Thymol_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Thymol perturbation in LS 180 cell line (Tahoe Therapeutics)
Similar Terms
Downloads & Tools

Genes

200 genes differentially expressed following the Thymol_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.171062
RPS6 ribosomal protein S6 0.153422
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.116395
MUC6 mucin 6, oligomeric mucus/gel-forming 0.102621
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0965099
VEGFA vascular endothelial growth factor A 0.0839508
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0772569
TXNIP thioredoxin interacting protein 0.0771165
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0631639
LDHA lactate dehydrogenase A 0.059519
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0582997
ESYT2 extended synaptotagmin-like protein 2 0.0578857
MYO1E myosin IE 0.0570605
FTH1 ferritin, heavy polypeptide 1 0.0564271
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0559478
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0547295
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0542982
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0537562
FAT1 FAT atypical cadherin 1 0.052922
PDIA3 protein disulfide isomerase family A, member 3 0.0525577
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0517652
ENO1 enolase 1, (alpha) 0.0516568
BACE2 beta-site APP-cleaving enzyme 2 0.051266
KTN1 kinectin 1 (kinesin receptor) 0.0504073
PKM pyruvate kinase, muscle 0.0503667
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0494476
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0490555
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.048918
NEBL nebulette 0.0482364
PPARG peroxisome proliferator-activated receptor gamma 0.0480688
RREB1 ras responsive element binding protein 1 0.0463742
EGFR epidermal growth factor receptor 0.0451345
NDRG1 N-myc downstream regulated 1 0.0446858
AKAP9 A kinase (PRKA) anchor protein 9 0.0445376
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0435235
CALR calreticulin 0.0435065
DNM2 dynamin 2 0.0419268
GLG1 golgi glycoprotein 1 0.040968
FTL ferritin, light polypeptide 0.0407961
HSPA8 heat shock 70kDa protein 8 0.0403376
ZNF292 zinc finger protein 292 0.0402134
TTC3 tetratricopeptide repeat domain 3 0.0395865
HMGA1 high mobility group AT-hook 1 0.0389837
LMO7 LIM domain 7 0.0385622
SNX9 sorting nexin 9 0.0383828
MXI1 MAX interactor 1, dimerization protein 0.0370685
PTPRR protein tyrosine phosphatase, receptor type, R 0.0370476
PDIA6 protein disulfide isomerase family A, member 6 0.0361865
KIF5B kinesin family member 5B 0.035711
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0348636
BAZ2B bromodomain adjacent to zinc finger domain, 2B 0.0347854
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0337281
ALCAM activated leukocyte cell adhesion molecule 0.0333345
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0332593
PARD3B par-3 family cell polarity regulator beta 0.03312
TPM4 tropomyosin 4 0.0329366
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.0321086
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.031997
GOLGB1 golgin B1 0.0318923
KPNB1 karyopherin (importin) beta 1 0.0316623
SERBP1 SERPINE1 mRNA binding protein 1 0.0309773
GOLGA4 golgin A4 0.0309641
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.0308602
PNRC1 proline-rich nuclear receptor coactivator 1 0.0307392
PLS1 plastin 1 0.030119
IQGAP1 IQ motif containing GTPase activating protein 1 0.0299797
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0298971
ARFGEF3 ARFGEF family member 3 0.0296508
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0296223
ERRFI1 ERBB receptor feedback inhibitor 1 0.029244
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0291304
GTF2IRD1 GTF2I repeat domain containing 1 0.0289269
TPM3 tropomyosin 3 0.0287097
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0286832
SSR1 signal sequence receptor, alpha 0.0283812
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0282784
CADPS2 Ca++-dependent secretion activator 2 0.0281934
CDK13 cyclin-dependent kinase 13 0.0279543
DSPP dentin sialophosphoprotein 0.0276114
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.0275581
ABHD2 abhydrolase domain containing 2 0.0275454
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0275329
PTEN phosphatase and tensin homolog 0.0275243
RPS2 ribosomal protein S2 0.0274503
CCSER1 coiled-coil serine-rich protein 1 0.0274391
MLEC malectin 0.0274233
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0273289
AKAP13 A kinase (PRKA) anchor protein 13 0.0272976
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0270407
SAMD5 sterile alpha motif domain containing 5 0.0269546
VCAN versican 0.0268809
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0267066
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0264536
ATXN1 ataxin 1 0.0262016
ANTXR2 anthrax toxin receptor 2 0.0257598
JAK1 Janus kinase 1 0.0256029
SLK STE20-like kinase 0.025468
GPBP1 GC-rich promoter binding protein 1 0.0254641
N4BP2L2 NEDD4 binding protein 2-like 2 0.0254338
SMC4 structural maintenance of chromosomes 4 0.0252039

