Tolcapone_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tolcapone perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tolcapone_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.0945607
CELF2 CUGBP, Elav-like family member 2 0.0933653
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0933612
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0892933
PDE4D phosphodiesterase 4D, cAMP-specific 0.0863209
ZSWIM6 zinc finger, SWIM-type containing 6 0.0787193
RPL19 ribosomal protein L19 0.0744153
TENM3 teneurin transmembrane protein 3 0.0720287
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0666214
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0653594
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0648999
SLC38A2 solute carrier family 38, member 2 0.0635753
HDAC9 histone deacetylase 9 0.0606874
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0606475
PDGFC platelet derived growth factor C 0.0604663
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0595287
PCBP2 poly(rC) binding protein 2 0.0588078
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0570636
HMGA2 high mobility group AT-hook 2 0.056857
GSK3B glycogen synthase kinase 3 beta 0.0530084
MED13L mediator complex subunit 13-like 0.0522134
INTS6 integrator complex subunit 6 0.0496942
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0452699
SPAG9 sperm associated antigen 9 0.0444894
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0437617
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0434271
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0432617
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0427712
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0424553
TPI1 triosephosphate isomerase 1 0.0411283
SETD5 SET domain containing 5 0.0407201
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0403986
DST dystonin 0.0401218
ZFAND3 zinc finger, AN1-type domain 3 0.0399673
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0391667
USP34 ubiquitin specific peptidase 34 0.0390515
CCNL1 cyclin L1 0.0390105
ETNK1 ethanolamine kinase 1 0.0386725
EPHA6 EPH receptor A6 0.0386047
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0367205
MPG N-methylpurine-DNA glycosylase 0.0366961
ADGRG6 adhesion G protein-coupled receptor G6 0.0365287
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0363736
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0363271
USP9X ubiquitin specific peptidase 9, X-linked 0.0362704
SFPQ splicing factor proline/glutamine-rich 0.0361288
SERTAD2 SERTA domain containing 2 0.0357083
ERBIN erbb2 interacting protein 0.0357051
CMIP c-Maf inducing protein 0.0353842
MARCHF4 membrane associated ring-CH-type finger 4 0.0353804
RPL3 ribosomal protein L3 0.0352213
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0347669
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0341662
DENND5A DENN/MADD domain containing 5A 0.0341211
EFNA5 ephrin-A5 0.0337887
VMP1 vacuole membrane protein 1 0.0337579
MSRB3 methionine sulfoxide reductase B3 0.0336836
MMP12 matrix metallopeptidase 12 0.0327737
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0327607
ANKRD17 ankyrin repeat domain 17 0.0325884
KDM5A lysine (K)-specific demethylase 5A 0.0319477
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0319097
WNK1 WNK lysine deficient protein kinase 1 0.0315973
OXR1 oxidation resistance 1 0.0313882
NEK7 NIMA-related kinase 7 0.0311628
BIRC6 baculoviral IAP repeat containing 6 0.0310086
RPS12 ribosomal protein S12 0.0305984
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0301379
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0298878
ZBTB20 zinc finger and BTB domain containing 20 0.0295822
PUM1 pumilio RNA-binding family member 1 0.02934
MEMO1 mediator of cell motility 1 0.0293179
TPM3 tropomyosin 3 0.0292926
TRIO trio Rho guanine nucleotide exchange factor 0.0292784
BIRC3 baculoviral IAP repeat containing 3 0.029079
EXOC6B exocyst complex component 6B 0.029064
PUM2 pumilio RNA-binding family member 2 0.0289825
CARD16 caspase recruitment domain family, member 16 0.0288821
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0287719
MYPN myopalladin 0.0285559
RCOR1 REST corepressor 1 0.0283824
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0283361
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 0.0282583
CSNK1A1 casein kinase 1, alpha 1 0.0281746
TMCC1 transmembrane and coiled-coil domain family 1 0.0279973
MBNL1 muscleblind-like splicing regulator 1 0.0278383
YAP1 Yes-associated protein 1 0.0277355
RAP1B RAP1B, member of RAS oncogene family 0.0274982
TNRC6C trinucleotide repeat containing 6C 0.0274058
AXIN2 axin 2 0.0273319
KDM6A lysine (K)-specific demethylase 6A 0.0271003
PICALM phosphatidylinositol binding clathrin assembly protein 0.0269732
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) 0.0267789
TSC22D2 TSC22 domain family, member 2 0.0267192
PSME4 proteasome (prosome, macropain) activator subunit 4 0.026597
DSCAM Down syndrome cell adhesion molecule 0.0264842
