 2 -0.0378895
SQSTM1 sequestosome 1 -0.0365512
RPS24 ribosomal protein S24 -0.0359539
POTEF POTE ankyrin domain family, member F -0.0344805
SP100 SP100 nuclear antigen -0.0330027
RPL23 ribosomal protein L23 -0.0328934
IFIH1 interferon induced with helicase C domain 1 -0.0292208
HLA-B major histocompatibility complex, class I, B -0.0287846
RPL35A ribosomal protein L35a -0.0286286
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0285486
RIGI RNA sensor RIG-I -0.0278439
SEC61G Sec61 gamma subunit -0.0274227
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0269257
FRMD5 FERM domain containing 5 -0.0261834
ZBTB20 zinc finger and BTB domain containing 20 -0.0258135
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0252723
RPL28 ribosomal protein L28 -0.0252042
COL5A2 collagen, type V, alpha 2 -0.0251371
HSPB1 heat shock 27kDa protein 1 -0.0244352
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0233353
HLA-C major histocompatibility complex, class I, C -0.0230611
UBC ubiquitin C -0.0224587
TRA2A transformer 2 alpha homolog (Drosophila) -0.0222714
KDM4B lysine (K)-specific demethylase 4B -0.0222701
CAVIN1 caveolae associated protein 1 -0.0221454
NAP1L1 nucleosome assembly protein 1-like 1 -0.0218801
RPL19 ribosomal protein L19 -0.021759
RPS19 ribosomal protein S19 -0.0215391
COL1A1 collagen, type I, alpha 1 -0.0213833
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0209746
EIF1 eukaryotic translation initiation factor 1 -0.020453
RPS27A ribosomal protein S27a -0.0203969
CD81 CD81 molecule -0.0199563
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0198254
RPL9 ribosomal protein L9 -0.019735
MYL12B myosin, light chain 12B, regulatory -0.0195153
JAZF1 JAZF zinc finger 1 -0.0194068
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0189249
WNT2B wingless-type MMTV integration site family, member 2B -0.0182253
GPC6 glypican 6 -0.0181766
RPL34 ribosomal protein L34 -0.0181101
MX2 MX dynamin-like GTPase 2 -0.0178944
RPS8 ribosomal protein S8 -0.0177609
AEBP2 AE binding protein 2 -0.0177577
RPS21 ribosomal protein S21 -0.0176326
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0176299
RPL11 ribosomal protein L11 -0.0175552
FBXO11 F-box protein 11 -0.0173659
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0173292
ISG15 ISG15 ubiquitin-like modifier -0.0173126
SPDYA speedy/RINGO cell cycle regulator family member A -0.0172972
MT1X metallothionein 1X -0.0172878
SDK1 sidekick cell adhesion molecule 1 -0.0172615
ENO2 enolase 2 (gamma, neuronal) -0.0171764
RPS3 ribosomal protein S3 -0.017119
ARL15 ADP-ribosylation factor-like 15 -0.0170542
ANKRD10 ankyrin repeat domain 10 -0.0170174
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0168657
RPL26 ribosomal protein L26 -0.0167333
RPL32 ribosomal protein L32 -0.0167284
COL6A1 collagen, type VI, alpha 1 -0.0163195
CUX1 cut-like homeobox 1 -0.0162976
TMEM263 transmembrane protein 263 -0.0162076
TPST1 tyrosylprotein sulfotransferase 1 -0.0158765
RPS11 ribosomal protein S11 -0.0156912
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0154715
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0153755
KDM3A lysine (K)-specific demethylase 3A -0.0153364
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0153059
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0152919
KRT81 keratin 81, type II -0.015227
FUS FUS RNA binding protein -0.0150925
DDR2 discoidin domain receptor tyrosine kinase 2 -0.0150839
WTAP Wilms tumor 1 associated protein -0.0150083
IFITM3 interferon induced transmembrane protein 3 -0.0150082
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0149809
FBXL7 F-box and leucine-rich repeat protein 7 -0.0149372
NLK nemo-like kinase -0.0148914
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0147677
MT2A metallothionein 2A -0.0147654
EDF1 endothelial differentiation-related factor 1 -0.0147251
FTL ferritin, light polypeptide -0.0145507
RPS14 ribosomal protein S14 -0.0145228
RPL31 ribosomal protein L31 -0.014436