Thymol_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Thymol perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Thymol_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.179194
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.151983
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.123789
CAPRIN2 caprin family member 2 0.120047
DST dystonin 0.117148
TP63 tumor protein p63 0.0985733
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0752317
FTL ferritin, light polypeptide 0.0653874
ERRFI1 ERBB receptor feedback inhibitor 1 0.0647724
HMGA1 high mobility group AT-hook 1 0.0636401
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0613722
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0610492
PSD3 pleckstrin and Sec7 domain containing 3 0.0587904
ESYT2 extended synaptotagmin-like protein 2 0.0554974
TXNIP thioredoxin interacting protein 0.0554743
ZDHHC14 zinc finger, DHHC-type containing 14 0.0548784
KMT2E lysine (K)-specific methyltransferase 2E 0.053214
PDE10A phosphodiesterase 10A 0.0525573
PRELID2 PRELI domain containing 2 0.0506109
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0499924
CADM2 cell adhesion molecule 2 0.0489733
SDK1 sidekick cell adhesion molecule 1 0.0486244
BCAR3 breast cancer anti-estrogen resistance 3 0.0486201
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0476373
WWTR1 WW domain containing transcription regulator 1 0.0468711
DNER delta/notch-like EGF repeat containing 0.0450548
RPS6 ribosomal protein S6 0.0442241
VMP1 vacuole membrane protein 1 0.0439322
LPP LIM domain containing preferred translocation partner in lipoma 0.0436928
P4HB prolyl 4-hydroxylase, beta polypeptide 0.043336
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 0.0425552
ANGPTL4 angiopoietin-like 4 0.0425102
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0422024
KTN1 kinectin 1 (kinesin receptor) 0.0415629
FMNL2 formin-like 2 0.0405517
NDRG1 N-myc downstream regulated 1 0.0371608
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0370492
TRIM56 tripartite motif containing 56 0.0366808
F2R coagulation factor II (thrombin) receptor 0.0360559
HLA-B major histocompatibility complex, class I, B 0.0357215
DPYD dihydropyrimidine dehydrogenase 0.035265
DPH6 diphthamine biosynthesis 6 0.0346337
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0336081
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0332529
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0331418
ENO1 enolase 1, (alpha) 0.0328421
RPS27 ribosomal protein S27 0.0320983
RAD51B RAD51 paralog B 0.0319913
ZNF292 zinc finger protein 292 0.0318554
RPS12 ribosomal protein S12 0.0315798
BBX bobby sox homolog (Drosophila) 0.0315262
AGTPBP1 ATP/GTP binding protein 1 0.0314886
MEF2A myocyte enhancer factor 2A 0.0312375
WSB1 WD repeat and SOCS box containing 1 0.0312236
GYS1 glycogen synthase 1 (muscle) 0.030966
TSC22D1 TSC22 domain family, member 1 0.0309275
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0308004
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0306593
SUMF1 sulfatase modifying factor 1 0.0306268
ZBTB20 zinc finger and BTB domain containing 20 0.0302141
PRKCE protein kinase C, epsilon 0.0299273
CSMD3 CUB and Sushi multiple domains 3 0.0298879
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.029343
ARFGEF3 ARFGEF family member 3 0.0282296
VEGFA vascular endothelial growth factor A 0.0282026
RIOK3 RIO kinase 3 0.0280142
MT1E metallothionein 1E 0.0277367
TTC3 tetratricopeptide repeat domain 3 0.0276905
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0275055
ZFP36L1 ZFP36 ring finger protein-like 1 0.027476
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0269734
RPL31 ribosomal protein L31 0.0266951
RAB27B RAB27B, member RAS oncogene family 0.0266258
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0261285
NPAS2 neuronal PAS domain protein 2 0.0256916
MBD5 methyl-CpG binding domain protein 5 0.0255256
EGFR epidermal growth factor receptor 0.0255179
ANK2 ankyrin 2, neuronal 0.0249227
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.024842
PRKN parkin RBR E3 ubiquitin protein ligase 0.0247391
ANTXR2 anthrax toxin receptor 2 0.0245455
SEC24A SEC24 family member A 0.0245313
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0245273
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0245103
PLK2 polo-like kinase 2 0.024352
JMJD1C jumonji domain containing 1C 0.0243381
SOX9 SRY (sex determining region Y)-box 9 0.0243015
KDM4C lysine (K)-specific demethylase 4C 0.0243002
AREG amphiregulin 0.0240626
RPL39 ribosomal protein L39 0.0239782
S100A6 S100 calcium binding protein A6 0.0239075
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0238569
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0237215
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0236615
ARL4C ADP-ribosylation factor-like 4C 0.0236025
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0235432
FTH1 ferritin, heavy polypeptide 1 0.0229698
TBL1X transducin (beta)-like 1X-linked 0.0228331
JAK1 Janus kinase 1 0.0226493
GCLM glutamate-cysteine ligase, modifier subunit 0.0226201

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.207079
