Tofacitinib_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tofacitinib perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tofacitinib_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FRMD4A FERM domain containing 4A 0.099491
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0913388
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0913043
HMGA2 high mobility group AT-hook 2 0.0671811
HDAC9 histone deacetylase 9 0.0584708
VCL vinculin 0.0577265
INTS6 integrator complex subunit 6 0.0566924
ZSWIM6 zinc finger, SWIM-type containing 6 0.0541003
MYOF myoferlin 0.0479135
TRIO trio Rho guanine nucleotide exchange factor 0.0442231
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0402528
ATXN1 ataxin 1 0.0393804
BICC1 BicC family RNA binding protein 1 0.0377066
LDHA lactate dehydrogenase A 0.0363834
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0359526
CADM1 cell adhesion molecule 1 0.0347916
TMEM132D transmembrane protein 132D 0.0346312
GLIS3 GLIS family zinc finger 3 0.0343511
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.033766
FNIP1 folliculin interacting protein 1 0.0327087
CDH13 cadherin 13 0.0326075
SDK1 sidekick cell adhesion molecule 1 0.0303357
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.02993
DUSP10 dual specificity phosphatase 10 0.0294374
FRMPD4 FERM and PDZ domain containing 4 0.0293092
PDLIM5 PDZ and LIM domain 5 0.0280505
PSD3 pleckstrin and Sec7 domain containing 3 0.027654
ZHX2 zinc fingers and homeoboxes 2 0.0260587
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0257911
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0253627
SLC35F3 solute carrier family 35, member F3 0.025269
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0239911
ZFAND3 zinc finger, AN1-type domain 3 0.0239337
ERBIN erbb2 interacting protein 0.0235744
SQSTM1 sequestosome 1 0.0232443
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0226878
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0224372
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0221125
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0218301
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0216248
GRB10 growth factor receptor-bound protein 10 0.0215976
PRELID2 PRELI domain containing 2 0.0210243
SMYD3 SET and MYND domain containing 3 0.0207146
COL7A1 collagen, type VII, alpha 1 0.0199213
SOX9 SRY (sex determining region Y)-box 9 0.0198293
JAG1 jagged 1 0.0198017
TRIM55 tripartite motif containing 55 0.0190909
AFF3 AF4/FMR2 family, member 3 0.0190702
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0190306
FHIT fragile histidine triad 0.0190129
PLPP4 phospholipid phosphatase 4 0.0182638
UBAP2 ubiquitin associated protein 2 0.0177385
PRKCA protein kinase C, alpha 0.0177374
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0177151
MED13 mediator complex subunit 13 0.0174149
MAPK8 mitogen-activated protein kinase 8 0.0172115
EXOC4 exocyst complex component 4 0.0171545
WWOX WW domain containing oxidoreductase 0.0168808
FBXL7 F-box and leucine-rich repeat protein 7 0.0166223
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0166194
TIMP2 TIMP metallopeptidase inhibitor 2 0.0166073
SVIL supervillin 0.0166036
EXT1 exostosin glycosyltransferase 1 0.0165584
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0165578
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.016551
SMAD2 SMAD family member 2 0.0162861
IARS1 isoleucyl-tRNA synthetase 1 0.0161758
IRS2 insulin receptor substrate 2 0.0160737
ARHGAP24 Rho GTPase activating protein 24 0.0158494
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0157926
USP9X ubiquitin specific peptidase 9, X-linked 0.015777
CREBRF CREB3 regulatory factor 0.0156635
FER fer (fps/fes related) tyrosine kinase 0.0156116
TLE4 transducin-like enhancer of split 4 0.0155096
DTNA dystrobrevin, alpha 0.0152763
TPM1 tropomyosin 1 (alpha) 0.0152219
AUTS2 autism susceptibility candidate 2 0.0149016
DLG1 discs, large homolog 1 (Drosophila) 0.0147839
DDIT3 DNA-damage-inducible transcript 3 0.0147363
SLC38A2 solute carrier family 38, member 2 0.0147013
WDR27 WD repeat domain 27 0.0146163
PTPRK protein tyrosine phosphatase, receptor type, K 0.0142165
WASF1 WAS protein family, member 1 0.0141861
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.014183
UST uronyl-2-sulfotransferase 0.0141606
GPR39 G protein-coupled receptor 39 0.0139254
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0138993
EGFR epidermal growth factor receptor 0.0137658
RPS4X ribosomal protein S4, X-linked 0.0135743
PALLD palladin, cytoskeletal associated protein 0.0135414
FRMD6 FERM domain containing 6 0.0134841
KLHL4 kelch-like family member 4 0.0134329
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0133915
ARHGAP22 Rho GTPase activating protein 22 0.0133801
COG6 component of oligomeric golgi complex 6 0.0133744
ADGRB3 adhesion G protein-coupled receptor B3 0.0131842
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0129153
MBD5 methyl-CpG binding domain protein 5 0.0127379
TENM2 teneurin transmembrane protein 2 0.0126303
TMEM178B transmembrane protein 178B 0.0125572

