Tofacitinib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tofacitinib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tofacitinib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.158729
LSAMP limbic system-associated membrane protein 0.121925
PTPRD protein tyrosine phosphatase, receptor type, D 0.0979352
ZSWIM6 zinc finger, SWIM-type containing 6 0.0902441
TLE4 transducin-like enhancer of split 4 0.0683028
PLPP1 phospholipid phosphatase 1 0.061092
SLITRK6 SLIT and NTRK-like family, member 6 0.0575284
VMP1 vacuole membrane protein 1 0.0567684
GLCCI1 glucocorticoid induced 1 0.0565761
DST dystonin 0.0496889
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0483166
MEIS2 Meis homeobox 2 0.0444147
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0414734
SOS1 son of sevenless homolog 1 (Drosophila) 0.0404645
BCAS3 breast carcinoma amplified sequence 3 0.0397348
CPED1 cadherin-like and PC-esterase domain containing 1 0.0392631
KLHL13 kelch-like family member 13 0.0384276
GREM2 gremlin 2, DAN family BMP antagonist 0.0372585
N4BP2L2 NEDD4 binding protein 2-like 2 0.0371592
TPM1 tropomyosin 1 (alpha) 0.0370639
FN1 fibronectin 1 0.0354245
ADGRB3 adhesion G protein-coupled receptor B3 0.0354101
TIMP3 TIMP metallopeptidase inhibitor 3 0.0346363
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0333051
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0329242
TPST1 tyrosylprotein sulfotransferase 1 0.0326931
EGR1 early growth response 1 0.0308055
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0306478
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0305119
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0304073
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0303766
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0302457
PDLIM5 PDZ and LIM domain 5 0.0301536
PHF3 PHD finger protein 3 0.0298459
TENM4 teneurin transmembrane protein 4 0.0289507
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0286328
FMN1 formin 1 0.0285053
RABGAP1L RAB GTPase activating protein 1-like 0.0284685
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0284107
AHR aryl hydrocarbon receptor 0.028054
FERMT2 fermitin family member 2 0.0272369
TPM4 tropomyosin 4 0.0271319
TNRC6B trinucleotide repeat containing 6B 0.0270878
FNIP1 folliculin interacting protein 1 0.0269149
RAB30 RAB30, member RAS oncogene family 0.0268395
ZBTB20 zinc finger and BTB domain containing 20 0.0267436
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0264513
RALYL RALY RNA binding protein-like 0.0264351
FAM107B family with sequence similarity 107, member B 0.0263522
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0261814
ATM ATM serine/threonine kinase 0.0256948
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.0251942
PRKCA protein kinase C, alpha 0.0249429
ATRNL1 attractin-like 1 0.0246333
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.0245275
TTC17 tetratricopeptide repeat domain 17 0.0240422
THBS1 thrombospondin 1 0.0239591
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0235159
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0232482
ANTXR1 anthrax toxin receptor 1 0.0227218
HDX highly divergent homeobox 0.022578
TET1 tet methylcytosine dioxygenase 1 0.0225271
SEPTIN9 septin 9 0.0224797
NFE2L2 nuclear factor, erythroid 2-like 2 0.0223436
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0219347
ADGRL2 adhesion G protein-coupled receptor L2 0.0217915
IL6ST interleukin 6 signal transducer 0.0217557
CTNND1 catenin (cadherin-associated protein), delta 1 0.0216967
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0213291
FNDC3A fibronectin type III domain containing 3A 0.0212699
HSPA8 heat shock 70kDa protein 8 0.0211036
VCP valosin containing protein 0.0209696
HAND2 heart and neural crest derivatives expressed 2 0.0208317
STARD4 StAR-related lipid transfer (START) domain containing 4 0.0208302
PSD3 pleckstrin and Sec7 domain containing 3 0.0208207
EXOC4 exocyst complex component 4 0.0207725
SLIT2 slit homolog 2 (Drosophila) 0.0207264
NBEA neurobeachin 0.0206559
COL3A1 collagen, type III, alpha 1 0.0206335
HOMER1 homer scaffolding protein 1 0.0205696
UNC5C unc-5 homolog C (C. elegans) 0.0203447
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0203212
UBAP2 ubiquitin associated protein 2 0.0201191
KCNIP4 Kv channel interacting protein 4 0.0200384
MRTFA myocardin related transcription factor A 0.0200174
MDM4 MDM4, p53 regulator 0.0198751
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 0.019857
SIK2 salt-inducible kinase 2 0.0197715
RGS5 regulator of G-protein signaling 5 0.0196816
PBX1 pre-B-cell leukemia homeobox 1 0.0195486
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0195435
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0195268
PALLD palladin, cytoskeletal associated protein 0.0194939
MBTD1 mbt domain containing 1 0.0194803
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0194412
PACS1 phosphofurin acidic cluster sorting protein 1 0.0193578
CCDC57 coiled-coil domain containing 57 0.0193534