MYH9 myosin, heavy chain 9, non-muscle 0.0262035
AEBP2 AE binding protein 2 0.0257842
NFIB nuclear factor I/B 0.025776
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0256567

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.272401
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.131177
ACTG1 actin gamma 1 -0.115915
VIM vimentin -0.109194
KPNB1 karyopherin (importin) beta 1 -0.0872733
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0775075
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0651691
MKI67 marker of proliferation Ki-67 -0.0633552
IFIH1 interferon induced with helicase C domain 1 -0.0621683
TPT1 tumor protein, translationally-controlled 1 -0.0609748
PTMA prothymosin, alpha -0.0576892
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0566206
RPL35A ribosomal protein L35a -0.0535971
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0443541
CCND1 cyclin D1 -0.0442606
TMEM123 transmembrane protein 123 -0.0440373
SLC38A1 solute carrier family 38, member 1 -0.043797
RPS6 ribosomal protein S6 -0.0432941
S100A10 S100 calcium binding protein A10 -0.0423928
VDAC1 voltage-dependent anion channel 1 -0.0409928
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0406111
TPM4 tropomyosin 4 -0.0390203
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.038425
RPL38 ribosomal protein L38 -0.0383089
CANX calnexin -0.0373365
AHNAK AHNAK nucleoprotein -0.0367713
RSL1D1 ribosomal L1 domain containing 1 -0.0349044
NHSL1 NHS-like 1 -0.0341225
PDIA3 protein disulfide isomerase family A, member 3 -0.0341172
TMEM41B transmembrane protein 41B -0.0338178
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0337189
CAVIN1 caveolae associated protein 1 -0.0331307
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0330681
S100A6 S100 calcium binding protein A6 -0.0320437
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.032031
ASPH aspartate beta-hydroxylase -0.0320251
TM4SF1 transmembrane 4 L six family member 1 -0.0314645
ANXA1 annexin A1 -0.031398
WDR45B WD repeat domain 45B -0.0306874
RPL34 ribosomal protein L34 -0.0305089
BRI3BP BRI3 binding protein -0.0302278
TUBB tubulin, beta class I -0.0300759
HSPB1 heat shock 27kDa protein 1 -0.0298809
DEK DEK proto-oncogene -0.0296503
AKAP12 A kinase (PRKA) anchor protein 12 -0.0294661
RPS27A ribosomal protein S27a -0.0291848
GNAS GNAS complex locus -0.0286796
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0277724
HMGB1 high mobility group box 1 -0.0272616
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0271928
GCG glucagon -0.026996
FAM110C family with sequence similarity 110, member C -0.0265102
UBTF upstream binding transcription factor, RNA polymerase I -0.026366
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0262881
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0261204
RPS13 ribosomal protein S13 -0.025672
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0253237
MYL12B myosin, light chain 12B, regulatory -0.0250925
RAB1A RAB1A, member RAS oncogene family -0.0250842
MTAP methylthioadenosine phosphorylase -0.0244487
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0243627
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) -0.0243338
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0241514
ZFR zinc finger RNA binding protein -0.0239353
RPS15 ribosomal protein S15 -0.0233632
FUS FUS RNA binding protein -0.0233248
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0231295
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0227201
PA2G4 proliferation-associated 2G4, 38kDa -0.0226655
EPCAM epithelial cell adhesion molecule -0.022658
CENPF centromere protein F, 350/400kDa -0.0226308
WSB1 WD repeat and SOCS box containing 1 -0.0224546
KIF18B kinesin family member 18B -0.0224182
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0222841
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0215351
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0214401
MATR3 matrin 3 -0.0213291
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0207923
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0205069
H1-0 H1.0 linker histone -0.0204585
PRR11 proline rich 11 -0.0198862
PRDX1 peroxiredoxin 1 -0.0197894
SRP72 signal recognition particle 72kDa -0.0197725
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0196528
RPL37 ribosomal protein L37 -0.0193885
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa -0.0187607
RACK1 receptor for activated C kinase 1 -0.0187429
NAV3 neuron navigator 3 -0.018648
RPS29 ribosomal protein S29 -0.0183368
NAP1L1 nucleosome assembly protein 1-like 1 -0.0181607
UBB ubiquitin B -0.0180764
SMC4 structural maintenance of chromosomes 4 -0.0179952
LMAN1 lectin, mannose-binding, 1 -0.0179839
RPLP0 ribosomal protein, large, P0 -0.0178895
RPL6 ribosomal protein L6 -0.0176934
RPS21 ribosomal protein S21 -0.017542
RPS24 ribosomal protein S24 -0.0174898
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0174507
PPM1G protein phosphatase, Mg2+/Mn2+ dependent, 1G -0.0171332
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0171164