Tolcapone_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tolcapone perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tolcapone_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DST dystonin 0.0645264
MACF1 microtubule-actin crosslinking factor 1 0.0607071
WWTR1 WW domain containing transcription regulator 1 0.0605978
BCAR3 breast cancer anti-estrogen resistance 3 0.0553446
PSD3 pleckstrin and Sec7 domain containing 3 0.0549092
CAPRIN2 caprin family member 2 0.0537587
RPL19 ribosomal protein L19 0.0448827
ZBTB38 zinc finger and BTB domain containing 38 0.0369362
FMNL2 formin-like 2 0.0366618
VCL vinculin 0.0348553
ZSWIM6 zinc finger, SWIM-type containing 6 0.0334683
NPAS2 neuronal PAS domain protein 2 0.0327866
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0318251
TM4SF1 transmembrane 4 L six family member 1 0.0314885
LOXL2 lysyl oxidase-like 2 0.0299508
SPAG9 sperm associated antigen 9 0.0289057
MYH9 myosin, heavy chain 9, non-muscle 0.0288353
CMIP c-Maf inducing protein 0.0287157
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0281032
NCEH1 neutral cholesterol ester hydrolase 1 0.0275862
SMAD3 SMAD family member 3 0.0260234
APLP2 amyloid beta (A4) precursor-like protein 2 0.0251801
ERRFI1 ERBB receptor feedback inhibitor 1 0.0250988
DSCAM Down syndrome cell adhesion molecule 0.0244906
BIRC3 baculoviral IAP repeat containing 3 0.0231859
RCOR1 REST corepressor 1 0.0231611
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0228494
INTS6 integrator complex subunit 6 0.02268
CFLAR CASP8 and FADD-like apoptosis regulator 0.0216909
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0206255
HOMER1 homer scaffolding protein 1 0.0203208
SDCCAG8 serologically defined colon cancer antigen 8 0.0200152
PRELID2 PRELI domain containing 2 0.0199514
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0198298
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0197711
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0194772
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.01872
ARHGAP5 Rho GTPase activating protein 5 0.0187167
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0182638
NEK10 NIMA-related kinase 10 0.0177107
TRIP12 thyroid hormone receptor interactor 12 0.0176652
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0173554
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0173282
USP12 ubiquitin specific peptidase 12 0.0173145
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0171969
SVIL supervillin 0.0170595
RUNX1 runt-related transcription factor 1 0.0169357
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0167262
RAD51B RAD51 paralog B 0.0165901
TXNRD1 thioredoxin reductase 1 0.0162811
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0161787
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0161045
AREG amphiregulin 0.0160957
MYOF myoferlin 0.0159515
TRIO trio Rho guanine nucleotide exchange factor 0.0159065
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0150409
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0150128
MBD5 methyl-CpG binding domain protein 5 0.0149251
MCL1 myeloid cell leukemia 1 0.0149039
CAPN2 calpain 2, (m/II) large subunit 0.0142677
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0141229
ZEB1 zinc finger E-box binding homeobox 1 0.0140688
KDM4C lysine (K)-specific demethylase 4C 0.0140557
SOX9 SRY (sex determining region Y)-box 9 0.0138896
MB21D2 Mab-21 domain containing 2 0.0138752
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0138343
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0138157
ADARB1 adenosine deaminase, RNA-specific, B1 0.0138024
JMJD1C jumonji domain containing 1C 0.0134346
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0134133
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0133339
RPS12 ribosomal protein S12 0.0131959
FNIP1 folliculin interacting protein 1 0.0131829
EMP1 epithelial membrane protein 1 0.013181
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0131775
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0130476
PDLIM5 PDZ and LIM domain 5 0.0126398
WDR27 WD repeat domain 27 0.012576
PLEC plectin 0.0124103
GLS2 glutaminase 2 (liver, mitochondrial) 0.0123764
KDM4B lysine (K)-specific demethylase 4B 0.0123537
CSNK1A1 casein kinase 1, alpha 1 0.0123412
SFPQ splicing factor proline/glutamine-rich 0.0122863
CEP250 centrosomal protein 250kDa 0.0121883
PIEZO1 piezo-type mechanosensitive ion channel component 1 0.0121847
PYGB phosphorylase, glycogen; brain 0.0119413
SND1 staphylococcal nuclease and tudor domain containing 1 0.0118913
TOP1 topoisomerase (DNA) I 0.0117855
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0117171
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0117046
DIAPH1 diaphanous-related formin 1 0.0115987
SPTBN1 spectrin, beta, non-erythrocytic 1 0.011502
CAMTA1 calmodulin binding transcription activator 1 0.0114361
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0114039
USP9X ubiquitin specific peptidase 9, X-linked 0.0113462
HDLBP high density lipoprotein binding protein 0.0112615
