Tofacitinib (citrate)_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tofacitinib (citrate) perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tofacitinib (citrate)_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.213662
ASPH aspartate beta-hydroxylase 0.10164
TMEM156 transmembrane protein 156 0.0895779
FN1 fibronectin 1 0.0820625
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0801064
NAMPT nicotinamide phosphoribosyltransferase 0.0731566
VEGFA vascular endothelial growth factor A 0.0725653
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0526749
NRP1 neuropilin 1 0.0491261
MCTP2 multiple C2 domains, transmembrane 2 0.047687
CD109 CD109 molecule 0.0466818
MAP1B microtubule-associated protein 1B 0.0458433
FAT1 FAT atypical cadherin 1 0.0457841
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0447381
AKAP12 A kinase (PRKA) anchor protein 12 0.0434285
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0419062
TXNIP thioredoxin interacting protein 0.0410475
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0410403
MYH9 myosin, heavy chain 9, non-muscle 0.0392692
WWTR1 WW domain containing transcription regulator 1 0.0375494
TPR translocated promoter region, nuclear basket protein 0.0374588
ELL2 elongation factor, RNA polymerase II, 2 0.037381
B2M beta-2-microglobulin 0.0369645
CD44 CD44 molecule (Indian blood group) 0.0361206
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0348145
ANKRD28 ankyrin repeat domain 28 0.0343915
TPM3 tropomyosin 3 0.0342962
CAB39 calcium binding protein 39 0.0342945
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0337594
UGCG UDP-glucose ceramide glucosyltransferase 0.0334698
TXNRD1 thioredoxin reductase 1 0.0328355
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0325028
RICTOR RPTOR independent companion of MTOR, complex 2 0.0318119
MATR3 matrin 3 0.0317991
SMAD3 SMAD family member 3 0.0316893
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0296712
MBNL1 muscleblind-like splicing regulator 1 0.0294583
PTK2 protein tyrosine kinase 2 0.0290922
PRRC2C proline-rich coiled-coil 2C 0.0287888
DST dystonin 0.028449
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.027515
SRRM2 serine/arginine repetitive matrix 2 0.0275036
ARRDC3 arrestin domain containing 3 0.0267227
ETNK1 ethanolamine kinase 1 0.0262875
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0261446
JMJD1C jumonji domain containing 1C 0.0256766
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0249593
ENO1 enolase 1, (alpha) 0.0248164
CAPN2 calpain 2, (m/II) large subunit 0.0248096
KDM2A lysine (K)-specific demethylase 2A 0.0245461
RTN4 reticulon 4 0.0242306
RNF145 ring finger protein 145 0.0240969
EPS8 epidermal growth factor receptor pathway substrate 8 0.0239097
FAM13A family with sequence similarity 13, member A 0.0238578
RB1CC1 RB1-inducible coiled-coil 1 0.0236116
CALR calreticulin 0.0234759
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0232195
NTN4 netrin 4 0.0231494
KMT2E lysine (K)-specific methyltransferase 2E 0.0228209
PDS5A PDS5 cohesin associated factor A 0.0227079
FNBP1 formin binding protein 1 0.0224815
SVIL supervillin 0.0224586
ADAM17 ADAM metallopeptidase domain 17 0.0223749
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0220196
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0219371
FOSL1 FOS-like antigen 1 0.0218855
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0218792
APLP2 amyloid beta (A4) precursor-like protein 2 0.0212415
AHR aryl hydrocarbon receptor 0.021153
PABPC1 poly(A) binding protein, cytoplasmic 1 0.021022
TNIP1 TNFAIP3 interacting protein 1 0.0209977
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0209845
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0207877
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0207468
CDCP1 CUB domain containing protein 1 0.020663
DPY19L1 dpy-19-like 1 (C. elegans) 0.0206394
COPA coatomer protein complex, subunit alpha 0.0205707
MAP3K9 mitogen-activated protein kinase kinase kinase 9 0.020447
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0203996
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0202925
UBA6 ubiquitin-like modifier activating enzyme 6 0.0201896
PELO pelota homolog (Drosophila) 0.0201418
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0200608
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0200464
AKAP9 A kinase (PRKA) anchor protein 9 0.0200448
SCAF11 SR-related CTD-associated factor 11 0.0199633
RAB22A RAB22A, member RAS oncogene family 0.0199185
LAMB1 laminin, beta 1 0.0197762
BHLHE40 basic helix-loop-helix family, member e40 0.0197095
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0196415
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.019608
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.01952
SMYD3 SET and MYND domain containing 3 0.0194868
CREB5 cAMP responsive element binding protein 5 0.0194193
SPRED2 sprouty-related, EVH1 domain containing 2 0.0193348
PRPF8 pre-mRNA processing factor 8 0.0193223
VEGFC vascular endothelial growth factor C 0.0192646
