Tirabrutinib (hydrochloride)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tirabrutinib (hydrochloride) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tirabrutinib (hydrochloride)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.223898
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.17651
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.152724
PABPC1 poly(A) binding protein, cytoplasmic 1 0.145697
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.112596
HDAC9 histone deacetylase 9 0.101302
JMJD1C jumonji domain containing 1C 0.0927801
STC1 stanniocalcin 1 0.086319
BHLHE40 basic helix-loop-helix family, member e40 0.0759481
IARS1 isoleucyl-tRNA synthetase 1 0.0744158
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0729005
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0699572
CANX calnexin 0.0683964
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0620679
SET SET nuclear proto-oncogene 0.0618497
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0611006
LAMB3 laminin, beta 3 0.0596126
NUP58 nucleoporin 58 0.0594723
GARS1 glycyl-tRNA synthetase 1 0.0541392
NAV3 neuron navigator 3 0.0540037
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.053048
PTK2 protein tyrosine kinase 2 0.0515096
CREB5 cAMP responsive element binding protein 5 0.0491898
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.048693
MYH9 myosin, heavy chain 9, non-muscle 0.048574
VMP1 vacuole membrane protein 1 0.0484964
RPL7 ribosomal protein L7 0.0484338
CALU calumenin 0.0479771
KMT2E lysine (K)-specific methyltransferase 2E 0.0460939
KMT2C lysine (K)-specific methyltransferase 2C 0.0459726
RBM39 RNA binding motif protein 39 0.0452848
KIF5B kinesin family member 5B 0.0446454
TXNRD1 thioredoxin reductase 1 0.0439066
EIF1 eukaryotic translation initiation factor 1 0.0435635
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0434957
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0432395
APLP2 amyloid beta (A4) precursor-like protein 2 0.0429567
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0421313
FLNA filamin A, alpha 0.0416179
USP9X ubiquitin specific peptidase 9, X-linked 0.041584
HLA-A major histocompatibility complex, class I, A 0.0414283
GOLGA4 golgin A4 0.0410796
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0409462
DSCAM Down syndrome cell adhesion molecule 0.0408047
RNMT RNA (guanine-7-) methyltransferase 0.0402397
SETX senataxin 0.0401516
BRD2 bromodomain containing 2 0.0401249
BIRC6 baculoviral IAP repeat containing 6 0.0398902
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0398419
RPL37A ribosomal protein L37a 0.0395528
RPS6 ribosomal protein S6 0.0391875
MCL1 myeloid cell leukemia 1 0.03905
SETD5 SET domain containing 5 0.0389656
TPD52 tumor protein D52 0.0389647
NABP1 nucleic acid binding protein 1 0.0378471
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0378196
EIF3A eukaryotic translation initiation factor 3, subunit A 0.037532
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0373933
YTHDC1 YTH domain containing 1 0.03695
ARFGEF3 ARFGEF family member 3 0.0369254
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.036917
SRRM2 serine/arginine repetitive matrix 2 0.0367898
FNDC3B fibronectin type III domain containing 3B 0.0367402
RAD23B RAD23 homolog B (S. cerevisiae) 0.0365418
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0361797
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0360861
PAPOLA poly(A) polymerase alpha 0.0346543
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0345017
SON SON DNA binding protein 0.0344681
TMF1 TATA element modulatory factor 1 0.0344174
RAB5A RAB5A, member RAS oncogene family 0.0341445
SPAG9 sperm associated antigen 9 0.0340474
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.034
RBM25 RNA binding motif protein 25 0.0338253
RAD21 RAD21 homolog (S. pombe) 0.0337265
MTDH metadherin 0.0335136
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.033421
KDM6A lysine (K)-specific demethylase 6A 0.0332157
GOLGB1 golgin B1 0.0329749
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.032609
KDM5C lysine (K)-specific demethylase 5C 0.0323244
SEC24A SEC24 family member A 0.0320334
CRY1 cryptochrome circadian clock 1 0.0320045
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0319193
PUM1 pumilio RNA-binding family member 1 0.0317369
PGK1 phosphoglycerate kinase 1 0.0317149
RUNX1 runt-related transcription factor 1 0.0317097
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0316181
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0313393
FRMD6 FERM domain containing 6 0.0311766
SRRM1 serine/arginine repetitive matrix 1 0.0310216
WAC WW domain containing adaptor with coiled-coil 0.0309186
RAB7A RAB7A, member RAS oncogene family 0.03063
BRD4 bromodomain containing 4 0.0306105
KTN1 kinectin 1 (kinesin receptor) 0.0305797
SFPQ splicing factor proline/glutamine-rich 0.0305207
NCKAP1 NCK-associated protein 1 0.0304601
ZBTB43 zinc finger and BTB domain containing 43 0.0303232
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0299695
