Tofacitinib (citrate)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tofacitinib (citrate) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tofacitinib (citrate)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 0.0992599
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0866195
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0776614
VCL vinculin 0.0747461
TXNRD1 thioredoxin reductase 1 0.0700316
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0639415
RPS6 ribosomal protein S6 0.0639002
CD44 CD44 molecule (Indian blood group) 0.0628485
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0622202
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0620458
HDAC9 histone deacetylase 9 0.0613305
HAS2 hyaluronan synthase 2 0.0568206
FRMD6 FERM domain containing 6 0.0559346
RUNX1 runt-related transcription factor 1 0.054532
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0530853
MSN moesin 0.0530708
LSAMP limbic system-associated membrane protein 0.0515118
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0486682
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0484948
BCAR3 breast cancer anti-estrogen resistance 3 0.0476068
ADAM19 ADAM metallopeptidase domain 19 0.0472467
CALD1 caldesmon 1 0.0470093
CDK17 cyclin-dependent kinase 17 0.0459256
EIF4B eukaryotic translation initiation factor 4B 0.0455423
BTG1 B-cell translocation gene 1, anti-proliferative 0.0427264
LIMA1 LIM domain and actin binding 1 0.0422294
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0398685
PBX3 pre-B-cell leukemia homeobox 3 0.0386625
ITGA6 integrin, alpha 6 0.0378606
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0378123
MYH9 myosin, heavy chain 9, non-muscle 0.0374841
FTH1 ferritin, heavy polypeptide 1 0.0374225
NTM neurotrimin 0.0364296
RPS18 ribosomal protein S18 0.0358575
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0355022
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0350831
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0350464
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0343233
RTN4 reticulon 4 0.033935
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0325911
DTNA dystrobrevin, alpha 0.0324464
EEF2 eukaryotic translation elongation factor 2 0.0318053
ATP13A3 ATPase type 13A3 0.0315285
ANKRD28 ankyrin repeat domain 28 0.0314336
NAV3 neuron navigator 3 0.0310699
MKI67 marker of proliferation Ki-67 0.0306382
JMJD1C jumonji domain containing 1C 0.0306157
PAWR PRKC, apoptosis, WT1, regulator 0.0299582
TXNIP thioredoxin interacting protein 0.0296312
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0291196
RHOA ras homolog family member A 0.0289818
EIF1 eukaryotic translation initiation factor 1 0.0285827
ADAM9 ADAM metallopeptidase domain 9 0.0281913
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0269486
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0268736
MARCHF4 membrane associated ring-CH-type finger 4 0.026749
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0267447
RND3 Rho family GTPase 3 0.02674
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.0267229
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0265155
RPS2 ribosomal protein S2 0.0261472
FOSL1 FOS-like antigen 1 0.0260307
SRRM2 serine/arginine repetitive matrix 2 0.0258663
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.0258548
ENKUR enkurin, TRPC channel interacting protein 0.0249207
ZEB1 zinc finger E-box binding homeobox 1 0.0244752
AXL AXL receptor tyrosine kinase 0.0235797
ERBIN erbb2 interacting protein 0.0235004
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.023175
TNNC1 troponin C type 1 (slow) 0.0230304
BDNF brain-derived neurotrophic factor 0.0228915
NPC1 Niemann-Pick disease, type C1 0.0227731
PICALM phosphatidylinositol binding clathrin assembly protein 0.0225135
CASC3 cancer susceptibility candidate 3 0.0224701
SPRED1 sprouty-related, EVH1 domain containing 1 0.0223819
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0220101
TPM3 tropomyosin 3 0.0219969
TM4SF19 transmembrane 4 L six family member 19 0.0219876
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0218646
DNMBP dynamin binding protein 0.0218636
MED13L mediator complex subunit 13-like 0.0217885
RNF145 ring finger protein 145 0.0217219
LOXL2 lysyl oxidase-like 2 0.0216928
VMP1 vacuole membrane protein 1 0.0214212
RPS7 ribosomal protein S7 0.0214111
ALCAM activated leukocyte cell adhesion molecule 0.0212759
RPL11 ribosomal protein L11 0.0212057
RPL26 ribosomal protein L26 0.0210197
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0207134
RPL3 ribosomal protein L3 0.0206767
KTN1 kinectin 1 (kinesin receptor) 0.0206464
RB1CC1 RB1-inducible coiled-coil 1 0.0205492
SIK3 SIK family kinase 3 0.0202938
RPS3 ribosomal protein S3 0.0200166
AKAP12 A kinase (PRKA) anchor protein 12 0.0197273
ELL2 elongation factor, RNA polymerase II, 2 0.0193435
CDK14 cyclin-dependent kinase 14 0.0192011
CENPF centromere protein F, 350/400kDa 0.0191044
KAT6A K(lysine) acetyltransferase 6A 0.0187577
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0185189

