Tolmetin_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tolmetin perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tolmetin_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.113157
AREG amphiregulin 0.100877
KDM3A lysine (K)-specific demethylase 3A 0.0716926
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0677073
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0636021
ERRFI1 ERBB receptor feedback inhibitor 1 0.0611778
PDE4D phosphodiesterase 4D, cAMP-specific 0.0609709
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0609427
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0608861
EIF1 eukaryotic translation initiation factor 1 0.0593792
MYH9 myosin, heavy chain 9, non-muscle 0.057526
RPL3 ribosomal protein L3 0.0484567
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0483926
TPM3 tropomyosin 3 0.0481506
PDGFC platelet derived growth factor C 0.0478558
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0470728
CPOX coproporphyrinogen oxidase 0.0464939
RPS2 ribosomal protein S2 0.0443742
SRRM2 serine/arginine repetitive matrix 2 0.0405541
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0401771
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0397739
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0389107
BIRC2 baculoviral IAP repeat containing 2 0.0386624
ASPH aspartate beta-hydroxylase 0.0372125
NEK7 NIMA-related kinase 7 0.0368624
EIF4A2 eukaryotic translation initiation factor 4A2 0.0367505
YEATS2 YEATS domain containing 2 0.0359557
PNN pinin, desmosome associated protein 0.0358387
TENM3 teneurin transmembrane protein 3 0.035403
TXNRD1 thioredoxin reductase 1 0.0348537
XPO1 exportin 1 0.0344182
NFE2L1 nuclear factor, erythroid 2-like 1 0.0333874
ZNF217 zinc finger protein 217 0.033366
CPNE1 copine I 0.033117
TNPO1 transportin 1 0.0330406
APP amyloid beta (A4) precursor protein 0.0329649
ANKRD36 ankyrin repeat domain 36 0.0327208
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0317943
AHNAK AHNAK nucleoprotein 0.0309366
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0309147
SET SET nuclear proto-oncogene 0.0303377
KLC1 kinesin light chain 1 0.0301676
ANXA1 annexin A1 0.0298393
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0292199
SMYD3 SET and MYND domain containing 3 0.0290654
EZR ezrin 0.0290227
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0287551
MATR3 matrin 3 0.0286137
RPS12 ribosomal protein S12 0.0282591
HSPA8 heat shock 70kDa protein 8 0.0281923
RPS19 ribosomal protein S19 0.0281125
DSPP dentin sialophosphoprotein 0.0274694
THOC1 THO complex 1 0.0274417
ECT2 epithelial cell transforming 2 0.0271628
XPOT exportin, tRNA 0.0270252
MTAP methylthioadenosine phosphorylase 0.0270197
STMN1 stathmin 1 0.0268929
USP9X ubiquitin specific peptidase 9, X-linked 0.0265937
NKTR natural killer cell triggering receptor 0.0265474
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0262602
DSCAM Down syndrome cell adhesion molecule 0.0261927
PDE4B phosphodiesterase 4B, cAMP-specific 0.025918
PNISR PNN-interacting serine/arginine-rich protein 0.025492
RPL4 ribosomal protein L4 0.0252052
SLC38A2 solute carrier family 38, member 2 0.0250989
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0243836
PLEC plectin 0.024153
TM9SF3 transmembrane 9 superfamily member 3 0.0237468
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.0234932
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0233718
NCKAP1 NCK-associated protein 1 0.0232519
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0230279
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0229224
NARS1 asparaginyl-tRNA synthetase 1 0.0228573
RPS15A ribosomal protein S15a 0.022794
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0227181
RASA2 RAS p21 protein activator 2 0.022507
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0224298
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0224041
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0223664
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0223601
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 0.0223505
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0223037
GASK1B golgi associated kinase 1B 0.0222934
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0222013
RPS27A ribosomal protein S27a 0.0218201
AFDN afadin, adherens junction formation factor 0.0216604
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0216251
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0215649
RIMKLB ribosomal modification protein rimK-like family member B 0.0214685
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0212476
FAR1 fatty acyl CoA reductase 1 0.0212127
CLTC clathrin, heavy chain (Hc) 0.0212037
YME1L1 YME1-like 1 ATPase 0.0211535
RPS6 ribosomal protein S6 0.0210846
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 0.0207824
MED13L mediator complex subunit 13-like 0.0206973
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.0206392
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0206357
CCNL1 cyclin L1 0.0206073