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0111948
HSPA8 heat shock 70kDa protein 8 0.0111615
EZR ezrin 0.0111593
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0111324

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.200687
POTEF POTE ankyrin domain family, member F -0.0806045
PTMA prothymosin, alpha -0.0622006
HLA-B major histocompatibility complex, class I, B -0.0571353
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.047417
TMSB10 thymosin beta 10 -0.0409233
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0371044
RPS6 ribosomal protein S6 -0.036708
DLG1 discs, large homolog 1 (Drosophila) -0.0349448
FTH1 ferritin, heavy polypeptide 1 -0.0331928
RPL35A ribosomal protein L35a -0.0316084
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0302987
ZMYND8 zinc finger, MYND-type containing 8 -0.0301731
ACTG1 actin gamma 1 -0.0269887
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0258199
WSB1 WD repeat and SOCS box containing 1 -0.0246322
FTL ferritin, light polypeptide -0.0230339
KPNB1 karyopherin (importin) beta 1 -0.0221937
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0213881
VDAC1 voltage-dependent anion channel 1 -0.0210341
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.020972
CD44 CD44 molecule (Indian blood group) -0.0209631
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0208245
TP63 tumor protein p63 -0.0206296
EGR1 early growth response 1 -0.0201772
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0201727
NPEPPS aminopeptidase puromycin sensitive -0.0192725
VIM vimentin -0.0184187
PTPRF protein tyrosine phosphatase, receptor type, F -0.0178679
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0178325
TNS3 tensin 3 -0.0178053
TAPBP TAP binding protein (tapasin) -0.0174819
RPS19 ribosomal protein S19 -0.0173255
RPS13 ribosomal protein S13 -0.0170744
RIGI RNA sensor RIG-I -0.0167926
B2M beta-2-microglobulin -0.0162896
GNAS GNAS complex locus -0.0160935
RBM25 RNA binding motif protein 25 -0.0158153
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0153966
ZNF148 zinc finger protein 148 -0.0151789
MT1E metallothionein 1E -0.014957
EEF2 eukaryotic translation elongation factor 2 -0.0148522
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.014836
ADAM10 ADAM metallopeptidase domain 10 -0.0147845
THOC2 THO complex 2 -0.0147349
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0147096
S100A9 S100 calcium binding protein A9 -0.0147022
LDHA lactate dehydrogenase A -0.0145765
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0145485
WASF2 WAS protein family, member 2 -0.0144653
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0142947
TMSB4X thymosin beta 4, X-linked -0.0140951
PTK2 protein tyrosine kinase 2 -0.0140381
PFN1 profilin 1 -0.0140341
MATR3 matrin 3 -0.0139266
CANX calnexin -0.0139188
EIF3M eukaryotic translation initiation factor 3, subunit M -0.0138279
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.013795
EFNA5 ephrin-A5 -0.0137224
IFIH1 interferon induced with helicase C domain 1 -0.0136777
RPL28 ribosomal protein L28 -0.0135274
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0132762
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0132621
CADM2 cell adhesion molecule 2 -0.0132618
MYADM myeloid-associated differentiation marker -0.0131917
FAF1 Fas (TNFRSF6) associated factor 1 -0.0128508
IFITM1 interferon induced transmembrane protein 1 -0.0128271
CENPF centromere protein F, 350/400kDa -0.0127661
SEPTIN7 septin 7 -0.0127097
PKM pyruvate kinase, muscle -0.0127095
RPS21 ribosomal protein S21 -0.012695
LOC112694756 uncharaterized LOC112694756 -0.0125855
RLF rearranged L-myc fusion -0.0125635
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.012518
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0124327
RBMX RNA binding motif protein, X-linked -0.0123345
EPHA4 EPH receptor A4 -0.0122938
NIPSNAP2 nipsnap homolog 2 -0.0122487
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0122244
DPH6 diphthamine biosynthesis 6 -0.0120927
TTC28 tetratricopeptide repeat domain 28 -0.0120778
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0120511
TMEM123 transmembrane protein 123 -0.0119639
ENO1 enolase 1, (alpha) -0.0119492
RPL8 ribosomal protein L8 -0.0119076
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0118556
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0116852
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 -0.0116574
HLA-A major histocompatibility complex, class I, A -0.0116403
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0115394
HSPB1 heat shock 27kDa protein 1 -0.0113852
NOP58 NOP58 ribonucleoprotein -0.0112401
LY6E lymphocyte antigen 6 complex, locus E -0.0111476
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0111026
SEC24A SEC24 family member A -0.0110486
ALDH7A1 aldehyde dehydrogenase 7 family, member A1 -0.0109989
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.010907
TCERG1 transcription elongation regulator 1 -0.0108977
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0108972
ASTN2 astrotactin 2 -0.0108968