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.216093
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.171504
GPC6 glypican 6 -0.132748
TMSB10 thymosin beta 10 -0.128742
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0956747
CDH13 cadherin 13 -0.0903982
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0863648
PRKG1 protein kinase, cGMP-dependent, type I -0.0816128
ASPH aspartate beta-hydroxylase -0.0716753
ACTG1 actin gamma 1 -0.0701549
NDRG1 N-myc downstream regulated 1 -0.0688003
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0678974
RPL23 ribosomal protein L23 -0.0675887
PTPRD protein tyrosine phosphatase, receptor type, D -0.0656081
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0630996
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0615448
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0611456
UBC ubiquitin C -0.0610163
RPS27A ribosomal protein S27a -0.0561582
TRIO trio Rho guanine nucleotide exchange factor -0.0558609
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0501188
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0500633
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0482589
RIGI RNA sensor RIG-I -0.0467455
NALF1 NALCN channel auxiliary factor 1 -0.0454867
PTK2 protein tyrosine kinase 2 -0.0453125
INTS6 integrator complex subunit 6 -0.0444064
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0435131
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0418776
RPLP1 ribosomal protein, large, P1 -0.0415446
PHACTR1 phosphatase and actin regulator 1 -0.0415029
NAV1 neuron navigator 1 -0.0414881
TPT1 tumor protein, translationally-controlled 1 -0.0397442
PKM pyruvate kinase, muscle -0.0397294
LIMCH1 LIM and calponin homology domains 1 -0.0396791
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0387467
IFI16 interferon, gamma-inducible protein 16 -0.0384201
TRPS1 trichorhinophalangeal syndrome I -0.038036
EFNA5 ephrin-A5 -0.0380031
NABP1 nucleic acid binding protein 1 -0.0371659
SP100 SP100 nuclear antigen -0.0371622
PCBP2 poly(rC) binding protein 2 -0.0371621
ZNF804A zinc finger protein 804A -0.0363756
GNAS GNAS complex locus -0.036144
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0358872
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0353538
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0345297
FNDC3B fibronectin type III domain containing 3B -0.0339791
KIAA1549L KIAA1549-like -0.0338631
NAP1L1 nucleosome assembly protein 1-like 1 -0.0334153
STC1 stanniocalcin 1 -0.0329857
RPL27A ribosomal protein L27a -0.0327856
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0319311
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0311076
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0302663
FGFR1 fibroblast growth factor receptor 1 -0.0298358
AHNAK AHNAK nucleoprotein -0.0295907
PCDH9 protocadherin 9 -0.0291928
RNF213 ring finger protein 213 -0.0291793
TLE4 transducin-like enhancer of split 4 -0.0290094
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0285774
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0285736
RPL8 ribosomal protein L8 -0.0285471
TTC3 tetratricopeptide repeat domain 3 -0.0284467
WSB1 WD repeat and SOCS box containing 1 -0.0279306
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0278658
LASP1 LIM and SH3 protein 1 -0.027845
RPLP2 ribosomal protein, large, P2 -0.0277665
C2CD2 C2 calcium-dependent domain containing 2 -0.0275693
MBD5 methyl-CpG binding domain protein 5 -0.0273766
SEPTIN7 septin 7 -0.0273154
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0268118
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0266972
KDM4C lysine (K)-specific demethylase 4C -0.0266447
RPS24 ribosomal protein S24 -0.026624
CAVIN1 caveolae associated protein 1 -0.0265975
KIAA1217 KIAA1217 -0.0260087
FTL ferritin, light polypeptide -0.0259638
HIPK2 homeodomain interacting protein kinase 2 -0.0257889
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0256258
PRKCE protein kinase C, epsilon -0.0254523
SFPQ splicing factor proline/glutamine-rich -0.0250862
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0250741
RPS19 ribosomal protein S19 -0.0247746
MAP4 microtubule-associated protein 4 -0.0247706
ZSWIM6 zinc finger, SWIM-type containing 6 -0.024545
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.024531
TAOK1 TAO kinase 1 -0.0242256
PTPRG protein tyrosine phosphatase, receptor type, G -0.0240739
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0236906
MSR1 macrophage scavenger receptor 1 -0.0234787
LPP LIM domain containing preferred translocation partner in lipoma -0.0232739
PGK1 phosphoglycerate kinase 1 -0.0231848
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0228647
IFI6 interferon, alpha-inducible protein 6 -0.0227933
TMEM263 transmembrane protein 263 -0.0225665
NBAS neuroblastoma amplified sequence -0.0224866
GLS2 glutaminase 2 (liver, mitochondrial) -0.0223197
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0221166
ADAM32 ADAM metallopeptidase domain 32 -0.0219498