Tofacitinib_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tofacitinib perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tofacitinib_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 0.0958304
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.070452
FAT1 FAT atypical cadherin 1 0.0567559
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0561483
RPLP0 ribosomal protein, large, P0 0.0488816
TPI1 triosephosphate isomerase 1 0.0484932
PDLIM5 PDZ and LIM domain 5 0.0482067
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0477893
LAMA4 laminin, alpha 4 0.0463414
LDHA lactate dehydrogenase A 0.0451717
LMO7 LIM domain 7 0.0424307
KRT19 keratin 19, type I 0.042059
GSTP1 glutathione S-transferase pi 1 0.0401984
KRT18 keratin 18, type I 0.0395663
ANTXR2 anthrax toxin receptor 2 0.0355292
PFN1 profilin 1 0.03535
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0341982
EPS8 epidermal growth factor receptor pathway substrate 8 0.0305437
VCL vinculin 0.0303775
PSD3 pleckstrin and Sec7 domain containing 3 0.0296924
AKAP13 A kinase (PRKA) anchor protein 13 0.0288032
PTPRK protein tyrosine phosphatase, receptor type, K 0.0282648
MLEC malectin 0.0281341
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0277712
ARHGAP26 Rho GTPase activating protein 26 0.0268124
RPL18 ribosomal protein L18 0.0266168
SOX9 SRY (sex determining region Y)-box 9 0.0261457
ASPH aspartate beta-hydroxylase 0.0261299
CLDN4 claudin 4 0.0257701
MACF1 microtubule-actin crosslinking factor 1 0.0257278
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0253984
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0251347
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0249555
CEMIP cell migration inducing protein, hyaluronan binding 0.0237703
CBX3 chromobox homolog 3 0.0232985
RPS19 ribosomal protein S19 0.0225155
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0223744
MT1X metallothionein 1X 0.022263
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0222312
F3 coagulation factor III (thromboplastin, tissue factor) 0.0220632
PRSS3 protease, serine, 3 0.0220411
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0217564
HMGA1 high mobility group AT-hook 1 0.0216656
POTEF POTE ankyrin domain family, member F 0.0216025
SVIL supervillin 0.0212775
LGALS3 lectin, galactoside-binding, soluble, 3 0.021221
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.0212195
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0210555
CXCL8 chemokine (C-X-C motif) ligand 8 0.0204653
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0204653
ANXA3 annexin A3 0.0202744
CALB1 calbindin 1, 28kDa 0.0200175
PKP2 plakophilin 2 0.0195137
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0192386
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0192098
FTL ferritin, light polypeptide 0.018679
FAM120A family with sequence similarity 120A 0.0184626
CAB39 calcium binding protein 39 0.0179515
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.0179468
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0174336
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0173513
LGALS4 lectin, galactoside-binding, soluble, 4 0.0172342
NOSTRIN nitric oxide synthase trafficking 0.0171901
LURAP1L leucine rich adaptor protein 1-like 0.0168327
TAGLN2 transgelin 2 0.0167819
TNS4 tensin 4 0.0166172
KLF6 Kruppel-like factor 6 0.0165834
MT1E metallothionein 1E 0.0164012
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 0.016357
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0162396
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0160843
RCOR1 REST corepressor 1 0.0159362
EGFR epidermal growth factor receptor 0.0158224
MED13 mediator complex subunit 13 0.0158202
NRXN3 neurexin 3 0.0154419
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0153388
SEC23A Sec23 homolog A (S. cerevisiae) 0.0153009
TUBB4B tubulin, beta 4B class IVb 0.0152758
ETV6 ets variant 6 0.0152107
BZW1 basic leucine zipper and W2 domains 1 0.0150862
ABHD2 abhydrolase domain containing 2 0.0150295
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0148681
LOC102724023 ES1 protein homolog, mitochondrial 0.0148286
CENPF centromere protein F, 350/400kDa 0.0148203
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 0.0147375
GREB1L growth regulation by estrogen in breast cancer-like 0.0146894
IGFL2 IGF-like family member 2 0.0146339
ANXA11 annexin A11 0.0146214
FERMT1 fermitin family member 1 0.0143613
PELI1 pellino E3 ubiquitin protein ligase 1 0.0143332
ETNK1 ethanolamine kinase 1 0.0143056
CLTC clathrin, heavy chain (Hc) 0.0142644
TUBA1B tubulin, alpha 1b 0.0142523
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 0.0141653
ITGB5 integrin, beta 5 0.0140658
JAK2 Janus kinase 2 0.0139987
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0139725
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0138501
EIF5 eukaryotic translation initiation factor 5 0.0138115
