Tolcapone_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tolcapone perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tolcapone_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.137108
GRAMD1B GRAM domain containing 1B 0.105267
DOCK5 dedicator of cytokinesis 5 0.0860954
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.079271
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0759334
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0708275
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0686034
INTS6 integrator complex subunit 6 0.0664187
PDLIM5 PDZ and LIM domain 5 0.0656803
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0630477
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0618766
RAB7A RAB7A, member RAS oncogene family 0.061398
ELL2 elongation factor, RNA polymerase II, 2 0.0595447
VCL vinculin 0.0583049
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0571331
ZFAND3 zinc finger, AN1-type domain 3 0.0542987
ZSWIM6 zinc finger, SWIM-type containing 6 0.0496538
PCBP2 poly(rC) binding protein 2 0.0484649
CLIP1 CAP-GLY domain containing linker protein 1 0.0482879
FBXO11 F-box protein 11 0.0480822
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0475781
NIPBL Nipped-B homolog (Drosophila) 0.0475537
SFPQ splicing factor proline/glutamine-rich 0.0473616
TRIP12 thyroid hormone receptor interactor 12 0.0457002
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0456732
EXOC6B exocyst complex component 6B 0.0447528
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0432246
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0431225
MCL1 myeloid cell leukemia 1 0.0428522
WNK1 WNK lysine deficient protein kinase 1 0.0426042
WWOX WW domain containing oxidoreductase 0.0414437
HOMER1 homer scaffolding protein 1 0.0407021
CDK17 cyclin-dependent kinase 17 0.0401488
ADIPOR2 adiponectin receptor 2 0.0399328
IGF1R insulin-like growth factor 1 receptor 0.0393097
SND1 staphylococcal nuclease and tudor domain containing 1 0.0387928
MCTP1 multiple C2 domains, transmembrane 1 0.0386995
PRKCE protein kinase C, epsilon 0.0375879
JMJD1C jumonji domain containing 1C 0.0375394
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0373323
SPRED2 sprouty-related, EVH1 domain containing 2 0.0372173
GSK3B glycogen synthase kinase 3 beta 0.0369288
SETX senataxin 0.0368726
THSD4 thrombospondin, type I, domain containing 4 0.0364713
ANKRD17 ankyrin repeat domain 17 0.0364694
CNOT4 CCR4-NOT transcription complex, subunit 4 0.036016
EXT1 exostosin glycosyltransferase 1 0.0355853
CALD1 caldesmon 1 0.0353732
ATF6 activating transcription factor 6 0.0353074
SETD5 SET domain containing 5 0.0348012
SPAG9 sperm associated antigen 9 0.0336513
RICTOR RPTOR independent companion of MTOR, complex 2 0.0336121
YAP1 Yes-associated protein 1 0.0333956
DST dystonin 0.0331538
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0330863
NLGN1 neuroligin 1 0.0326671
DSCAM Down syndrome cell adhesion molecule 0.0323111
NCAPG2 non-SMC condensin II complex, subunit G2 0.0322716
SLC38A2 solute carrier family 38, member 2 0.0314412
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0312176
CUL3 cullin 3 0.0311572
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0303794
ZFC3H1 zinc finger, C3H1-type containing 0.0303215
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0297083
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.029571
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0293047
TXNRD1 thioredoxin reductase 1 0.0286222
HDAC9 histone deacetylase 9 0.0284361
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0283126
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.028176
ETNK1 ethanolamine kinase 1 0.0280074
WDR43 WD repeat domain 43 0.0279963
NF1 neurofibromin 1 0.0279903
MARCHF4 membrane associated ring-CH-type finger 4 0.0278758
EXOC4 exocyst complex component 4 0.0278649
N4BP2L2 NEDD4 binding protein 2-like 2 0.0278373
NBAS neuroblastoma amplified sequence 0.0277059
VMP1 vacuole membrane protein 1 0.0276841
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0275759
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0275038
MED13 mediator complex subunit 13 0.0274754
RRM2 ribonucleotide reductase M2 0.0271481
SNAP25 synaptosomal-associated protein, 25kDa 0.027009
PUM2 pumilio RNA-binding family member 2 0.0269589
CPNE1 copine I 0.0267377
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0265198
TRA2A transformer 2 alpha homolog (Drosophila) 0.0265079
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0264079
MMP12 matrix metallopeptidase 12 0.0261474
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0260797
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0259982
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0259714
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0258834
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0258653
RBM39 RNA binding motif protein 39 0.0255527
CAPRIN2 caprin family member 2 0.0254904
