Tofacitinib (citrate)_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tofacitinib (citrate) perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tofacitinib (citrate)_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.143472
ERRFI1 ERBB receptor feedback inhibitor 1 0.110624
FN1 fibronectin 1 0.109804
AKAP12 A kinase (PRKA) anchor protein 12 0.105194
DSPP dentin sialophosphoprotein 0.102957
ENO1 enolase 1, (alpha) 0.0935628
SAMD4A sterile alpha motif domain containing 4A 0.0756879
C3 complement component 3 0.0717203
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0676681
FTH1 ferritin, heavy polypeptide 1 0.0651602
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0646623
VMP1 vacuole membrane protein 1 0.0626756
TNS1 tensin 1 0.0616526
PEG3 paternally expressed 3 0.0605818
VEGFA vascular endothelial growth factor A 0.0554076
TF transferrin 0.054983
DLC1 DLC1 Rho GTPase activating protein 0.053657
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0520702
SVIL supervillin 0.0513272
FAT1 FAT atypical cadherin 1 0.0503083
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0481183
JMJD1C jumonji domain containing 1C 0.0477891
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0458891
BCL2L1 BCL2-like 1 0.0454165
DNAH17 dynein, axonemal, heavy chain 17 0.0450983
EEF2 eukaryotic translation elongation factor 2 0.0448057
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0445542
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0420699
ARHGAP9 Rho GTPase activating protein 9 0.0416668
MYH9 myosin, heavy chain 9, non-muscle 0.0409423
ELL2 elongation factor, RNA polymerase II, 2 0.0395708
FRMD5 FERM domain containing 5 0.03941
NKD1 naked cuticle homolog 1 (Drosophila) 0.0392262
EHBP1 EH domain binding protein 1 0.0391472
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0341129
IGFBP3 insulin-like growth factor binding protein 3 0.033999
CTSB cathepsin B 0.0336123
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0318718
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0312137
DNAH5 dynein, axonemal, heavy chain 5 0.0299203
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0296891
CCNY cyclin Y 0.0294356
IGFBP1 insulin-like growth factor binding protein 1 0.0293076
FERMT1 fermitin family member 1 0.0292012
PKP4 plakophilin 4 0.0290766
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0289821
RPS18 ribosomal protein S18 0.0285307
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.028262
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0281084
SPRED2 sprouty-related, EVH1 domain containing 2 0.027797
SEPTIN9 septin 9 0.0273152
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0270921
ARHGEF18 Rho/Rac guanine nucleotide exchange factor (GEF) 18 0.026897
MACF1 microtubule-actin crosslinking factor 1 0.0265829
BHLHE40 basic helix-loop-helix family, member e40 0.0261363
LMCD1 LIM and cysteine-rich domains 1 0.0257589
ATP10A ATPase, class V, type 10A 0.0253814
PPARD peroxisome proliferator-activated receptor delta 0.0252218
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0251247
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 0.0247855
MATR3 matrin 3 0.024686
WWTR1 WW domain containing transcription regulator 1 0.0244346
RAI14 retinoic acid induced 14 0.0244339
YME1L1 YME1-like 1 ATPase 0.024428
TMEM41B transmembrane protein 41B 0.0243986
TPM4 tropomyosin 4 0.023748
FBXO42 F-box protein 42 0.0235284
RPL26 ribosomal protein L26 0.023089
TPM3 tropomyosin 3 0.0230659
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0226478
ENAH enabled homolog (Drosophila) 0.0225495
ANXA5 annexin A5 0.0224241
SMAD3 SMAD family member 3 0.0222966
DOCK5 dedicator of cytokinesis 5 0.0222475
EIF4B eukaryotic translation initiation factor 4B 0.0221207
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0220523
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0220106
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0219881
TMEM181 transmembrane protein 181 0.021841
CEP250 centrosomal protein 250kDa 0.0214321
RIN2 Ras and Rab interactor 2 0.0212789
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0212127
ITGB5 integrin, beta 5 0.0210789
HSPA8 heat shock 70kDa protein 8 0.0208906
OPTN optineurin 0.0208074
MTSS1 metastasis suppressor 1 0.0207495
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0205084
TCIM transcriptional and immune response regulator 0.0204293
RUNX1 runt-related transcription factor 1 0.019995
ARFGEF3 ARFGEF family member 3 0.019718
DOCK4 dedicator of cytokinesis 4 0.0195015
YAP1 Yes-associated protein 1 0.0194527
HLF hepatic leukemia factor 0.0193393
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 0.0193393
PLEC plectin 0.0192803
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0191474
ESYT2 extended synaptotagmin-like protein 2 0.0189875
SESTD1 SEC14 and spectrin domains 1 0.0189603
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0188256