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.401919
VIM vimentin -0.260844
NLGN1 neuroligin 1 -0.155512
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.150881
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.135345
RAB7A RAB7A, member RAS oncogene family -0.120244
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.116475
HMGA2 high mobility group AT-hook 2 -0.0940855
EGR1 early growth response 1 -0.0734378
HMGA1 high mobility group AT-hook 1 -0.0629158
HSPB1 heat shock 27kDa protein 1 -0.0612335
ATP5F1B ATP synthase F1 subunit beta -0.0606808
ACTG1 actin gamma 1 -0.0586545
EHBP1 EH domain binding protein 1 -0.0553103
TUBA1B tubulin, alpha 1b -0.0535537
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0535497
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0518904
ADIPOR2 adiponectin receptor 2 -0.049722
FTL ferritin, light polypeptide -0.0491767
POTEF POTE ankyrin domain family, member F -0.0478839
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0475816
ZNF804A zinc finger protein 804A -0.0475581
LOC102724023 ES1 protein homolog, mitochondrial -0.0464798
PFN1 profilin 1 -0.0452493
INTS6 integrator complex subunit 6 -0.0448618
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0437751
S100A6 S100 calcium binding protein A6 -0.0435659
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0417898
LDHA lactate dehydrogenase A -0.0401215
CCND1 cyclin D1 -0.0395566
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0358394
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0358126
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0351573
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.034968
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0348667
RHOA ras homolog family member A -0.0346229
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0342863
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0339093
NHSL1 NHS-like 1 -0.0336285
MSRB3 methionine sulfoxide reductase B3 -0.0333577
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0329747
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0328893
FBXO11 F-box protein 11 -0.0313868
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0313008
AFF4 AF4/FMR2 family, member 4 -0.0312977
RASAL2 RAS protein activator like 2 -0.0312569
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0310506
MMP12 matrix metallopeptidase 12 -0.0302967
LRRC23 leucine rich repeat containing 23 -0.0300001
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0299644
CSMD3 CUB and Sushi multiple domains 3 -0.02948
RAB1A RAB1A, member RAS oncogene family -0.0293158
ZNF638 zinc finger protein 638 -0.029235
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0291944
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.028778
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0287125
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0278316
RAB10 RAB10, member RAS oncogene family -0.0276176
DTNA dystrobrevin, alpha -0.0275222
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0274756
PCDH9 protocadherin 9 -0.0272509
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) -0.0272308
SYT1 synaptotagmin I -0.0269559
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0269014
TNRC6B trinucleotide repeat containing 6B -0.0268769
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0267776
TAPBP TAP binding protein (tapasin) -0.026097
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0260818
ANKRD17 ankyrin repeat domain 17 -0.0259639
MGAT4C MGAT4 family, member C -0.0258974
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0258958
NUP98 nucleoporin 98kDa -0.0257863
VDAC1 voltage-dependent anion channel 1 -0.0256752
PCDH7 protocadherin 7 -0.02558
TUBB tubulin, beta class I -0.0255507
GSK3B glycogen synthase kinase 3 beta -0.0254839
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0253376
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0252998
GNAS GNAS complex locus -0.0252918
TSC22D2 TSC22 domain family, member 2 -0.0252254
KPNB1 karyopherin (importin) beta 1 -0.0251416
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0251219
PHACTR4 phosphatase and actin regulator 4 -0.025114
MBNL1 muscleblind-like splicing regulator 1 -0.0250174
KDM2A lysine (K)-specific demethylase 2A -0.0250156
DCAF7 DDB1 and CUL4 associated factor 7 -0.0248033
PCF11 PCF11 cleavage and polyadenylation factor subunit -0.024468
PEG10 paternally expressed 10 -0.0243534
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0243458
CUX1 cut-like homeobox 1 -0.0243396
DDIT3 DNA-damage-inducible transcript 3 -0.0242843
JMJD1C jumonji domain containing 1C -0.0242298
S100A10 S100 calcium binding protein A10 -0.0237551
UBE2B ubiquitin-conjugating enzyme E2B -0.0227039
ERBIN erbb2 interacting protein -0.0225975
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0224565
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0222934
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.022198
BCL6 B-cell CLL/lymphoma 6 -0.0220803
ZMYM4 zinc finger, MYM-type 4 -0.0219955