TBK1 TANK-binding kinase 1 0.0254345
SVIL supervillin 0.0252587
RCOR1 REST corepressor 1 0.0252328
FLNA filamin A, alpha 0.0249139

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.194072
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.12958
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0982931
VIM vimentin -0.0882994
PTMA prothymosin, alpha -0.0703249
TMSB10 thymosin beta 10 -0.0655555
RPL37 ribosomal protein L37 -0.0655449
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0608521
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0603671
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0603354
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0567876
RPS3 ribosomal protein S3 -0.0565983
KTN1 kinectin 1 (kinesin receptor) -0.05533
RPS27 ribosomal protein S27 -0.0547321
MT2A metallothionein 2A -0.0538914
RPS8 ribosomal protein S8 -0.0528258
RPL26 ribosomal protein L26 -0.0512329
AHNAK AHNAK nucleoprotein -0.0467066
RPL37A ribosomal protein L37a -0.044801
RPS12 ribosomal protein S12 -0.042589
ACTG1 actin gamma 1 -0.0416962
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0412254
CANX calnexin -0.0385611
RPLP1 ribosomal protein, large, P1 -0.0368882
TPI1 triosephosphate isomerase 1 -0.0350778
SBF2 SET binding factor 2 -0.0345007
RPL12 ribosomal protein L12 -0.0343913
RPL19 ribosomal protein L19 -0.0340748
RPS6 ribosomal protein S6 -0.0338608
RSF1 remodeling and spacing factor 1 -0.0322849
RACK1 receptor for activated C kinase 1 -0.0319294
RPL31 ribosomal protein L31 -0.0317146
TPT1 tumor protein, translationally-controlled 1 -0.0317102
RPS29 ribosomal protein S29 -0.0313625
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0309923
RPL35A ribosomal protein L35a -0.0305657
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0304616
EGR1 early growth response 1 -0.0296778
RPS19 ribosomal protein S19 -0.0286079
ENO1 enolase 1, (alpha) -0.0284729
PGK1 phosphoglycerate kinase 1 -0.0281855
RPL36 ribosomal protein L36 -0.0278532
FTL ferritin, light polypeptide -0.0278385
NAP1L1 nucleosome assembly protein 1-like 1 -0.0278006
RSL1D1 ribosomal L1 domain containing 1 -0.0276076
KMT2A lysine (K)-specific methyltransferase 2A -0.027538
HLA-B major histocompatibility complex, class I, B -0.0270797
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0270165
EIF1 eukaryotic translation initiation factor 1 -0.0269675
ZMYND8 zinc finger, MYND-type containing 8 -0.0268797
RPS24 ribosomal protein S24 -0.0265058
TFPI2 tissue factor pathway inhibitor 2 -0.0263004
WSB1 WD repeat and SOCS box containing 1 -0.0257478
KRT18 keratin 18, type I -0.0255854
RPS27A ribosomal protein S27a -0.0252782
RPL34 ribosomal protein L34 -0.0248221
RPLP2 ribosomal protein, large, P2 -0.024612
EEF1G eukaryotic translation elongation factor 1 gamma -0.0243212
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.024201
NACA nascent polypeptide-associated complex alpha subunit -0.0241439
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0241103
RPL5 ribosomal protein L5 -0.0240042
RPL23 ribosomal protein L23 -0.0238317
SET SET nuclear proto-oncogene -0.023791
LOC102724023 ES1 protein homolog, mitochondrial -0.0236085
CALR calreticulin -0.0227007
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0223918
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0219352
CAVIN1 caveolae associated protein 1 -0.0218319
TMEM165 transmembrane protein 165 -0.0216631
NAMPT nicotinamide phosphoribosyltransferase -0.0216432
ENOSF1 enolase superfamily member 1 -0.0216242
IFI6 interferon, alpha-inducible protein 6 -0.0214068
PDIA3 protein disulfide isomerase family A, member 3 -0.0213382
HLA-E major histocompatibility complex, class I, E -0.0212749
LMAN1 lectin, mannose-binding, 1 -0.0212212
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0212029
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0211416
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0211059
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0208915
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0207923
RPS21 ribosomal protein S21 -0.0207339
IER3 immediate early response 3 -0.0207191
H1-0 H1.0 linker histone -0.0206767
SCAF11 SR-related CTD-associated factor 11 -0.0206432
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0206088
RPS25 ribosomal protein S25 -0.0204976
RPL35 ribosomal protein L35 -0.0203067
RPL38 ribosomal protein L38 -0.0198548
MAP4 microtubule-associated protein 4 -0.0198063
S100A10 S100 calcium binding protein A10 -0.0197469
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.0196331
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) -0.0194849
BRWD3 bromodomain and WD repeat domain containing 3 -0.0194178
LOC112694756 uncharaterized LOC112694756 -0.0193497
RPL8 ribosomal protein L8 -0.0193152
YBX1 Y box binding protein 1 -0.0192685
RPS14 ribosomal protein S14 -0.0191961
KDM3A lysine (K)-specific demethylase 3A -0.0190104
EML4 echinoderm microtubule associated protein like 4 -0.0189766