SCAF11 SR-related CTD-associated factor 11 0.0187821

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.242876
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.149795
APOA2 apolipoprotein A-II -0.115077
TIMP1 TIMP metallopeptidase inhibitor 1 -0.102948
MT2A metallothionein 2A -0.0993178
TMSB10 thymosin beta 10 -0.0834244
APOB apolipoprotein B -0.0818958
HMGA1 high mobility group AT-hook 1 -0.0781664
PDLIM5 PDZ and LIM domain 5 -0.0764896
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0754897
VCL vinculin -0.0634618
GPC6 glypican 6 -0.0517368
GMDS GDP-mannose 4,6-dehydratase -0.0508509
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0500304
SOX5 SRY (sex determining region Y)-box 5 -0.0463878
KIF21A kinesin family member 21A -0.0461404
LRMDA leucine rich melanocyte differentiation associated -0.0451609
GNAS GNAS complex locus -0.0435841
RPL34 ribosomal protein L34 -0.0419603
ASPH aspartate beta-hydroxylase -0.0409338
ZBTB20 zinc finger and BTB domain containing 20 -0.0378212
PLIN2 perilipin 2 -0.0377753
RPS21 ribosomal protein S21 -0.0372301
PTCHD4 patched domain containing 4 -0.0367179
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0365797
TLE4 transducin-like enhancer of split 4 -0.0363537
SLC38A2 solute carrier family 38, member 2 -0.0363099
RPL32 ribosomal protein L32 -0.0351095
GLS2 glutaminase 2 (liver, mitochondrial) -0.0342613
RPLP2 ribosomal protein, large, P2 -0.0334337
SDC4 syndecan 4 -0.0323981
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0323303
GPC3 glypican 3 -0.0323199
CP ceruloplasmin (ferroxidase) -0.0319372
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0314039
HMGA2 high mobility group AT-hook 2 -0.0305817
NPR2 natriuretic peptide receptor 2 -0.0303636
RPL35A ribosomal protein L35a -0.0299462
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0296908
RNF213 ring finger protein 213 -0.0295683
RPL23 ribosomal protein L23 -0.0291514
ACTG1 actin gamma 1 -0.0288633
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0287487
NABP1 nucleic acid binding protein 1 -0.0286583
FHIT fragile histidine triad -0.0283576
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0282527
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0278666
SOX4 SRY (sex determining region Y)-box 4 -0.0278659
INTS6 integrator complex subunit 6 -0.0271593
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0271195
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 -0.02689
HP1BP3 heterochromatin protein 1, binding protein 3 -0.026836
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0268354
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0266316
MT1X metallothionein 1X -0.0260728
MIDN midnolin -0.0259374
ADGRG6 adhesion G protein-coupled receptor G6 -0.02564
FNDC3B fibronectin type III domain containing 3B -0.0254659
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0252938
RBM39 RNA binding motif protein 39 -0.0252804
DTNA dystrobrevin, alpha -0.0248532
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.024608
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.024576
EGR1 early growth response 1 -0.0243353
TM4SF1 transmembrane 4 L six family member 1 -0.0241499
DENND4A DENN/MADD domain containing 4A -0.0240749
FOXO3 forkhead box O3 -0.024003
SQSTM1 sequestosome 1 -0.0238358
PHF3 PHD finger protein 3 -0.023734
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0236158
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0234871
RPS5 ribosomal protein S5 -0.02347
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0233696
MAP1B microtubule-associated protein 1B -0.0232
FMNL2 formin-like 2 -0.0231519
PTPRK protein tyrosine phosphatase, receptor type, K -0.0231031
RPS24 ribosomal protein S24 -0.0230716
CYB5R3 cytochrome b5 reductase 3 -0.023036
PALLD palladin, cytoskeletal associated protein -0.0228542
S100A9 S100 calcium binding protein A9 -0.0226204
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.022615
VCAN versican -0.0221193
CAMTA1 calmodulin binding transcription activator 1 -0.0218637
ANKRD12 ankyrin repeat domain 12 -0.0218293
AMBP alpha-1-microglobulin/bikunin precursor -0.0217664
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0217549
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0217525
DSCAM Down syndrome cell adhesion molecule -0.0215602
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0215352
RPS6 ribosomal protein S6 -0.0214086
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0213226
THOC2 THO complex 2 -0.021237
ZNF804A zinc finger protein 804A -0.0209549
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0206869
H1-0 H1.0 linker histone -0.0204353
PFN1 profilin 1 -0.0203553
OSBPL8 oxysterol binding protein-like 8 -0.0202234
RPL9 ribosomal protein L9 -0.0200226
RBM25 RNA binding motif protein 25 -0.0200057
IFRD1 interferon-related developmental regulator 1 -0.0199142