VIM vimentin -0.157294
TMSB10 thymosin beta 10 -0.13218
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.113267
TMSB4X thymosin beta 4, X-linked -0.107979
AHNAK AHNAK nucleoprotein -0.105259
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0962973
DLG1 discs, large homolog 1 (Drosophila) -0.094502
CENPF centromere protein F, 350/400kDa -0.0927166
PTMA prothymosin, alpha -0.082408
TXNRD1 thioredoxin reductase 1 -0.0822276
RAI1 retinoic acid induced 1 -0.0795565
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0776521
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0770038
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0731082
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0653935
SLC38A2 solute carrier family 38, member 2 -0.0641503
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0604684
ACTG1 actin gamma 1 -0.0600539
CANX calnexin -0.0582733
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0538127
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.051507
EEF2 eukaryotic translation elongation factor 2 -0.0508525
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0496643
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0485988
RTN4 reticulon 4 -0.0459228
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0451797
SRGN serglycin -0.0447774
ANLN anillin, actin binding protein -0.0445552
ECT2 epithelial cell transforming 2 -0.0442733
LOC112694756 uncharaterized LOC112694756 -0.0438215
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0434589
MKI67 marker of proliferation Ki-67 -0.0430627
PGK1 phosphoglycerate kinase 1 -0.0426724
SMC4 structural maintenance of chromosomes 4 -0.0419699
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0404911
RPS24 ribosomal protein S24 -0.0388963
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.038063
APP amyloid beta (A4) precursor protein -0.0377945
CSDE1 cold shock domain containing E1, RNA-binding -0.0377352
RPL23 ribosomal protein L23 -0.0376685
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0375017
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0371509
KIF14 kinesin family member 14 -0.0362849
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0361986
ANXA1 annexin A1 -0.0350899
CMIP c-Maf inducing protein -0.0349765
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0341027
CAPRIN1 cell cycle associated protein 1 -0.0339957
RRM2 ribonucleotide reductase M2 -0.0339636
DIAPH3 diaphanous-related formin 3 -0.0339287
TNPO1 transportin 1 -0.0338469
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0337128
HDLBP high density lipoprotein binding protein -0.0327904
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0326705
HMGB2 high mobility group box 2 -0.0323518
ANKRD11 ankyrin repeat domain 11 -0.0321027
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit -0.0318574
UBR4 ubiquitin protein ligase E3 component n-recognin 4 -0.0310512
HJURP Holliday junction recognition protein -0.031
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.030751
ADGRG6 adhesion G protein-coupled receptor G6 -0.0306527
RPLP0 ribosomal protein, large, P0 -0.0305551
TRIP12 thyroid hormone receptor interactor 12 -0.0297786
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0294762
TPT1 tumor protein, translationally-controlled 1 -0.0293464
MYH9 myosin, heavy chain 9, non-muscle -0.0289731
ZNF217 zinc finger protein 217 -0.0289313
GARS1 glycyl-tRNA synthetase 1 -0.0289024
SFPQ splicing factor proline/glutamine-rich -0.0286544
SGO2 shugoshin 2 -0.0285366
MAPK8 mitogen-activated protein kinase 8 -0.0284241
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0282165
SET SET nuclear proto-oncogene -0.0281899
MIS18BP1 MIS18 binding protein 1 -0.0280694
ELOVL5 ELOVL fatty acid elongase 5 -0.0276538
ZBTB38 zinc finger and BTB domain containing 38 -0.0275044
CUL1 cullin 1 -0.0273788
CEP170 centrosomal protein 170kDa -0.0269544
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0269351
CKAP5 cytoskeleton associated protein 5 -0.0261508
MACF1 microtubule-actin crosslinking factor 1 -0.0261449
FUS FUS RNA binding protein -0.0259286
CKAP2 cytoskeleton associated protein 2 -0.0257914
YBX1 Y box binding protein 1 -0.0254456
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0253693
EIF4A1 eukaryotic translation initiation factor 4A1 -0.025123
ARHGAP29 Rho GTPase activating protein 29 -0.0250869
TASOR2 transcription activation suppressor family member 2 -0.0250089
PTPN11 protein tyrosine phosphatase, non-receptor type 11 -0.0249764
CELF1 CUGBP, Elav-like family member 1 -0.0248068
RLIM ring finger protein, LIM domain interacting -0.0247489
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0246261
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0245973
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 -0.0245531
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0244929
MARCHF6 membrane associated ring-CH-type finger 6 -0.0243328
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 -0.0240197
MIB1 mindbomb E3 ubiquitin protein ligase 1 -0.0237892
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0236724