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.173261
TPT1 tumor protein, translationally-controlled 1 -0.127798
VCL vinculin -0.0896389
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0871352
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0759393
NPSR1 neuropeptide S receptor 1 -0.0732208
NALF1 NALCN channel auxiliary factor 1 -0.0687105
ACTN4 actinin, alpha 4 -0.0578062
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0578014
RPS24 ribosomal protein S24 -0.0533386
RPS21 ribosomal protein S21 -0.0507923
ACTG1 actin gamma 1 -0.0428936
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0415143
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0414803
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0404208
IER3 immediate early response 3 -0.0379451
RPL36 ribosomal protein L36 -0.0375625
TRA2A transformer 2 alpha homolog (Drosophila) -0.0353417
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0312503
PCDHB16 protocadherin beta 16 -0.0310957
SPON1 spondin 1, extracellular matrix protein -0.0302531
MYH9 myosin, heavy chain 9, non-muscle -0.0284867
RPL32 ribosomal protein L32 -0.0277236
RBM39 RNA binding motif protein 39 -0.0276792
TMEM135 transmembrane protein 135 -0.027346
S100P S100 calcium binding protein P -0.0266281
NRN1 neuritin 1 -0.0260646
GPHN gephyrin -0.0258053
WDR1 WD repeat domain 1 -0.025666
FRMD5 FERM domain containing 5 -0.0253892
RPLP2 ribosomal protein, large, P2 -0.0250489
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0247772
S100A9 S100 calcium binding protein A9 -0.0245989
LAMB3 laminin, beta 3 -0.0241073
RPS27A ribosomal protein S27a -0.0239739
LAMA4 laminin, alpha 4 -0.0237304
RPS3 ribosomal protein S3 -0.0235315
KDM3A lysine (K)-specific demethylase 3A -0.0231375
RPS11 ribosomal protein S11 -0.0229722
KITLG KIT ligand -0.0227946
MARCHF6 membrane associated ring-CH-type finger 6 -0.0225697
RPL36AL ribosomal protein L36a-like -0.0221824
PIGR polymeric immunoglobulin receptor -0.0219954
MYL12B myosin, light chain 12B, regulatory -0.0219547
DERA deoxyribose-phosphate aldolase (putative) -0.0219316
WWC1 WW and C2 domain containing 1 -0.021869
KRT18 keratin 18, type I -0.0218002
AHNAK AHNAK nucleoprotein -0.0217576
ANXA2 annexin A2 -0.0217191
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0217067
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0214421
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0214237
TFF1 trefoil factor 1 -0.0213991
KRT8 keratin 8, type II -0.0213866
GADD45A growth arrest and DNA-damage-inducible, alpha -0.0211772
ATP5F1B ATP synthase F1 subunit beta -0.0211548
GARS1 glycyl-tRNA synthetase 1 -0.0210309
SHROOM3 shroom family member 3 -0.0208228
MYO1D myosin ID -0.0208128
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0208041
RPL9 ribosomal protein L9 -0.0203707
INSIG1 insulin induced gene 1 -0.0203564
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.020262
S100A14 S100 calcium binding protein A14 -0.0201871
TFRC transferrin receptor -0.0201035
RPL26 ribosomal protein L26 -0.0200582
CACNB2 calcium channel, voltage-dependent, beta 2 subunit -0.019567
RRBP1 ribosome binding protein 1 -0.0194474
ATF4 activating transcription factor 4 -0.0191723
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0191346
EWSR1 EWS RNA-binding protein 1 -0.0189174
RBM26 RNA binding motif protein 26 -0.0188963
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 -0.0186494
RBBP6 retinoblastoma binding protein 6 -0.0186218
IFRD1 interferon-related developmental regulator 1 -0.0184953
QSOX1 quiescin Q6 sulfhydryl oxidase 1 -0.0183779
LMNA lamin A/C -0.0183556
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0180846
EEF1B2 eukaryotic translation elongation factor 1 beta 2 -0.0180223
ETV6 ets variant 6 -0.0178952
PGK1 phosphoglycerate kinase 1 -0.0178619
TRIO trio Rho guanine nucleotide exchange factor -0.0178301
THSD4 thrombospondin, type I, domain containing 4 -0.0175666
MYOF myoferlin -0.0174142
SAR1A secretion associated, Ras related GTPase 1A -0.0172707
TM9SF3 transmembrane 9 superfamily member 3 -0.0172416
EMP1 epithelial membrane protein 1 -0.0171557
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0171296
GANAB glucosidase, alpha; neutral AB -0.0169621
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial -0.016896
PLAUR plasminogen activator, urokinase receptor -0.0166828
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0166692
PDLIM5 PDZ and LIM domain 5 -0.0166417
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0166179
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0165778
VWA8 von Willebrand factor A domain containing 8 -0.0165149
CDK6 cyclin-dependent kinase 6 -0.0164181
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0164005
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) -0.0163391
GALNT1 polypeptide N-acetylgalactosaminyltransferase 1 -0.0163361