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.202966
VIM vimentin -0.162679
HLA-B major histocompatibility complex, class I, B -0.146275
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.110024
ELL2 elongation factor, RNA polymerase II, 2 -0.10771
STAT1 signal transducer and activator of transcription 1, 91kDa -0.100908
MT2A metallothionein 2A -0.097581
FN1 fibronectin 1 -0.0865789
UGCG UDP-glucose ceramide glucosyltransferase -0.0830133
B2M beta-2-microglobulin -0.0810118
IGFBP3 insulin-like growth factor binding protein 3 -0.0783155
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0709032
IFI16 interferon, gamma-inducible protein 16 -0.0677999
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0672911
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0667578
TMSB4X thymosin beta 4, X-linked -0.0665235
HLA-E major histocompatibility complex, class I, E -0.0645924
ZMYND8 zinc finger, MYND-type containing 8 -0.0627267
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0621159
MYH9 myosin, heavy chain 9, non-muscle -0.06162
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0615916
BASP1 brain abundant, membrane attached signal protein 1 -0.0605028
NDRG1 N-myc downstream regulated 1 -0.0602937
STC1 stanniocalcin 1 -0.0591074
AKAP12 A kinase (PRKA) anchor protein 12 -0.0589554
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0588293
IFI6 interferon, alpha-inducible protein 6 -0.0562649
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0561994
CDCP1 CUB domain containing protein 1 -0.0535212
RIGI RNA sensor RIG-I -0.0525965
FNDC3B fibronectin type III domain containing 3B -0.0512773
BTG1 B-cell translocation gene 1, anti-proliferative -0.0510397
RPS6 ribosomal protein S6 -0.050804
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0500063
PTMA prothymosin, alpha -0.048618
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0482516
MKI67 marker of proliferation Ki-67 -0.0476218
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0474902
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0467089
ADM adrenomedullin -0.0466649
TPT1 tumor protein, translationally-controlled 1 -0.0462799
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0462677
ZNF292 zinc finger protein 292 -0.0458502
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0446647
MXI1 MAX interactor 1, dimerization protein -0.0441601
ICAM1 intercellular adhesion molecule 1 -0.0430352
IFITM3 interferon induced transmembrane protein 3 -0.0429934
SP100 SP100 nuclear antigen -0.0422337
SOD2 superoxide dismutase 2, mitochondrial -0.0416881
CD44 CD44 molecule (Indian blood group) -0.0415715
PGK1 phosphoglycerate kinase 1 -0.0414017
PLSCR1 phospholipid scramblase 1 -0.0406617
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0404078
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0395425
EIF1 eukaryotic translation initiation factor 1 -0.0394394
IFITM1 interferon induced transmembrane protein 1 -0.0392944
RNF213 ring finger protein 213 -0.0383547
RPS8 ribosomal protein S8 -0.0382334
MX1 MX dynamin-like GTPase 1 -0.0381087
SLC38A1 solute carrier family 38, member 1 -0.0375943
IER3 immediate early response 3 -0.0373891
HLA-A major histocompatibility complex, class I, A -0.0372469
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0369964
CENPF centromere protein F, 350/400kDa -0.0365579
ZNFX1 zinc finger, NFX1-type containing 1 -0.0356406
APP amyloid beta (A4) precursor protein -0.0354267
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0353229
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.03522
IFIH1 interferon induced with helicase C domain 1 -0.0350635
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0349753
NAV2 neuron navigator 2 -0.0348803
ANLN anillin, actin binding protein -0.0345497
ARRDC3 arrestin domain containing 3 -0.0344916
SDC4 syndecan 4 -0.0344639
TPM4 tropomyosin 4 -0.034413
RTN4 reticulon 4 -0.0336082
ENO1 enolase 1, (alpha) -0.0328922
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.032827
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0327633
RPL36A ribosomal protein L36a -0.0325641
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.032554
CTSB cathepsin B -0.032259
OSMR oncostatin M receptor -0.0319636
FTH1 ferritin, heavy polypeptide 1 -0.0312207
RND3 Rho family GTPase 3 -0.0309163
PMP22 peripheral myelin protein 22 -0.0308886
RNF24 ring finger protein 24 -0.0302013
ESYT2 extended synaptotagmin-like protein 2 -0.0300318
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0297878
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0297636
NPEPPS aminopeptidase puromycin sensitive -0.02955
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0295458
EGR1 early growth response 1 -0.0292976
SYAP1 synapse associated protein 1 -0.0291738
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0291638
C3 complement component 3 -0.0291308
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0291051
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0289921
COL1A2 collagen, type I, alpha 2 -0.0287241
RRBP1 ribosome binding protein 1 -0.0284116