CLIC1 chloride intracellular channel 1 0.0138016

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.175244
RPS6 ribosomal protein S6 -0.0992383
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0925189
AHNAK AHNAK nucleoprotein -0.0852529
TPT1 tumor protein, translationally-controlled 1 -0.0826656
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.081906
EZR ezrin -0.0808348
RPS27A ribosomal protein S27a -0.0804512
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0803389
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0722343
PIGR polymeric immunoglobulin receptor -0.0706922
ONECUT3 one cut homeobox 3 -0.070564
RPS29 ribosomal protein S29 -0.0648277
RPS8 ribosomal protein S8 -0.0624006
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.062114
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0610564
ESYT2 extended synaptotagmin-like protein 2 -0.0599398
EPCAM epithelial cell adhesion molecule -0.0548921
KIF5B kinesin family member 5B -0.0490477
UBC ubiquitin C -0.0488711
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0480013
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0477159
ACTG1 actin gamma 1 -0.0476074
RPLP2 ribosomal protein, large, P2 -0.0471794
FAM13A family with sequence similarity 13, member A -0.0468581
RPLP1 ribosomal protein, large, P1 -0.0458057
TXNIP thioredoxin interacting protein -0.0455522
RPL4 ribosomal protein L4 -0.0442357
GOLGA4 golgin A4 -0.0440188
CANX calnexin -0.0433157
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0417204
B2M beta-2-microglobulin -0.0392264
RPL34 ribosomal protein L34 -0.038898
RPL7A ribosomal protein L7a -0.0384714
EEF2 eukaryotic translation elongation factor 2 -0.0372512
NALF1 NALCN channel auxiliary factor 1 -0.0371295
RPS13 ribosomal protein S13 -0.0363393
KTN1 kinectin 1 (kinesin receptor) -0.0360521
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0352982
GLG1 golgi glycoprotein 1 -0.0348011
APP amyloid beta (A4) precursor protein -0.0344742
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0341921
IER3 immediate early response 3 -0.0339103
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0337904
RPL38 ribosomal protein L38 -0.033675
KDM3A lysine (K)-specific demethylase 3A -0.0332409
ACTN4 actinin, alpha 4 -0.033191
LMNA lamin A/C -0.032859
RPL31 ribosomal protein L31 -0.0328465
RPL35A ribosomal protein L35a -0.0327837
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0322528
ANXA2 annexin A2 -0.0322125
EIF1 eukaryotic translation initiation factor 1 -0.0317155
TMSB4X thymosin beta 4, X-linked -0.031371
RPL13A ribosomal protein L13a -0.0307907
NFIA nuclear factor I/A -0.0307872
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0305063
ANKRD11 ankyrin repeat domain 11 -0.0303199
HSPA8 heat shock 70kDa protein 8 -0.0302036
EEF1G eukaryotic translation elongation factor 1 gamma -0.0295955
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.029488
TC2N tandem C2 domains, nuclear -0.0294862
USP34 ubiquitin specific peptidase 34 -0.0294512
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.029261
RPS25 ribosomal protein S25 -0.0291885
OGA O-GlcNAcase -0.029067
KPNB1 karyopherin (importin) beta 1 -0.0290629
NCOR1 nuclear receptor corepressor 1 -0.0287696
AGR2 anterior gradient 2 -0.0287197
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0284828
SREBF2 sterol regulatory element binding transcription factor 2 -0.0284297
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0283784
FRMD5 FERM domain containing 5 -0.028366
EIF5B eukaryotic translation initiation factor 5B -0.0281111
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0280086
TFF1 trefoil factor 1 -0.0274469
NIPBL Nipped-B homolog (Drosophila) -0.0274116
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0272755
CCNY cyclin Y -0.0272351
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 -0.0271666
ARHGAP5 Rho GTPase activating protein 5 -0.0267621
RPS11 ribosomal protein S11 -0.0265999
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0264972
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0264914
GCC2 GRIP and coiled-coil domain containing 2 -0.0263161
AFF1 AF4/FMR2 family, member 1 -0.0261613
TMC5 transmembrane channel-like 5 -0.0261076
CMIP c-Maf inducing protein -0.0260368
FDPS farnesyl diphosphate synthase -0.0259687
RHPN2 rhophilin, Rho GTPase binding protein 2 -0.0258184
RSL1D1 ribosomal L1 domain containing 1 -0.025424
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0253383
PDIA3 protein disulfide isomerase family A, member 3 -0.0252249
BIRC6 baculoviral IAP repeat containing 6 -0.0250926
RPL5 ribosomal protein L5 -0.0250909
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0248729
FLNB filamin B, beta -0.0247925
BPTF bromodomain PHD finger transcription factor -0.0245587
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0245084
MAP4 microtubule-associated protein 4 -0.0240321