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0193352
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 0.0192527
PCDH9 protocadherin 9 0.0188175

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.27563
IGF2 insulin-like growth factor 2 -0.220829
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0929042
PTMA prothymosin, alpha -0.0820418
CEMIP cell migration inducing protein, hyaluronan binding -0.078426
MAP1B microtubule-associated protein 1B -0.0758798
NALF1 NALCN channel auxiliary factor 1 -0.0734537
RPS6 ribosomal protein S6 -0.066073
RPL23 ribosomal protein L23 -0.0639416
TMSB10 thymosin beta 10 -0.057325
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0554381
NDRG1 N-myc downstream regulated 1 -0.052287
COL1A1 collagen, type I, alpha 1 -0.0504559
RPL19 ribosomal protein L19 -0.0498569
TPT1 tumor protein, translationally-controlled 1 -0.0473497
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0454262
DSCAM Down syndrome cell adhesion molecule -0.0436914
DTNA dystrobrevin, alpha -0.0410127
VIM vimentin -0.0393429
RPL35A ribosomal protein L35a -0.038564
FTL ferritin, light polypeptide -0.0385439
RPL34 ribosomal protein L34 -0.0380525
CDK12 cyclin-dependent kinase 12 -0.0352254
RTN4 reticulon 4 -0.0349324
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0345052
RPS19 ribosomal protein S19 -0.0344037
BBX bobby sox homolog (Drosophila) -0.0337856
USP3 ubiquitin specific peptidase 3 -0.0331699
MAML2 mastermind-like 2 (Drosophila) -0.0320543
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0320309
SOX4 SRY (sex determining region Y)-box 4 -0.0317826
RPL32 ribosomal protein L32 -0.0316201
RBM25 RNA binding motif protein 25 -0.0312217
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0310266
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.03052
ADNP activity-dependent neuroprotector homeobox -0.0304858
IGF1R insulin-like growth factor 1 receptor -0.0303854
MACF1 microtubule-actin crosslinking factor 1 -0.0300342
TRIB2 tribbles pseudokinase 2 -0.0295351
RPS3 ribosomal protein S3 -0.0292679
RPS14 ribosomal protein S14 -0.0286134
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0282707
DLG1 discs, large homolog 1 (Drosophila) -0.0281577
RPL26 ribosomal protein L26 -0.0281228
IFI16 interferon, gamma-inducible protein 16 -0.0280726
HELZ helicase with zinc finger -0.0280634
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0279773
ANKRD17 ankyrin repeat domain 17 -0.027819
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0274238
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0272252
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0271479
KMT2C lysine (K)-specific methyltransferase 2C -0.0269926
RPS29 ribosomal protein S29 -0.0266605
RACK1 receptor for activated C kinase 1 -0.0265627
TNPO1 transportin 1 -0.0263401
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0262647
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0262629
GOLGA4 golgin A4 -0.0257899
IARS1 isoleucyl-tRNA synthetase 1 -0.025517
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0253904
QKI QKI, KH domain containing, RNA binding -0.025381
CDH2 cadherin 2, type 1, N-cadherin (neuronal) -0.0251047
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0250899
KMT2E lysine (K)-specific methyltransferase 2E -0.0247538
BIRC6 baculoviral IAP repeat containing 6 -0.0247323
FNDC3B fibronectin type III domain containing 3B -0.0245701
RPS25 ribosomal protein S25 -0.024298
PKM pyruvate kinase, muscle -0.0241349
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0239903
RPS8 ribosomal protein S8 -0.0238704
NF1 neurofibromin 1 -0.0236795
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.023612
PTK2 protein tyrosine kinase 2 -0.0235996
LPIN1 lipin 1 -0.023502
CRH corticotropin releasing hormone -0.023434
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 -0.0228832
RBM20 RNA binding motif protein 20 -0.022731
RPL31 ribosomal protein L31 -0.0227006
RPS21 ribosomal protein S21 -0.021986
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0219345
WRN Werner syndrome, RecQ helicase-like -0.0219084
RPS24 ribosomal protein S24 -0.0219003
NPEPPS aminopeptidase puromycin sensitive -0.0216951
AFF4 AF4/FMR2 family, member 4 -0.0215509
TBC1D22A TBC1 domain family, member 22A -0.0215287
AFF3 AF4/FMR2 family, member 3 -0.021469
CTBP2 C-terminal binding protein 2 -0.0212366
CCNI cyclin I -0.0210928
CBX3 chromobox homolog 3 -0.021044
ZNF804A zinc finger protein 804A -0.0210086
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0208273
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0207932
WSB1 WD repeat and SOCS box containing 1 -0.0207548
NBAS neuroblastoma amplified sequence -0.0207339
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0207236
PIAS2 protein inhibitor of activated STAT, 2 -0.0206252
AKAP13 A kinase (PRKA) anchor protein 13 -0.0205222
ZNF148 zinc finger protein 148 -0.0204545
FMNL2 formin-like 2 -0.0204332
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0203148