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0298512

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.0783211
FLNB filamin B, beta -0.0717058
CALD1 caldesmon 1 -0.0695732
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0690638
DLC1 DLC1 Rho GTPase activating protein -0.0667875
RAD51B RAD51 paralog B -0.0612008
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0605568
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0589677
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0587508
C2CD2 C2 calcium-dependent domain containing 2 -0.0508323
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0504926
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0501547
FHIT fragile histidine triad -0.0497767
NAV2 neuron navigator 2 -0.0433996
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0419735
LRMDA leucine rich melanocyte differentiation associated -0.0417808
PHC2 polyhomeotic homolog 2 (Drosophila) -0.0375427
IFI16 interferon, gamma-inducible protein 16 -0.0372096
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.035836
SMYD3 SET and MYND domain containing 3 -0.0350419
RAB3IP RAB3A interacting protein -0.0349838
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.034237
ARHGAP22 Rho GTPase activating protein 22 -0.0339313
RIGI RNA sensor RIG-I -0.033493
LPP LIM domain containing preferred translocation partner in lipoma -0.0321886
TMSB10 thymosin beta 10 -0.0312446
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0304422
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.030332
PBX3 pre-B-cell leukemia homeobox 3 -0.030154
ANTXR2 anthrax toxin receptor 2 -0.029
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0288578
RPLP0 ribosomal protein, large, P0 -0.0288284
FHL2 four and a half LIM domains 2 -0.0284769
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0272432
BNC2 basonuclin 2 -0.0270581
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0267473
ZBTB20 zinc finger and BTB domain containing 20 -0.0254987
DIAPH2 diaphanous-related formin 2 -0.0254369
IFI6 interferon, alpha-inducible protein 6 -0.0253866
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0253321
RPS24 ribosomal protein S24 -0.0248938
SPRED1 sprouty-related, EVH1 domain containing 1 -0.0244479
AFF1 AF4/FMR2 family, member 1 -0.0237436
CAMKMT calmodulin-lysine N-methyltransferase -0.0236375
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0234051
AOPEP aminopeptidase O (putative) -0.0233853
ANK2 ankyrin 2, neuronal -0.0229925
MACF1 microtubule-actin crosslinking factor 1 -0.0226823
PKP4 plakophilin 4 -0.0225397
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0217431
FOXO3 forkhead box O3 -0.0214153
NRIP1 nuclear receptor interacting protein 1 -0.0210514
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0210302
RPL26 ribosomal protein L26 -0.0209871
RPL28 ribosomal protein L28 -0.0209733
CAMK2D calcium/calmodulin-dependent protein kinase II delta -0.0208444
ARSJ arylsulfatase family, member J -0.0208096
PPP1R9A protein phosphatase 1, regulatory subunit 9A -0.0207324
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0205746
CRACD capping protein inhibiting regulator of actin dynamics -0.0200823
VEPH1 ventricular zone expressed PH domain-containing 1 -0.0200794
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0200462
RNF169 ring finger protein 169 -0.0198544
CCDC91 coiled-coil domain containing 91 -0.0197534
SAMD12 sterile alpha motif domain containing 12 -0.0195765
RPL35A ribosomal protein L35a -0.0195544
VCL vinculin -0.0194407
XPO6 exportin 6 -0.0190911
ZHX3 zinc fingers and homeoboxes 3 -0.0189706
LGALS12 lectin, galactoside-binding, soluble, 12 -0.0189412
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0187116
CDCP1 CUB domain containing protein 1 -0.0185613
PARP8 poly (ADP-ribose) polymerase family, member 8 -0.0180723
ADGRG6 adhesion G protein-coupled receptor G6 -0.0179283
KANK1 KN motif and ankyrin repeat domains 1 -0.0178731
ZNF438 zinc finger protein 438 -0.0178543
ANKRD28 ankyrin repeat domain 28 -0.0177976
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0176072
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0174833
CUL1 cullin 1 -0.0174762
WWOX WW domain containing oxidoreductase -0.0172619
CPNE3 copine III -0.0172506
FRMD4A FERM domain containing 4A -0.0171234
WASHC4 WASH complex subunit 4 -0.0168677
RUSC2 RUN and SH3 domain containing 2 -0.0167598
TRIO trio Rho guanine nucleotide exchange factor -0.0164746
CADM1 cell adhesion molecule 1 -0.0164331
DST dystonin -0.0163947
TTR transthyretin -0.0163207
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.016226
NDRG1 N-myc downstream regulated 1 -0.0161635
MSI2 musashi RNA-binding protein 2 -0.0161523
TBC1D5 TBC1 domain family, member 5 -0.0161109
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0160382
MAPK1 mitogen-activated protein kinase 1 -0.0159265
ACBD6 acyl-CoA binding domain containing 6 -0.0158106
RPLP2 ribosomal protein, large, P2 -0.0157729
CREB1 cAMP responsive element binding protein 1 -0.0154206
KIF13A kinesin family member 13A -0.0151762
FOXP1 forkhead box P1 -0.0151175