LTBP1 latent transforming growth factor beta binding protein 1 0.0191288
AREG amphiregulin 0.0190788
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0189931

decreased expression

Symbol Name Standardized Value
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.284426
NRG1 neuregulin 1 -0.262573
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.174707
HMGA2 high mobility group AT-hook 2 -0.122815
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0940328
TMSB10 thymosin beta 10 -0.0882237
INTS6 integrator complex subunit 6 -0.0861275
SQSTM1 sequestosome 1 -0.0856712
AEBP2 AE binding protein 2 -0.0828268
PTMA prothymosin, alpha -0.0650495
STC2 stanniocalcin 2 -0.0619079
TPT1 tumor protein, translationally-controlled 1 -0.0562315
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0534967
CANX calnexin -0.0529932
PALLD palladin, cytoskeletal associated protein -0.0527421
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0522745
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0486773
EFNA5 ephrin-A5 -0.0478725
LRRC23 leucine rich repeat containing 23 -0.0476303
HLA-B major histocompatibility complex, class I, B -0.0460525
PRELID2 PRELI domain containing 2 -0.0453338
GNAS GNAS complex locus -0.0447903
MRPS6 mitochondrial ribosomal protein S6 -0.0427154
WSB1 WD repeat and SOCS box containing 1 -0.0411202
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0405586
VCL vinculin -0.0401686
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A -0.0392194
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0381544
MBD5 methyl-CpG binding domain protein 5 -0.0381411
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.037967
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0367979
FAM20C family with sequence similarity 20, member C -0.0365711
ACTG1 actin gamma 1 -0.0361257
AHRR aryl-hydrocarbon receptor repressor -0.0357413
SPDYA speedy/RINGO cell cycle regulator family member A -0.035613
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0352931
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0351301
RPS24 ribosomal protein S24 -0.0349656
SYT1 synaptotagmin I -0.0349511
TBC1D22A TBC1 domain family, member 22A -0.0342408
SOD2 superoxide dismutase 2, mitochondrial -0.0337416
RAI14 retinoic acid induced 14 -0.0336452
TAS2R14 taste receptor, type 2, member 14 -0.0324495
BICD1 bicaudal D homolog 1 (Drosophila) -0.0319352
AHI1 Abelson helper integration site 1 -0.0318139
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0311381
LOX lysyl oxidase -0.0310421
TMSB4X thymosin beta 4, X-linked -0.0307062
CCDC138 coiled-coil domain containing 138 -0.0296986
MT2A metallothionein 2A -0.0296
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0292352
FBN1 fibrillin 1 -0.0291652
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0289231
CADM1 cell adhesion molecule 1 -0.0289071
HDLBP high density lipoprotein binding protein -0.028283
RPL35A ribosomal protein L35a -0.0281118
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0280735
RPL37A ribosomal protein L37a -0.0276587
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0275816
RPL34 ribosomal protein L34 -0.0274986
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0271908
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0266889
RPL31 ribosomal protein L31 -0.0262699
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0260361
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0260338
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0258484
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0255895
RPL26 ribosomal protein L26 -0.0250971
ADIPOR2 adiponectin receptor 2 -0.0249159
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0247902
SOX5 SRY (sex determining region Y)-box 5 -0.0244736
ERO1B endoplasmic reticulum oxidoreductase 1 beta -0.0243239
POU2F2 POU class 2 homeobox 2 -0.0240332
TMEM263 transmembrane protein 263 -0.0235387
LARP1B La ribonucleoprotein domain family, member 1B -0.0234859
ANKRD12 ankyrin repeat domain 12 -0.0232612
IER3 immediate early response 3 -0.0231
TUFT1 tuftelin 1 -0.0230822
USP34 ubiquitin specific peptidase 34 -0.0228544
OSBPL8 oxysterol binding protein-like 8 -0.022549
TNS3 tensin 3 -0.0222615
IFRD1 interferon-related developmental regulator 1 -0.0220097
TENM4 teneurin transmembrane protein 4 -0.0216941
LMNA lamin A/C -0.0214247
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0213073
RPH3AL rabphilin 3A-like (without C2 domains) -0.0210385
LRMDA leucine rich melanocyte differentiation associated -0.0209726
TGFB1 transforming growth factor, beta 1 -0.0209345
DPYD dihydropyrimidine dehydrogenase -0.0208891
SLC38A2 solute carrier family 38, member 2 -0.0206302
RPL12 ribosomal protein L12 -0.0205919
UBAP2 ubiquitin associated protein 2 -0.0205188
RTN3 reticulon 3 -0.0203422
FUS FUS RNA binding protein -0.0200554
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0199554
ABR active BCR-related -0.0198227
MAML2 mastermind-like 2 (Drosophila) -0.0197729
GPC6 glypican 6 -0.0196945
KDM4B lysine (K)-specific demethylase 4B -0.0196734
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0193585